RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 DGKHQ86XP1 1220 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 THNSL1Q8IYQ7 743 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 DNAJB3Q8WWF6 145 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 RUBCNQ92622 972 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 GPKOWQ92917 476 aaPredicted RBP eCLIP12.91□□□□□ -0.34
CSTF3-203ENST00000438862 SMOC2Q9H3U7 446 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 BCAS3Q9H6U6 928 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 LIMD1Q9UGP4 676 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 USTQ9Y2C2 406 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 PCDHB7Q9Y5E2 793 aa12.91□□□□□ -0.34
CSTF3-203ENST00000438862 CACNA1GO43497 2377 aa12.9□□□□□ -0.34
CSTF3-203ENST00000438862 OPLAHO14841 1288 aa12.9□□□□□ -0.34
CSTF3-203ENST00000438862 DHX16O60231 1041 aaKnown RBP12.9□□□□□ -0.34
CSTF3-203ENST00000438862 ASGR2P07307 311 aa12.9□□□□□ -0.34
CSTF3-203ENST00000438862 NPR3P17342 541 aa12.9□□□□□ -0.34
CSTF3-203ENST00000438862 MRPS6P82932 125 aaKnown RBP12.9□□□□□ -0.34
CSTF3-203ENST00000438862 CCDC178Q5BJE1 867 aa12.9□□□□□ -0.34
CSTF3-203ENST00000438862 UTP14CQ5TAP6 766 aaKnown RBP12.9□□□□□ -0.34
CSTF3-203ENST00000438862 TSHZ3Q63HK5 1081 aa12.9□□□□□ -0.34
CSTF3-203ENST00000438862 ZC3H14Q6PJT7 736 aaKnown RBP12.9□□□□□ -0.34
CSTF3-203ENST00000438862 TDRD5Q8NAT2 981 aaKnown RBP12.9□□□□□ -0.34
CSTF3-203ENST00000438862 CYP2W1Q8TAV3 490 aa12.9□□□□□ -0.34
CSTF3-203ENST00000438862 MRPS27Q92552 414 aaKnown RBP12.9□□□□□ -0.34
CSTF3-203ENST00000438862 HINFPQ9BQA5 517 aa12.9□□□□□ -0.34
CSTF3-203ENST00000438862 JMJD4Q9H9V9 463 aa12.9□□□□□ -0.34
CSTF3-203ENST00000438862 VAT1LQ9HCJ6 419 aa12.9□□□□□ -0.34
CSTF3-203ENST00000438862 TUBE1Q9UJT0 475 aa12.9□□□□□ -0.34
CSTF3-203ENST00000438862 PADI3Q9ULW8 664 aa12.9□□□□□ -0.34
CSTF3-203ENST00000438862 TTC41PQ6P2S7 1318 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 MBLAC1A4D2B0 266 aaPredicted RBP12.89□□□□□ -0.35
CSTF3-203ENST00000438862 SPATA31C2B4DYI2 1134 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 FGAP02671 866 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 SARSP49591 514 aaKnown RBP12.89□□□□□ -0.35
CSTF3-203ENST00000438862 GATMP50440 423 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 PLCB3Q01970 1234 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 PPFIA1Q13136 1202 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 CAMK2BQ13554 666 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 PLPP4Q5VZY2 271 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 MFSD6Q6ZSS7 791 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 TRIM50Q86XT4 487 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 COLGALT1Q8NBJ5 622 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 PNMA1Q8ND90 353 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 ANKK1Q8NFD2 765 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 IL31RAQ8NI17 732 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 TCF25Q9BQ70 676 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 ENTPD7Q9NQZ7 604 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 PCDHA1Q9Y5I3 950 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 ACACBO00763 2458 aa12.89□□□□□ -0.35
CSTF3-203ENST00000438862 FNDC1Q4ZHG4 1894 aaPredicted RBP12.89□□□□□ -0.35
CSTF3-203ENST00000438862 M0QZ92 97 aa12.88□□□□□ -0.35
CSTF3-203ENST00000438862 FIBPO43427 364 aa12.88□□□□□ -0.35
CSTF3-203ENST00000438862 NT5C2P49902 561 aa12.88□□□□□ -0.35
CSTF3-203ENST00000438862 TRAF1Q13077 416 aa12.88□□□□□ -0.35
CSTF3-203ENST00000438862 PAK2Q13177 524 aa12.88□□□□□ -0.35
CSTF3-203ENST00000438862 GRIK4Q16099 956 aa12.88□□□□□ -0.35
CSTF3-203ENST00000438862 ST3GAL2Q16842 350 aa12.88□□□□□ -0.35
CSTF3-203ENST00000438862 RSPO4Q2I0M5 234 aaPredicted RBP12.88□□□□□ -0.35
CSTF3-203ENST00000438862 ATAT1Q5SQI0 421 aa12.88□□□□□ -0.35
CSTF3-203ENST00000438862 VPS53Q5VIR6 699 aa12.88□□□□□ -0.35
CSTF3-203ENST00000438862 GIMAP8Q8ND71 665 aaPredicted RBP12.88□□□□□ -0.35
CSTF3-203ENST00000438862 INPP4AQ96PE3 977 aaPredicted RBP12.88□□□□□ -0.35
CSTF3-203ENST00000438862 SENP7Q9BQF6 1050 aa12.88□□□□□ -0.35
CSTF3-203ENST00000438862 CYP26B1Q9NR63 512 aa12.88□□□□□ -0.35
CSTF3-203ENST00000438862 ZFHX4Q86UP3 3567 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 CEP250Q9BV73 2442 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 RRN3P2A6NIE6 340 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 TBKBP1A7MCY6 615 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 HIDE1A8MVS5 230 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 GCOM1H8Y6P7 765 aaPredicted RBP12.87□□□□□ -0.35
CSTF3-203ENST00000438862 PARP1P09874 1014 aaKnown RBP12.87□□□□□ -0.35
CSTF3-203ENST00000438862 POLR2MP0CAP2 368 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 LAG3P18627 525 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 HOXA13P31271 388 aaPredicted RBP12.87□□□□□ -0.35
CSTF3-203ENST00000438862 KRT17Q04695 432 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 APOBRQ0VD83 1088 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 TDGQ13569 410 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 MARCH8Q5T0T0 291 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 KIAA0319Q5VV43 1072 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 ESR2Q92731 530 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 BORCS6Q96GS4 357 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 IRX2Q9BZI1 471 aaPredicted RBP12.87□□□□□ -0.35
CSTF3-203ENST00000438862 KAT14Q9H8E8 782 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 TYW1Q9NV66 732 aaKnown RBP12.87□□□□□ -0.35
CSTF3-203ENST00000438862 ERAP1Q9NZ08 941 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 KIAA1468Q9P260 1216 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 CDH22Q9UJ99 828 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 DBR1Q9UK59 544 aaKnown RBP12.87□□□□□ -0.35
CSTF3-203ENST00000438862 FBXL21Q9UKT6 434 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 TRPV2Q9Y5S1 764 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 HCFC2Q9Y5Z7 792 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 R4GN57 208 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 FRYLO94915 3013 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 DOCK5Q9H7D0 1870 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 IGSF9BQ9UPX0 1349 aa12.87□□□□□ -0.35
CSTF3-203ENST00000438862 LOXHD1Q8IVV2 1947 aa12.86□□□□□ -0.35
CSTF3-203ENST00000438862 EOMESO95936 686 aa12.86□□□□□ -0.35
CSTF3-203ENST00000438862 TCF7P36402 384 aaPredicted RBP12.86□□□□□ -0.35
CSTF3-203ENST00000438862 MRPS9P82933 396 aaKnown RBP12.86□□□□□ -0.35
CSTF3-203ENST00000438862 KIAA1841Q6NSI8 718 aa12.86□□□□□ -0.35
CSTF3-203ENST00000438862 TMC7Q7Z402 723 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms