RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 GRIK1P39086 918 aa13.07□□□□□ -0.32
NEK1-201ENST00000439128 CACNB2Q08289 660 aaPredicted RBP13.07□□□□□ -0.32
NEK1-201ENST00000439128 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.07□□□□□ -0.32
NEK1-201ENST00000439128 ALKBH8Q96BT7 664 aaKnown RBP13.07□□□□□ -0.32
NEK1-201ENST00000439128 SMYD2Q9NRG4 433 aa13.07□□□□□ -0.32
NEK1-201ENST00000439128 ZNF75DP51815 510 aa13.07□□□□□ -0.32
NEK1-201ENST00000439128 FKBP3Q00688 224 aaKnown RBP13.07□□□□□ -0.32
NEK1-201ENST00000439128 NEK9Q8TD19 979 aa13.07□□□□□ -0.32
NEK1-201ENST00000439128 SLC7A5P2Q9GIP4 190 aa13.07□□□□□ -0.32
NEK1-201ENST00000439128 SUDS3Q9H7L9 328 aaPredicted RBP13.07□□□□□ -0.32
NEK1-201ENST00000439128 BZW2Q9Y6E2 419 aaKnown RBP13.07□□□□□ -0.32
NEK1-201ENST00000439128 GSG1L2A8MUP6 293 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 F8W8V4 182 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 MAP3K7O43318 606 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 INTS5Q6P9B9 1019 aaKnown RBP13.06□□□□□ -0.32
NEK1-201ENST00000439128 ERICH1Q86X53 443 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 ATP6V1E2Q96A05 226 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 ERO1AQ96HE7 468 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 SPATA2LQ8IUW3 424 aaPredicted RBP13.06□□□□□ -0.32
NEK1-201ENST00000439128 CHST13Q8NET6 341 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 ATG4CQ96DT6 458 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 ACAP3Q96P50 834 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 FAM217BQ9NTX9 383 aaPredicted RBP13.06□□□□□ -0.32
NEK1-201ENST00000439128 KRIT1O00522 736 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 MOCS2O96007 188 aaPredicted RBP13.06□□□□□ -0.32
NEK1-201ENST00000439128 ARHGEF18Q6ZSZ5 1173 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 MCUQ8NE86 351 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 EPSTI1Q96J88 318 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 XPO4Q9C0E2 1151 aaKnown RBP13.06□□□□□ -0.32
NEK1-201ENST00000439128 OSBPL3Q9H4L5 887 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 E9PMD0 336 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 CALRP27797 417 aaKnown RBP13.06□□□□□ -0.32
NEK1-201ENST00000439128 GTF2F1P35269 517 aaKnown RBP eCLIP13.06□□□□□ -0.32
NEK1-201ENST00000439128 THPOP40225 353 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 CDC42EP1Q00587 391 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 PPARDQ03181 441 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 GSDMAQ96QA5 445 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 KIAA1586Q9HCI6 787 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 MANSC4A6NHS7 340 aaPredicted RBP13.06□□□□□ -0.32
NEK1-201ENST00000439128 RALAP11233 206 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 CYP2C9P11712 490 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 COPB1P53618 953 aaKnown RBP13.06□□□□□ -0.32
NEK1-201ENST00000439128 ZNF658Q5TYW1 1059 aaPredicted RBP13.06□□□□□ -0.32
NEK1-201ENST00000439128 PPP1R2P3Q6NXS1 205 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 RUFY4Q6ZNE9 571 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 RAPH1Q70E73 1250 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 SEPT1Q8WYJ6 367 aa13.06□□□□□ -0.32
NEK1-201ENST00000439128 A8MXQ7 604 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 MYBP10242 640 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 OR1G1P47890 313 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 THOC5Q13769 683 aaKnown RBP13.05□□□□□ -0.32
NEK1-201ENST00000439128 P3H4Q92791 437 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 RAB17Q9H0T7 212 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 C17orf102A2RUQ5 167 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 CYBBP04839 570 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 GARSP41250 739 aaKnown RBP13.05□□□□□ -0.32
NEK1-201ENST00000439128 CXCL9Q07325 125 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 GLB1LQ6UWU2 654 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 SFR1Q86XK3 245 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 POTEDQ86YR6 584 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 ARFGAP2Q8N6H7 521 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 HSPH1Q92598 858 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 HDAC11Q96DB2 347 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 MRPL47Q9HD33 250 aaKnown RBP13.05□□□□□ -0.32
NEK1-201ENST00000439128 NGRNQ9NPE2 291 aaKnown RBP13.05□□□□□ -0.32
NEK1-201ENST00000439128 STARD7Q9NQZ5 370 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 FANCLQ9NW38 375 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 MTMR4Q9NYA4 1195 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 SOX5P35711 763 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 GCLCP48506 637 aaPredicted RBP13.05□□□□□ -0.32
NEK1-201ENST00000439128 DARS2Q6PI48 645 aaKnown RBP13.05□□□□□ -0.32
NEK1-201ENST00000439128 ZNF467Q7Z7K2 595 aaPredicted RBP13.05□□□□□ -0.32
NEK1-201ENST00000439128 CDKL2Q92772 493 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 MCF2LO15068 1137 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 MOCS3O95396 460 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 ITGA4P13612 1032 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 YWHAGP61981 247 aaKnown RBP eCLIP13.05□□□□□ -0.32
NEK1-201ENST00000439128 ZNF560Q96MR9 790 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 ENTPD7Q9NQZ7 604 aa13.05□□□□□ -0.32
NEK1-201ENST00000439128 POTECB2RU33 542 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 C2CD2LO14523 706 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 PRKCBP05771 671 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 NR3C2P08235 984 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 ATF2P15336 505 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 IQCB1Q15051 598 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 INTS8Q75QN2 995 aaKnown RBP13.04□□□□□ -0.32
NEK1-201ENST00000439128 SCFD2Q8WU76 684 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 CCDC51Q96ER9 411 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 PRMT6Q96LA8 375 aaPredicted RBP13.04□□□□□ -0.32
NEK1-201ENST00000439128 POLR3EQ9NVU0 708 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.04□□□□□ -0.32
NEK1-201ENST00000439128 IMPACTQ9P2X3 320 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 NBPF9Q3BBW0 867 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 NXNQ6DKJ4 435 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 POLLQ9UGP5 575 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 AGLP35573 1532 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 RGS12O14924 1447 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 ARHGAP6O43182 974 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 BTBD8Q5XKL5 378 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 SDCCAG8Q86SQ7 713 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms