RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 LBX2Q6XYB7 198 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 DAW1Q8N136 415 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 PROCA1Q8NCQ7 364 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-202ENST00000439724 SMCR8Q8TEV9 937 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-202ENST00000439724 BAP1Q92560 729 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 TSC1Q92574 1164 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 CDHR1Q96JP9 859 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 EIF3CQ99613 913 aaKnown RBP12.96□□□□□ -0.33
SMAD3-202ENST00000439724 STRA6Q9BX79 667 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 POLD4Q9HCU8 107 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 LZTFL1Q9NQ48 299 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 ANKEF1Q9NU02 776 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 CEP72Q9P209 647 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 ARMCX3Q9UH62 379 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-202ENST00000439724 ZNF215Q9UL58 517 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-202ENST00000439724 A0A0U1RQJ8 604 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 EPB41P11171 864 aaKnown RBP12.95□□□□□ -0.34
SMAD3-202ENST00000439724 YWHABP31946 246 aaKnown RBP12.95□□□□□ -0.34
SMAD3-202ENST00000439724 HERVK_113P62684 666 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 KRT83P78385 493 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 PPATQ06203 517 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 KCNA1Q09470 495 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 UGCGQ16739 394 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 TREML2Q5T2D2 321 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 PDXDC1Q6P996 788 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 DLK2Q6UY11 383 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 USP50Q70EL3 339 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-202ENST00000439724 GOLGA5Q8TBA6 731 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 ZC3H15Q8WU90 426 aaKnown RBP12.95□□□□□ -0.34
SMAD3-202ENST00000439724 ATRIPQ8WXE1 791 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 ANKRD7Q92527 254 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 IWS1Q96ST2 819 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 MKNK1Q9BUB5 465 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 MOV10L1Q9BXT6 1211 aaKnown RBP12.95□□□□□ -0.34
SMAD3-202ENST00000439724 NUCKS1Q9H1E3 243 aaKnown RBP12.95□□□□□ -0.34
SMAD3-202ENST00000439724 HAUS4Q9H6D7 363 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 NHEJ1Q9H9Q4 299 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-202ENST00000439724 PCDHB13Q9Y5F0 798 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 ARID2Q68CP9 1835 aa12.95□□□□□ -0.34
SMAD3-202ENST00000439724 A0A0G2JLL6 359 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-202ENST00000439724 AKAP3O75969 853 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 RGS20O76081 388 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 URI1O94763 535 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-202ENST00000439724 NOL4O94818 638 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 AFPP02771 609 aaKnown RBP12.94□□□□□ -0.34
SMAD3-202ENST00000439724 XRCC5P13010 732 aaKnown RBP12.94□□□□□ -0.34
SMAD3-202ENST00000439724 KCNA2P16389 499 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 ERCC3P19447 782 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 NF2P35240 595 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 NCBP1Q09161 790 aaKnown RBP12.94□□□□□ -0.34
SMAD3-202ENST00000439724 KCNH2Q12809 1159 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 PLS1Q14651 629 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 ZC2HC1CQ53FD0 456 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-202ENST00000439724 HS2ST1Q7LGA3 356 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 PRRT2Q7Z6L0 340 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-202ENST00000439724 ERO1BQ86YB8 467 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 RIOX2Q8IUF8 465 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 SMAP1Q8IYB5 467 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-202ENST00000439724 ANKRD13AQ8IZ07 590 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 ZNF710Q8N1W2 664 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 CCDC155Q8N6L0 562 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 DNERQ8NFT8 737 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 SYN2Q92777 582 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-202ENST00000439724 LSM14BQ9BX40 385 aaKnown RBP12.94□□□□□ -0.34
SMAD3-202ENST00000439724 LARSQ9P2J5 1176 aaKnown RBP12.94□□□□□ -0.34
SMAD3-202ENST00000439724 FBXO40Q9UH90 709 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 PFASO15067 1338 aa12.94□□□□□ -0.34
SMAD3-202ENST00000439724 SPDYE5A6NIY4 337 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 LRRC53A6NM62 1247 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 CXCL11O14625 94 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 IRF6O14896 467 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 DKC1O60832 514 aaKnown RBP eCLIP12.93□□□□□ -0.34
SMAD3-202ENST00000439724 IPO7O95373 1038 aaKnown RBP12.93□□□□□ -0.34
SMAD3-202ENST00000439724 PLS3P13797 630 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 MYBPC2Q14324 1141 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 GNPTABQ3T906 1256 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 DPY19L2Q6NUT2 758 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 CACNA2D4Q7Z3S7 1137 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 MTERF4Q7Z6M4 381 aaKnown RBP12.93□□□□□ -0.34
SMAD3-202ENST00000439724 CNKSR2Q8WXI2 1034 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 CDCA5Q96FF9 252 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 BORCS6Q96GS4 357 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 CCDC43Q96MW1 224 aaKnown RBP12.93□□□□□ -0.34
SMAD3-202ENST00000439724 IRX2Q9BZI1 471 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-202ENST00000439724 GBP3Q9H0R5 595 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 GANQ9H2C0 597 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 ST6GALNAC4Q9H4F1 302 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 PLCB1Q9NQ66 1216 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 DMAC2Q9NW81 257 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 PCDHA10Q9Y5I2 948 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 SCN4AP35499 1836 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 SSU72P8A0A1W2PR75 194 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 GTPBP10A4D1E9 387 aaKnown RBP12.93□□□□□ -0.34
SMAD3-202ENST00000439724 SPATA31C2B4DYI2 1134 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 K7ENM7 598 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 BACH1O14867 736 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 CLIC2O15247 247 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 USO1O60763 962 aaKnown RBP12.93□□□□□ -0.34
SMAD3-202ENST00000439724 LCA5LO95447 670 aa12.93□□□□□ -0.34
SMAD3-202ENST00000439724 ICAM3P32942 547 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms