RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 TBC1D17Q9HA65 648 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 KCNK12Q9HB15 430 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 DUSP12Q9UNI6 340 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 PKD1L2Q7Z442 2459 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 DENND3A2RUS2 1198 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 GCOM1H8Y6P7 765 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-208ENST00000439029 PARP1P09874 1014 aaKnown RBP11.26□□□□□ -0.61
SMPD4-208ENST00000439029 POLR2MP0CAP2 368 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 INSRRP14616 1297 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 PLCB3Q01970 1234 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 GHRHRQ02643 423 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 ASPRV1Q53RT3 343 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 XRRA1Q6P2D8 792 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 KCNT2Q6UVM3 1135 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 MFSD6Q6ZSS7 791 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 HOMER1Q86YM7 354 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 MRPL43Q8N983 215 aaKnown RBP11.26□□□□□ -0.61
SMPD4-208ENST00000439029 ST13P5Q8NFI4 369 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-208ENST00000439029 PPP1R16BQ96T49 567 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 CELF4Q9BZC1 486 aaKnown RBP11.26□□□□□ -0.61
SMPD4-208ENST00000439029 CDHR5Q9HBB8 845 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 CDV3Q9UKY7 258 aaKnown RBP11.26□□□□□ -0.61
SMPD4-208ENST00000439029 LZTS1Q9Y250 596 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 NOC2LQ9Y3T9 749 aaKnown RBP11.26□□□□□ -0.61
SMPD4-208ENST00000439029 NEDD4P46934 1319 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 IGSF9BQ9UPX0 1349 aa11.26□□□□□ -0.61
SMPD4-208ENST00000439029 BAZ2BQ9UIF8 2168 aaKnown RBP11.26□□□□□ -0.61
SMPD4-208ENST00000439029 FAM208BQ5VWN6 2430 aa11.25□□□□□ -0.61
SMPD4-208ENST00000439029 FANCMQ8IYD8 2048 aa11.25□□□□□ -0.61
SMPD4-208ENST00000439029 FASNP49327 2511 aaKnown RBP11.25□□□□□ -0.61
SMPD4-208ENST00000439029 GSTTP1A0A1W2PQM5 241 aa11.25□□□□□ -0.61
SMPD4-208ENST00000439029 FIBPO43427 364 aa11.25□□□□□ -0.61
SMPD4-208ENST00000439029 LRRN2O75325 713 aa11.25□□□□□ -0.61
SMPD4-208ENST00000439029 CXCL14O95715 111 aa11.25□□□□□ -0.61
SMPD4-208ENST00000439029 ADRB1P08588 477 aa11.25□□□□□ -0.61
SMPD4-208ENST00000439029 KCNA4P22459 653 aa11.25□□□□□ -0.61
SMPD4-208ENST00000439029 KRT17Q04695 432 aa11.25□□□□□ -0.61
SMPD4-208ENST00000439029 SMC1AQ14683 1233 aaKnown RBP11.25□□□□□ -0.61
SMPD4-208ENST00000439029 ALX1Q15699 326 aa11.25□□□□□ -0.61
SMPD4-208ENST00000439029 VARS2Q5ST30 1063 aaKnown RBP11.25□□□□□ -0.61
SMPD4-208ENST00000439029 PI4K2BQ8TCG2 481 aa11.25□□□□□ -0.61
SMPD4-208ENST00000439029 ACSF2Q96CM8 615 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-208ENST00000439029 ZNF558Q96NG5 402 aa11.25□□□□□ -0.61
SMPD4-208ENST00000439029 INPP4AQ96PE3 977 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-208ENST00000439029 ATP6V0A4Q9HBG4 840 aa11.25□□□□□ -0.61
SMPD4-208ENST00000439029 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-208ENST00000439029 DDX19BQ9UMR2 479 aa11.25□□□□□ -0.61
SMPD4-208ENST00000439029 USTQ9Y2C2 406 aa11.25□□□□□ -0.61
SMPD4-208ENST00000439029 SPDYE4A6NLX3 237 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 C9IYK1 514 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 NT5C1B-RDH14C9J2C7 533 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 KINO60870 393 aaKnown RBP11.24□□□□□ -0.61
SMPD4-208ENST00000439029 ATP9AO75110 1047 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 KRT76Q01546 638 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 TBC1D8BQ0IIM8 1120 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 OTOP3Q7RTS5 596 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 DGKHQ86XP1 1220 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 C1orf210Q8IVY1 113 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 TMEM87AQ8NBN3 555 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 TMEM40Q8WWA1 233 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 FAM227BQ96M60 508 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 RGS18Q9NS28 235 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 ERAP1Q9NZ08 941 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 SPG21Q9NZD8 308 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 USP18Q9UMW8 372 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 ST3GAL5Q9UNP4 418 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 SQORQ9Y6N5 450 aa11.24□□□□□ -0.61
SMPD4-208ENST00000439029 FRYLO94915 3013 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-208ENST00000439029 ZBTB5O15062 677 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 RPS6KA5O75582 802 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 GLULP15104 373 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 METAP2P50579 478 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMPD4-208ENST00000439029 PLCB4Q15147 1175 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 SLC35G1Q2M3R5 365 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 CCDC149Q6ZUS6 474 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 SLC24A5Q71RS6 500 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 CABP7Q86V35 215 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 MAML2Q8IZL2 1156 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-208ENST00000439029 RNF169Q8NCN4 708 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 PIBF1Q8WXW3 757 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 SEPT1Q8WYJ6 367 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 ESR2Q92731 530 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 CASD1Q96PB1 797 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 PIGSQ96S52 555 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 FOXQ1Q9C009 403 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 RNF19AQ9NV58 838 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 MAP3K20Q9NYL2 800 aaKnown RBP11.23□□□□□ -0.61
SMPD4-208ENST00000439029 WNT16Q9UBV4 365 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 SIT1Q9Y3P8 196 aa11.23□□□□□ -0.61
SMPD4-208ENST00000439029 A0A0D9SFI3 127 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 RRN3P2A6NIE6 340 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 KLRF2D3W0D1 207 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 MYBP10242 640 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 SDHBP21912 280 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 GBP2P32456 591 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-208ENST00000439029 PPM1JQ5JR12 505 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 ZNF589Q86UQ0 364 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-208ENST00000439029 SLC39A11Q8N1S5 342 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 ENAHQ8N8S7 591 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms