RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 PKD2L1Q9P0L9 805 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 SUGT1Q9Y2Z0 365 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 GRIN2DO15399 1336 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 TGFB1I1O43294 461 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 CALUO43852 315 aaPredicted RBP14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 TRIM49P0CI25 452 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 TRIM49CP0CI26 452 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 EPB41P11171 864 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 COPB2P35606 906 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 CYP2J2P51589 502 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 GLE1Q53GS7 698 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 SYDE2Q5VT97 1194 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 ALS2CLQ60I27 953 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 DAAM2Q86T65 1068 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 GLYCTKQ8IVS8 523 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 DCAF4Q8WV16 495 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 NAP1L4Q99733 375 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 TRIM31Q9BZY9 425 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 FAM107BQ9H098 131 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 NYAP2Q9P242 653 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 AMACRQ9UHK6 382 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 DDX3XO00571 662 aaKnown RBP eCLIP14.8□□□□□ -0.043e-18■■■■□ 26.5
HERPUD1-204ENST00000439977 AP3B2Q13367 1082 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 CEP85LQ5SZL2 805 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 RINT1Q6NUQ1 792 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 FOXR2Q6PJQ5 311 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 GBP6Q6ZN66 633 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 EPM2AIP1Q7L775 607 aaPredicted RBP14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 PEX26Q7Z412 305 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 DYDC2Q96IM9 177 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 RNPC3Q96LT9 517 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 SH2D3AQ9BRG2 576 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 TMX4Q9H1E5 349 aaPredicted RBP14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 SIX2Q9NPC8 291 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 VAV3Q9UKW4 847 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 ADAMTSL1Q8N6G6 1762 aa14.8□□□□□ -0.04
HERPUD1-204ENST00000439977 KLRG2A4D1S0 409 aaPredicted RBP14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 PDXKO00764 312 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 EIF3HO15372 352 aaKnown RBP eCLIP14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 SART1O43290 800 aaKnown RBP14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 PRPF4BQ13523 1007 aaKnown RBP14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 TBC1D10BQ4KMP7 808 aaPredicted RBP14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 MKL1Q969V6 931 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 ZDHHC15Q96MV8 337 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 MBOAT7Q96N66 472 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 CELF4Q9BZC1 486 aaKnown RBP14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 RNF14Q9UBS8 474 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 CHORDC1Q9UHD1 332 aaPredicted RBP14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 DDX39AO00148 427 aaKnown RBP14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 FAM13AO94988 1023 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 BMP3P12645 472 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 FLT3P36888 993 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 SREBF1P36956 1147 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 LIG3P49916 1009 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 TNNC1P63316 161 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 ARHGAP44Q17R89 818 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 NEUROG2Q9H2A3 272 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 TYW1Q9NV66 732 aaKnown RBP14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 BCCIPQ9P287 314 aaKnown RBP eCLIP14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 PLAAQ9Y263 795 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 KRIT1O00522 736 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 LRRN2O75325 713 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 FLOT1O75955 427 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 CORO7P57737 925 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 Q4G0T1 1027 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 KIAA1755Q5JYT7 1200 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 PACS2Q86VP3 889 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 ZC3H3Q8IXZ2 948 aaKnown RBP14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 LRRC57Q8N9N7 239 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 TPCN2Q8NHX9 752 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 WDR18Q9BV38 432 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 GLT8D2Q9H1C3 349 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 NR2E1Q9Y466 385 aa14.79□□□□□ -0.04
HERPUD1-204ENST00000439977 NHSQ6T4R5 1651 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 EBAG9O00559 213 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 EVI5O60447 810 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 H2AFZP0C0S5 128 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 SEC24CP53992 1094 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 ARHGAP27Q6ZUM4 889 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 TMEM179Q6ZVK1 233 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 H2AFVQ71UI9 128 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 FAM186BQ8IYM0 893 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 ACER1Q8TDN7 264 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 TSPYL1Q9H0U9 437 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 PLCB1Q9NQ66 1216 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 WRAP73Q9P2S5 460 aaPredicted RBP14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 PRR12Q9ULL5 1215 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 NOC2LQ9Y3T9 749 aaKnown RBP14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 LTBP4Q8N2S1 1624 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 AFF2P51816 1311 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 MYO3BQ8WXR4 1341 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 NDUFAB1O14561 156 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 SLITRK3O94933 977 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 MMP10P09238 476 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 RPL13P26373 211 aaKnown RBP14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 GALCP54803 685 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 CBWD6Q4V339 395 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 CBWD3Q5JTY5 395 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 CBWD5Q5RIA9 395 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms