RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 HOXA10P31260 410 aaPredicted RBP16.79■□□□□ 0.28
APP-208ENST00000439274 HPDP32754 393 aaPredicted RBP16.79■□□□□ 0.28
APP-208ENST00000439274 HSD17B3P37058 310 aa16.79■□□□□ 0.28
APP-208ENST00000439274 SEC24CP53992 1094 aa16.79■□□□□ 0.28
APP-208ENST00000439274 SLC35C1Q96A29 364 aa16.79■□□□□ 0.28
APP-208ENST00000439274 COA1Q9GZY4 146 aa16.79■□□□□ 0.28
APP-208ENST00000439274 FAM107BQ9H098 131 aa16.79■□□□□ 0.28
APP-208ENST00000439274 EFCC1Q9HA90 598 aa16.79■□□□□ 0.28
APP-208ENST00000439274 DDX3XO00571 662 aaKnown RBP eCLIP16.79■□□□□ 0.288e-27■■■■□ 24.4
APP-208ENST00000439274 SART1O43290 800 aaKnown RBP16.79■□□□□ 0.28
APP-208ENST00000439274 CALUO43852 315 aaPredicted RBP16.79■□□□□ 0.28
APP-208ENST00000439274 ERLIN2O94905 339 aa16.79■□□□□ 0.28
APP-208ENST00000439274 CPP00450 1065 aa16.79■□□□□ 0.28
APP-208ENST00000439274 UAP1Q16222 522 aaPredicted RBP16.79■□□□□ 0.28
APP-208ENST00000439274 C10orf76Q5T2E6 689 aa16.79■□□□□ 0.28
APP-208ENST00000439274 POTEAQ6S8J7 498 aa16.79■□□□□ 0.28
APP-208ENST00000439274 PBKQ96KB5 322 aa16.79■□□□□ 0.28
APP-208ENST00000439274 RGL1Q9NZL6 768 aa16.79■□□□□ 0.28
APP-208ENST00000439274 PDXKO00764 312 aa16.78■□□□□ 0.28
APP-208ENST00000439274 FLOT1O75955 427 aa16.78■□□□□ 0.28
APP-208ENST00000439274 GFPT2O94808 682 aa16.78■□□□□ 0.28
APP-208ENST00000439274 HOXA13P31271 388 aaPredicted RBP16.78■□□□□ 0.28
APP-208ENST00000439274 FLT3P36888 993 aa16.78■□□□□ 0.28
APP-208ENST00000439274 PEX26Q7Z412 305 aa16.78■□□□□ 0.28
APP-208ENST00000439274 ERMNQ8TAM6 284 aa16.78■□□□□ 0.28
APP-208ENST00000439274 ACTRT1Q8TDG2 376 aa16.78■□□□□ 0.28
APP-208ENST00000439274 U2AF1L4Q8WU68 220 aaKnown RBP16.78■□□□□ 0.28
APP-208ENST00000439274 BZW2Q9Y6E2 419 aaKnown RBP16.78■□□□□ 0.28
APP-208ENST00000439274 PGRMC1O00264 195 aaKnown RBP16.78■□□□□ 0.28
APP-208ENST00000439274 KRIT1O00522 736 aa16.78■□□□□ 0.28
APP-208ENST00000439274 CES2O00748 559 aa16.78■□□□□ 0.28
APP-208ENST00000439274 MSH4O15457 936 aa16.78■□□□□ 0.28
APP-208ENST00000439274 PRKCIP41743 596 aa16.78■□□□□ 0.28
APP-208ENST00000439274 JAM2P57087 298 aa16.78■□□□□ 0.28
APP-208ENST00000439274 SIAH1Q8IUQ4 282 aa16.78■□□□□ 0.28
APP-208ENST00000439274 CRAMP1Q96RY5 1269 aa16.78■□□□□ 0.28
APP-208ENST00000439274 ZC3H12CQ9C0D7 883 aaKnown RBP16.78■□□□□ 0.28
APP-208ENST00000439274 GLT8D2Q9H1C3 349 aa16.78■□□□□ 0.28
APP-208ENST00000439274 KCNQ5Q9NR82 932 aa16.78■□□□□ 0.28
APP-208ENST00000439274 TYW1Q9NV66 732 aaKnown RBP16.78■□□□□ 0.28
APP-208ENST00000439274 AMACRQ9UHK6 382 aa16.78■□□□□ 0.28
APP-208ENST00000439274 NENFQ9UMX5 172 aa16.78■□□□□ 0.28
APP-208ENST00000439274 GREB1LQ9C091 1923 aaPredicted RBP16.78■□□□□ 0.28
APP-208ENST00000439274 DDTLA6NHG4 134 aaPredicted RBP16.77■□□□□ 0.28
APP-208ENST00000439274 EML1O00423 815 aa16.77■□□□□ 0.28
APP-208ENST00000439274 PLSCR1O15162 318 aa16.77■□□□□ 0.28
APP-208ENST00000439274 APBA3O96018 575 aa16.77■□□□□ 0.28
APP-208ENST00000439274 ITGB3BPQ13352 177 aaPredicted RBP16.77■□□□□ 0.28
APP-208ENST00000439274 AP3B2Q13367 1082 aa16.77■□□□□ 0.28
APP-208ENST00000439274 DAAM2Q86T65 1068 aa16.77■□□□□ 0.28
APP-208ENST00000439274 KSR1Q8IVT5 923 aa16.77■□□□□ 0.28
APP-208ENST00000439274 PIGOQ8TEQ8 1089 aa16.77■□□□□ 0.28
APP-208ENST00000439274 AKT1S1Q96B36 256 aa16.77■□□□□ 0.28
APP-208ENST00000439274 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.77■□□□□ 0.28
APP-208ENST00000439274 EPN3Q9H201 632 aa16.77■□□□□ 0.28
APP-208ENST00000439274 TMBIM4Q9HC24 238 aa16.77■□□□□ 0.28
APP-208ENST00000439274 C10orf71Q711Q0 1435 aa16.77■□□□□ 0.28
APP-208ENST00000439274 PPP1R37O75864 691 aa16.77■□□□□ 0.28
APP-208ENST00000439274 H2AFZP0C0S5 128 aa16.77■□□□□ 0.28
APP-208ENST00000439274 INPP5BP32019 993 aa16.77■□□□□ 0.28
APP-208ENST00000439274 IKQ13123 557 aaPredicted RBP16.77■□□□□ 0.28
APP-208ENST00000439274 PTGISQ16647 500 aa16.77■□□□□ 0.28
APP-208ENST00000439274 IFI16Q16666 785 aaKnown RBP16.77■□□□□ 0.28
APP-208ENST00000439274 Q4G0T1 1027 aa16.77■□□□□ 0.28
APP-208ENST00000439274 NAA35Q5VZE5 725 aa16.77■□□□□ 0.28
APP-208ENST00000439274 FBXW10Q5XX13 1052 aa16.77■□□□□ 0.28
APP-208ENST00000439274 H2AFVQ71UI9 128 aa16.77■□□□□ 0.28
APP-208ENST00000439274 TEKT1Q969V4 418 aa16.77■□□□□ 0.28
APP-208ENST00000439274 CELF4Q9BZC1 486 aaKnown RBP16.77■□□□□ 0.28
APP-208ENST00000439274 OSGEPQ9NPF4 335 aa16.77■□□□□ 0.28
APP-208ENST00000439274 VAV3Q9UKW4 847 aa16.77■□□□□ 0.28
APP-208ENST00000439274 LTBP1Q14766 1721 aa16.77■□□□□ 0.27
APP-208ENST00000439274 RGPD3A6NKT7 1758 aaPredicted RBP16.77■□□□□ 0.27
APP-208ENST00000439274 RGPD4Q7Z3J3 1758 aa16.77■□□□□ 0.27
APP-208ENST00000439274 SPDYE3A6NKU9 549 aa16.76■□□□□ 0.27
APP-208ENST00000439274 DAPK3O43293 454 aa16.76■□□□□ 0.27
APP-208ENST00000439274 TGFB1I1O43294 461 aa16.76■□□□□ 0.27
APP-208ENST00000439274 TBCAO75347 108 aaKnown RBP16.76■□□□□ 0.27
APP-208ENST00000439274 GDF11O95390 407 aa16.76■□□□□ 0.27
APP-208ENST00000439274 MDH1P40925 334 aaKnown RBP16.76■□□□□ 0.27
APP-208ENST00000439274 CERKLQ49MI3 558 aaPredicted RBP16.76■□□□□ 0.27
APP-208ENST00000439274 ZC2HC1CQ53FD0 456 aaPredicted RBP16.76■□□□□ 0.27
APP-208ENST00000439274 MOXD1Q6UVY6 613 aa16.76■□□□□ 0.27
APP-208ENST00000439274 SP8Q8IXZ3 490 aa16.76■□□□□ 0.27
APP-208ENST00000439274 LNX1Q8TBB1 728 aaPredicted RBP16.76■□□□□ 0.27
APP-208ENST00000439274 DCAF4Q8WV16 495 aa16.76■□□□□ 0.27
APP-208ENST00000439274 STXBP5LQ9Y2K9 1186 aa16.76■□□□□ 0.27
APP-208ENST00000439274 SUGT1Q9Y2Z0 365 aa16.76■□□□□ 0.27
APP-208ENST00000439274 HMGB1P1B2RPK0 211 aaPredicted RBP16.76■□□□□ 0.27
APP-208ENST00000439274 H0YGN5 161 aa16.76■□□□□ 0.27
APP-208ENST00000439274 ZBTB39O15060 712 aa16.76■□□□□ 0.27
APP-208ENST00000439274 SLC26A4O43511 780 aa16.76■□□□□ 0.27
APP-208ENST00000439274 NMT1P30419 496 aaKnown RBP16.76■□□□□ 0.27
APP-208ENST00000439274 SF3B2Q13435 895 aaKnown RBP16.76■□□□□ 0.27
APP-208ENST00000439274 CTTNQ14247 550 aaKnown RBP16.76■□□□□ 0.27
APP-208ENST00000439274 COG2Q14746 738 aa16.76■□□□□ 0.27
APP-208ENST00000439274 ZNF473Q8WTR7 871 aaKnown RBP16.76■□□□□ 0.27
APP-208ENST00000439274 CCDC17Q96LX7 622 aa16.76■□□□□ 0.27
APP-208ENST00000439274 EIF2AK1Q9BQI3 630 aaKnown RBP16.76■□□□□ 0.27
APP-208ENST00000439274 AMNQ9BXJ7 453 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms