RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 MAST3O60307 1309 aa7.32□□□□□ -1.24
CHD6-204ENST00000440647 PTPRCP08575 1304 aa7.32□□□□□ -1.24
CHD6-204ENST00000440647 USP2O75604 605 aaPredicted RBP7.32□□□□□ -1.24
CHD6-204ENST00000440647 UBOX5O94941 541 aa7.32□□□□□ -1.24
CHD6-204ENST00000440647 NBPF7P0C2Y1 421 aaPredicted RBP7.32□□□□□ -1.24
CHD6-204ENST00000440647 RACK1P63244 317 aaKnown RBP7.32□□□□□ -1.24
CHD6-204ENST00000440647 CRHR2Q13324 411 aa7.32□□□□□ -1.24
CHD6-204ENST00000440647 GAB4Q2WGN9 574 aa7.32□□□□□ -1.24
CHD6-204ENST00000440647 OVOS1Q6IE37 1185 aa7.32□□□□□ -1.24
CHD6-204ENST00000440647 TSPYL5Q86VY4 417 aaPredicted RBP7.32□□□□□ -1.24
CHD6-204ENST00000440647 TEKT1Q969V4 418 aa7.32□□□□□ -1.24
CHD6-204ENST00000440647 MRRFQ96E11 262 aaKnown RBP7.32□□□□□ -1.24
CHD6-204ENST00000440647 CCDC120Q96HB5 630 aa7.32□□□□□ -1.24
CHD6-204ENST00000440647 FAM84BQ96KN1 310 aaPredicted RBP7.32□□□□□ -1.24
CHD6-204ENST00000440647 ALPK1Q96QP1 1244 aa7.32□□□□□ -1.24
CHD6-204ENST00000440647 PUS3Q9BZE2 481 aaKnown RBP7.32□□□□□ -1.24
CHD6-204ENST00000440647 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.32□□□□□ -1.248e-7■□□□□ 9.4
CHD6-204ENST00000440647 R3HDMLQ9H3Y0 253 aa7.32□□□□□ -1.24
CHD6-204ENST00000440647 DDX41Q9UJV9 622 aaKnown RBP7.32□□□□□ -1.24
CHD6-204ENST00000440647 PCDHGB7Q9Y5F8 929 aa7.32□□□□□ -1.24
CHD6-204ENST00000440647 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.32□□□□□ -1.24
CHD6-204ENST00000440647 UTYO14607 1347 aa7.31□□□□□ -1.24
CHD6-204ENST00000440647 AOX1Q06278 1338 aa7.31□□□□□ -1.24
CHD6-204ENST00000440647 RBBP6Q7Z6E9 1792 aaKnown RBP7.31□□□□□ -1.24
CHD6-204ENST00000440647 AK9Q5TCS8 1911 aa7.31□□□□□ -1.24
CHD6-204ENST00000440647 PDE8BO95263 885 aa7.31□□□□□ -1.24
CHD6-204ENST00000440647 IFIT1P09914 478 aaKnown RBP7.31□□□□□ -1.24
CHD6-204ENST00000440647 CCNFP41002 786 aa7.31□□□□□ -1.24
CHD6-204ENST00000440647 AFMP43652 599 aa7.31□□□□□ -1.24
CHD6-204ENST00000440647 ARHGEF6Q15052 776 aa7.31□□□□□ -1.24
CHD6-204ENST00000440647 LRRC24Q50LG9 513 aa7.31□□□□□ -1.24
CHD6-204ENST00000440647 INTS3Q68E01 1043 aaKnown RBP7.31□□□□□ -1.24
CHD6-204ENST00000440647 NOL8Q76FK4 1167 aaKnown RBP7.31□□□□□ -1.24
CHD6-204ENST00000440647 OTOP1Q7RTM1 612 aa7.31□□□□□ -1.24
CHD6-204ENST00000440647 NLRC3Q7RTR2 1065 aa7.31□□□□□ -1.24
CHD6-204ENST00000440647 CREG2Q8IUH2 290 aa7.31□□□□□ -1.24
CHD6-204ENST00000440647 CD99L2Q8TCZ2 262 aa7.31□□□□□ -1.24
CHD6-204ENST00000440647 HOOK2Q96ED9 719 aa7.31□□□□□ -1.24
CHD6-204ENST00000440647 TMEM39BQ9GZU3 492 aa7.31□□□□□ -1.24
CHD6-204ENST00000440647 RIPOR2Q9Y4F9 1068 aa7.31□□□□□ -1.24
CHD6-204ENST00000440647 CCL15-CCL14A0A0B4J2E2 113 aa7.3□□□□□ -1.24
CHD6-204ENST00000440647 SLC5A1P13866 664 aa7.3□□□□□ -1.24
CHD6-204ENST00000440647 NME1P15531 152 aaKnown RBP7.3□□□□□ -1.24
CHD6-204ENST00000440647 GDNFP39905 211 aa7.3□□□□□ -1.24
CHD6-204ENST00000440647 GTF2A2P52657 109 aa7.3□□□□□ -1.24
CHD6-204ENST00000440647 HDLBPQ00341 1268 aaKnown RBP7.3□□□□□ -1.24
CHD6-204ENST00000440647 SP3Q02447 781 aa7.3□□□□□ -1.24
CHD6-204ENST00000440647 RAD51AP2Q09MP3 1159 aa7.3□□□□□ -1.24
CHD6-204ENST00000440647 VGLL4Q14135 290 aa7.3□□□□□ -1.24
CHD6-204ENST00000440647 PUM3Q15397 648 aaKnown RBP7.3□□□□□ -1.24
CHD6-204ENST00000440647 CCL15Q16663 113 aa7.3□□□□□ -1.24
CHD6-204ENST00000440647 RABL6Q3YEC7 729 aaPredicted RBP7.3□□□□□ -1.24
CHD6-204ENST00000440647 LCE1DQ5T752 114 aa7.3□□□□□ -1.24
CHD6-204ENST00000440647 KAZALD1Q96I82 304 aa7.3□□□□□ -1.24
CHD6-204ENST00000440647 FAM84AQ96KN4 292 aa7.3□□□□□ -1.24
CHD6-204ENST00000440647 ANTXR1Q9H6X2 564 aa7.3□□□□□ -1.24
CHD6-204ENST00000440647 C19orf73Q9NVV2 129 aa7.3□□□□□ -1.24
CHD6-204ENST00000440647 DUSP13Q9UII6 198 aa7.3□□□□□ -1.24
CHD6-204ENST00000440647 KIF16BQ96L93 1317 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 ANKRD62A6NC57 917 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 MEIS3P2A8K0S8 358 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 CACNB3P54284 484 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 RNF4P78317 190 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 SETQ01105 290 aaPredicted RBP7.29□□□□□ -1.24
CHD6-204ENST00000440647 KIF22Q14807 665 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 DCAF15Q66K64 600 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 METTL16Q86W50 562 aaKnown RBP7.29□□□□□ -1.24
CHD6-204ENST00000440647 ZNF654Q8IZM8 581 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 ANKRD44Q8N8A2 993 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 BHLHE22Q8NFJ8 381 aaPredicted RBP7.29□□□□□ -1.24
CHD6-204ENST00000440647 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.29□□□□□ -1.24
CHD6-204ENST00000440647 KLHDC4Q8TBB5 520 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 ZDHHC15Q96MV8 337 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 TEPSINQ96N21 525 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 WRNIP1Q96S55 665 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 SMC4Q9NTJ3 1288 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 KIAA1522Q9P206 1035 aaPredicted RBP7.29□□□□□ -1.24
CHD6-204ENST00000440647 PTPN22Q9Y2R2 807 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 SUGT1Q9Y2Z0 365 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 DOCK2Q92608 1830 aa7.29□□□□□ -1.24
CHD6-204ENST00000440647 ZNF521Q96K83 1311 aa7.28□□□□□ -1.24
CHD6-204ENST00000440647 LOC102724159A0A0B4J2E5 919 aa7.28□□□□□ -1.24
CHD6-204ENST00000440647 LRRC10BA6NIK2 292 aa7.28□□□□□ -1.24
CHD6-204ENST00000440647 EYA2O00167 538 aa7.28□□□□□ -1.24
CHD6-204ENST00000440647 TNFRSF10CO14798 259 aa7.28□□□□□ -1.24
CHD6-204ENST00000440647 UBTFL1P0CB47 393 aaPredicted RBP7.28□□□□□ -1.24
CHD6-204ENST00000440647 CETPP11597 493 aa7.28□□□□□ -1.24
CHD6-204ENST00000440647 IMPDH2P12268 514 aa7.28□□□□□ -1.24
CHD6-204ENST00000440647 POLR2BP30876 1174 aaKnown RBP7.28□□□□□ -1.24
CHD6-204ENST00000440647 PWP2Q15269 919 aaKnown RBP7.28□□□□□ -1.24
CHD6-204ENST00000440647 SLC9C1Q4G0N8 1177 aa7.28□□□□□ -1.24
CHD6-204ENST00000440647 FKBP1CQ5VVH2 108 aa7.28□□□□□ -1.24
CHD6-204ENST00000440647 FAM83AQ86UY5 434 aa7.28□□□□□ -1.24
CHD6-204ENST00000440647 ZSWIM9Q86XI8 627 aa7.28□□□□□ -1.24
CHD6-204ENST00000440647 ERO1BQ86YB8 467 aa7.28□□□□□ -1.24
CHD6-204ENST00000440647 VGLL2Q8N8G2 317 aa7.28□□□□□ -1.24
CHD6-204ENST00000440647 WDR66Q8TBY9 1149 aa7.28□□□□□ -1.24
CHD6-204ENST00000440647 ENOX1Q8TC92 643 aaKnown RBP7.28□□□□□ -1.24
CHD6-204ENST00000440647 BRI3BPQ8WY22 251 aa7.28□□□□□ -1.24
CHD6-204ENST00000440647 SSH1Q8WYL5 1049 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms