RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.34□□□□□ -1.07
UBR3-205ENST00000439681 NPHP3-ACAD11A0A0J9YXS1 232 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 KPNA6O60684 536 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 F2P00734 622 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 MYL3P08590 195 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 DPYDQ12882 1025 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 PNOCQ13519 176 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 CUL4BQ13620 913 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 BRDTQ58F21 947 aaPredicted RBP8.34□□□□□ -1.07
UBR3-205ENST00000439681 CCDC183Q5T5S1 534 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 RINT1Q6NUQ1 792 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 CNNM4Q6P4Q7 775 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 OTUD6AQ7L8S5 288 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 CKAP2LQ8IYA6 745 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 BBXQ8WY36 941 aaPredicted RBP8.34□□□□□ -1.07
UBR3-205ENST00000439681 RUSC1Q9BVN2 902 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 NUP62CLQ9H1M0 184 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 BLZF1Q9H2G9 400 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 PDLIM7Q9NR12 457 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 KIAA1217Q5T5P2 1943 aa8.34□□□□□ -1.07
UBR3-205ENST00000439681 GTPBP6O43824 516 aaPredicted RBP8.34□□□□□ -1.08
UBR3-205ENST00000439681 HBP1O60381 514 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 SSBP05455 408 aaKnown RBP eCLIP8.34□□□□□ -1.08
UBR3-205ENST00000439681 SARSP49591 514 aaKnown RBP8.34□□□□□ -1.08
UBR3-205ENST00000439681 PSEN2P49810 448 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 POSTNQ15063 836 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 XKR9Q5GH70 373 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 PADI6Q6TGC4 694 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 CXCL17Q6UXB2 119 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 RBM43Q6ZSC3 357 aaKnown RBP8.34□□□□□ -1.08
UBR3-205ENST00000439681 GPBP1Q86WP2 473 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 SPATA20Q8TB22 786 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 DDX12PQ92771 950 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 DNAJC19Q96DA6 116 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 FAM167AQ96KS9 214 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 CEP170P1Q96L14 293 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 DEFB118Q96PH6 123 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 TRIM9Q9C026 710 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 RNF208Q9H0X6 261 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 CYP26B1Q9NR63 512 aa8.34□□□□□ -1.08
UBR3-205ENST00000439681 SEPT9Q9UHD8 586 aaPredicted RBP8.34□□□□□ -1.08
UBR3-205ENST00000439681 ARHGEF35A5YM69 484 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 KLRC4O43908 158 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 ZEB2O60315 1214 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 ASGR1P07306 291 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 INSRRP14616 1297 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 AMPD3Q01432 767 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 GIT2Q14161 759 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 HIC1Q14526 733 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 MFSD10Q14728 455 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 KIAA0753Q2KHM9 967 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 RNF180Q86T96 592 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 PPP1R13LQ8WUF5 828 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 MTG1Q9BT17 334 aaPredicted RBP8.33□□□□□ -1.08
UBR3-205ENST00000439681 POLD4Q9HCU8 107 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 KIAA1468Q9P260 1216 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 ZNF215Q9UL58 517 aaPredicted RBP8.33□□□□□ -1.08
UBR3-205ENST00000439681 OGDHLQ9ULD0 1010 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 PCDHA5Q9Y5H7 936 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 GRIN2DO15399 1336 aa8.33□□□□□ -1.08
UBR3-205ENST00000439681 MYCNP04198 464 aaPredicted RBP8.32□□□□□ -1.08
UBR3-205ENST00000439681 MYL1P05976 194 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 GUCY2CP25092 1073 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 ACLYP53396 1101 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 MTERF2Q49AM1 385 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 ZNF484Q5JVG2 852 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 MARCH8Q5T0T0 291 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 NT5DC1Q5TFE4 455 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 DYMQ7RTS9 669 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 DAW1Q8N136 415 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 PCSK9Q8NBP7 692 aaKnown RBP8.32□□□□□ -1.08
UBR3-205ENST00000439681 ARRDC4Q8NCT1 418 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 TRAPPC12Q8WVT3 735 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 TSEN34Q9BSV6 310 aaKnown RBP8.32□□□□□ -1.08
UBR3-205ENST00000439681 LRRC27Q9C0I9 530 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 MCOLN1Q9GZU1 580 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 CRISPLD2Q9H0B8 497 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 DHX33Q9H6R0 707 aaKnown RBP8.32□□□□□ -1.08
UBR3-205ENST00000439681 XPNPEP1Q9NQW7 623 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 TUBE1Q9UJT0 475 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 TRPC6Q9Y210 931 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 IGKV6-21A0A0C4DH24 114 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 USO1O60763 962 aaKnown RBP8.32□□□□□ -1.08
UBR3-205ENST00000439681 MAFO75444 373 aaPredicted RBP8.32□□□□□ -1.08
UBR3-205ENST00000439681 GJB1P08034 283 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 SMIM10L2AP0DMW4 78 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 SMIM10L2BP0DMW5 78 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 MNX1P50219 401 aaPredicted RBP8.32□□□□□ -1.08
UBR3-205ENST00000439681 RAD51AP2Q09MP3 1159 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 MAPK7Q13164 816 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 MKRN4PQ13434 485 aaPredicted RBP8.32□□□□□ -1.08
UBR3-205ENST00000439681 ZSCAN23Q3MJ62 389 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 SYAP1Q96A49 352 aaPredicted RBP8.32□□□□□ -1.08
UBR3-205ENST00000439681 ZBTB10Q96DT7 871 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 REEP2Q9BRK0 252 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 SETD4Q9NVD3 440 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 KCND2Q9NZV8 630 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 HOOK1Q9UJC3 728 aaKnown RBP8.32□□□□□ -1.08
UBR3-205ENST00000439681 PPME1Q9Y570 386 aa8.32□□□□□ -1.08
UBR3-205ENST00000439681 CENPFP49454 3210 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms