RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 DNM2P50570 870 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 CDC42EP1Q00587 391 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 PRKCEQ02156 737 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 TBC1D8BQ0IIM8 1120 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 ORC2Q13416 577 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-216ENST00000439475 CALCRLQ16602 461 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 EARS2Q5JPH6 523 aaKnown RBP11.76□□□□□ -0.53
MCF2L-216ENST00000439475 FBXO47Q5MNV8 452 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 PPP2R2DQ66LE6 453 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 EFCAB12Q6NXP0 572 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 TSHZ1Q6ZSZ6 1077 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 OTUD6AQ7L8S5 288 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 POTEDQ86YR6 584 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 EXOC8Q8IYI6 725 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 MYOCDQ8IZQ8 938 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 TMX3Q96JJ7 454 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 MAP7D2Q96T17 732 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 CDX2Q99626 313 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-216ENST00000439475 RAD9AQ99638 391 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 NIFKQ9BYG3 293 aaKnown RBP11.76□□□□□ -0.53
MCF2L-216ENST00000439475 BACH2Q9BYV9 841 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 TTYH1Q9H313 450 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-216ENST00000439475 RNF216Q9NWF9 866 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-216ENST00000439475 SEPT9Q9UHD8 586 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-216ENST00000439475 GINS2Q9Y248 185 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 INSL6Q9Y581 213 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 KDM3AQ9Y4C1 1321 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 DDX11L8A8MPP1 907 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 H3BQV1 296 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 GPR182O15218 404 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 ZNF862O60290 1169 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 GJB5O95377 273 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 TRAPPC10P48553 1259 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 TMEM62Q0P6H9 643 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 LPIN1Q14693 890 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 NCAPH2Q6IBW4 605 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.75□□□□□ -0.53
MCF2L-216ENST00000439475 KIAA0319LQ8IZA0 1049 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 HAS1Q92839 578 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 GUCD1Q96NT3 240 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 TTC12Q9H892 705 aaPredicted RBP11.75□□□□□ -0.53
MCF2L-216ENST00000439475 SUGCTQ9HAC7 445 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 SMC3Q9UQE7 1217 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 AKT3Q9Y243 479 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 YBX2Q9Y2T7 364 aaKnown RBP11.75□□□□□ -0.53
MCF2L-216ENST00000439475 PPME1Q9Y570 386 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 WDR81Q562E7 1941 aa11.75□□□□□ -0.53
MCF2L-216ENST00000439475 FAM205CA6NFA0 338 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 RPS6KA5O75582 802 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 C22orf31O95567 290 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 CA3P07451 260 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 FOSL2P15408 326 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 TXKP42681 527 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 CRYBB1P53674 252 aaPredicted RBP11.74□□□□□ -0.53
MCF2L-216ENST00000439475 DEFB103AP81534 67 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 NFX1Q12986 1120 aaKnown RBP11.74□□□□□ -0.53
MCF2L-216ENST00000439475 PAK2Q13177 524 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 GRIN2CQ14957 1233 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 MTERF2Q49AM1 385 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 C4orf19Q8IY42 314 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 BANK1Q8NDB2 785 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 NEK9Q8TD19 979 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 MYLIPQ8WY64 445 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 TOP1MTQ969P6 601 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 ZBTB10Q96DT7 871 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 ZSWIM4Q9H7M6 989 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 VAV3Q9UKW4 847 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 MYO9BQ13459 2157 aa11.74□□□□□ -0.53
MCF2L-216ENST00000439475 DNAH12Q6ZR08 3092 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 ZBTB42B2RXF5 422 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 EML1O00423 815 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 ENPP3O14638 875 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 UPP2O95045 317 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 STAG3L1P0CL83 205 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 MYOGP15173 224 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 CD52P31358 61 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 MCM7P33993 719 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 UGCGQ16739 394 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 TTC38Q5R3I4 469 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 FAM117BQ6P1L5 589 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 MICAL3Q7RTP6 2002 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 NOSTRINQ8IVI9 506 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 ERMNQ8TAM6 284 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 GBF1Q92538 1859 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 CEP170P1Q96L14 293 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 YME1L1Q96TA2 773 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 PADI3Q9ULW8 664 aa11.73□□□□□ -0.53
MCF2L-216ENST00000439475 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-216ENST00000439475 GTPBP6O43824 516 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-216ENST00000439475 VTNP04004 478 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 IGFBP4P22692 258 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 GJB2P29033 226 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 CLCN3P51790 818 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 NLRP11P59045 1033 aaKnown RBP11.72□□□□□ -0.53
MCF2L-216ENST00000439475 TARBP2Q15633 366 aaKnown RBP11.72□□□□□ -0.53
MCF2L-216ENST00000439475 ZNF174Q15697 407 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 TMEM266Q2M3C6 531 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 TCTN1Q2MV58 587 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 MCTP1Q6DN14 999 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 TPH2Q8IWU9 490 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms