RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 CLP1Q92989 425 aaKnown RBP11.25□□□□□ -0.61
CCDC66-207ENST00000439445 ZNF689Q96CS4 500 aaPredicted RBP11.25□□□□□ -0.61
CCDC66-207ENST00000439445 ZBTB10Q96DT7 871 aa11.25□□□□□ -0.61
CCDC66-207ENST00000439445 UPF3BQ9BZI7 483 aaKnown RBP11.25□□□□□ -0.61
CCDC66-207ENST00000439445 AZI2Q9H6S1 392 aa11.25□□□□□ -0.61
CCDC66-207ENST00000439445 AGO3Q9H9G7 860 aaKnown RBP11.25□□□□□ -0.61
CCDC66-207ENST00000439445 SLC12A7Q9Y666 1083 aa11.25□□□□□ -0.61
CCDC66-207ENST00000439445 M0QZ92 97 aa11.24□□□□□ -0.61
CCDC66-207ENST00000439445 RPLP2P05387 115 aaKnown RBP11.24□□□□□ -0.61
CCDC66-207ENST00000439445 GTF2F1P35269 517 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC66-207ENST00000439445 LIFRP42702 1097 aa11.24□□□□□ -0.61
CCDC66-207ENST00000439445 DLX2Q07687 328 aaPredicted RBP11.24□□□□□ -0.61
CCDC66-207ENST00000439445 TMEM62Q0P6H9 643 aa11.24□□□□□ -0.61
CCDC66-207ENST00000439445 HEATR3Q7Z4Q2 680 aa11.24□□□□□ -0.61
CCDC66-207ENST00000439445 LAPTM4BQ86VI4 370 aa11.24□□□□□ -0.61
CCDC66-207ENST00000439445 FANCBQ8NB91 859 aa11.24□□□□□ -0.61
CCDC66-207ENST00000439445 PCYT2Q99447 389 aa11.24□□□□□ -0.61
CCDC66-207ENST00000439445 MXRA8Q9BRK3 442 aa11.24□□□□□ -0.61
CCDC66-207ENST00000439445 PLVAPQ9BX97 442 aa11.24□□□□□ -0.61
CCDC66-207ENST00000439445 FTHL17Q9BXU8 183 aa11.24□□□□□ -0.61
CCDC66-207ENST00000439445 RC3H2Q9HBD1 1191 aaKnown RBP11.24□□□□□ -0.61
CCDC66-207ENST00000439445 JPH1Q9HDC5 661 aaPredicted RBP11.24□□□□□ -0.61
CCDC66-207ENST00000439445 KCNH7Q9NS40 1196 aa11.24□□□□□ -0.61
CCDC66-207ENST00000439445 SLC9A2Q9UBY0 812 aa11.24□□□□□ -0.61
CCDC66-207ENST00000439445 PLAGL2Q9UPG8 496 aa11.24□□□□□ -0.61
CCDC66-207ENST00000439445 SQORQ9Y6N5 450 aa11.24□□□□□ -0.61
CCDC66-207ENST00000439445 LOXHD1Q8IVV2 1947 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 SLC27A2O14975 620 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 LINC01565O15544 149 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 MBTPS2O43462 519 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 MMP1P03956 469 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 STAG3L1P0CL83 205 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 IBSPP21815 317 aaPredicted RBP11.23□□□□□ -0.61
CCDC66-207ENST00000439445 IRS1P35568 1242 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 STAT5BP51692 787 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 PTPN5P54829 565 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 ACTR2P61160 394 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 COL9A3Q14050 684 aaPredicted RBP11.23□□□□□ -0.61
CCDC66-207ENST00000439445 PLCB4Q15147 1175 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 SMAD2Q15796 467 aaKnown RBP11.23□□□□□ -0.61
CCDC66-207ENST00000439445 PAN2Q504Q3 1202 aaKnown RBP11.23□□□□□ -0.61
CCDC66-207ENST00000439445 SYNE3Q6ZMZ3 975 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 NPAS4Q8IUM7 802 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 CYP2W1Q8TAV3 490 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 TRAPPC12Q8WVT3 735 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 LINC01599Q8WXQ3 324 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 PPP2R3CQ969Q6 453 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 POP1Q99575 1024 aaKnown RBP11.23□□□□□ -0.61
CCDC66-207ENST00000439445 SDF4Q9BRK5 362 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 LRRC2Q9BYS8 371 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 PADI3Q9ULW8 664 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 PCDHA2Q9Y5H9 948 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 TRPV2Q9Y5S1 764 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 MRPL42Q9Y6G3 142 aaKnown RBP11.23□□□□□ -0.61
CCDC66-207ENST00000439445 ATG2AQ2TAZ0 1938 aa11.23□□□□□ -0.61
CCDC66-207ENST00000439445 PPFIA3O75145 1194 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 ARP10275 920 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 SCG2P13521 617 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 DNAJB1P25685 340 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 KRT76Q01546 638 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 PAK2Q13177 524 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 ADAM15Q13444 863 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 CAMK1Q14012 370 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 NAALADL2Q58DX5 795 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 TMTC3Q6ZXV5 915 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 PLPPR4Q7Z2D5 763 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 ALYREFQ86V81 257 aaKnown RBP11.22□□□□□ -0.61
CCDC66-207ENST00000439445 MICU3Q86XE3 530 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 CMTR2Q8IYT2 770 aaKnown RBP11.22□□□□□ -0.61
CCDC66-207ENST00000439445 KLHL23Q8NBE8 558 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 SPPL3Q8TCT6 385 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 P2RX5Q93086 422 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 CELF4Q9BZC1 486 aaKnown RBP11.22□□□□□ -0.61
CCDC66-207ENST00000439445 LSG1Q9H089 658 aaKnown RBP11.22□□□□□ -0.61
CCDC66-207ENST00000439445 CD207Q9UJ71 328 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 LRFN2Q9ULH4 789 aa11.22□□□□□ -0.61
CCDC66-207ENST00000439445 NFASCO94856 1347 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 IGSF9BQ9UPX0 1349 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 SMIM35A0A1B0GVV1 85 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 STXBP3O00186 592 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 TBX10O75333 385 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 FOSP01100 380 aaPredicted RBP11.21□□□□□ -0.61
CCDC66-207ENST00000439445 ITGB1P05556 798 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 NDUFV1P49821 464 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 NAPAP54920 295 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 IRX6P78412 446 aaPredicted RBP11.21□□□□□ -0.61
CCDC66-207ENST00000439445 NFX1Q12986 1120 aaKnown RBP11.21□□□□□ -0.61
CCDC66-207ENST00000439445 SMAD4Q13485 552 aaKnown RBP11.21□□□□□ -0.61
CCDC66-207ENST00000439445 NECTIN1Q15223 517 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 TMEM266Q2M3C6 531 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 CREB3L3Q68CJ9 461 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 MTHFD1LQ6UB35 978 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 RBM23Q86U06 439 aaKnown RBP11.21□□□□□ -0.61
CCDC66-207ENST00000439445 RNF135Q8IUD6 432 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 CRIPAKQ8N1N5 446 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 NME8Q8N427 588 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 ANKK1Q8NFD2 765 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 MICAL1Q8TDZ2 1067 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 PGBD1Q96JS3 809 aa11.21□□□□□ -0.61
CCDC66-207ENST00000439445 ESYT1Q9BSJ8 1104 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms