RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 NOX5Q96PH1 765 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 MENTQ9BUN1 341 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 WNT8AQ9H1J5 351 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 NTMQ9P121 344 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 ZFP69BQ9UJL9 534 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 FBXO10Q9UK96 956 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 CROTQ9UKG9 612 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 NPIPB6E9PJ23 425 aa5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 PPM1GO15355 546 aaPredicted RBP5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 MAFO75444 373 aaPredicted RBP5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 HMGB1P09429 215 aaKnown RBP5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 RPL13P26373 211 aaKnown RBP5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 APEX1P27695 318 aaKnown RBP5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 IL13P35225 146 aa5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 CDKN1CP49918 316 aaPredicted RBP5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 SLC6A3Q01959 620 aa5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 MAP3K12Q12852 859 aa5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 NFATC3Q12968 1075 aa5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 SMAD4Q13485 552 aaKnown RBP5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 STILQ15468 1287 aa5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 SLFN12LQ6IEE8 588 aa5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 ESRP1Q6NXG1 681 aaKnown RBP5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 STK32CQ86UX6 486 aa5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 RTF1Q92541 710 aaKnown RBP5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 DACT3Q96B18 629 aaPredicted RBP5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 AHCYL2Q96HN2 611 aaKnown RBP5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 CEP89Q96ST8 783 aa5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 AMNQ9BXJ7 453 aa5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 FAM126AQ9BYI3 521 aaPredicted RBP5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 OR10A5Q9H207 317 aa5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 EPB41L4AQ9HCS5 686 aaPredicted RBP5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 RBPJLQ9UBG7 517 aa5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 MSRAQ9UJ68 235 aa5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 WASF3Q9UPY6 502 aa5.17□□□□□ -1.58
LSM1P1-201ENST00000438629 SH3D21A4FU49 640 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 H0Y858 1186 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 K7ESF4 209 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 PRPF6O94906 941 aaKnown RBP5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 MPIG6BO95866 241 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 PRLP01236 227 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 PLA2G1BP04054 148 aaKnown RBP5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 MC4RP32245 332 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 SARSP49591 514 aaKnown RBP5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 AFF3P51826 1226 aaKnown RBP5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 ADCY2Q08462 1091 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 WDR72Q3MJ13 1102 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 TCERG1LQ5VWI1 586 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 LHFPL2Q6ZUX7 228 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 FERMT3Q86UX7 667 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 STPG3Q8N7X2 389 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 CLRN3Q8NCR9 226 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 RSAD2Q8WXG1 361 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 TOX2Q96NM4 488 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 ACAP3Q96P50 834 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 TACO1Q9BSH4 297 aaKnown RBP5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 L2HGDHQ9H9P8 463 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 KCND1Q9NSA2 647 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 SPATA6Q9NWH7 488 aaPredicted RBP5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 DDX56Q9NY93 547 aaKnown RBP5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 SYNPO2Q9UMS6 1093 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 SPEF1Q9Y4P9 236 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 WASHC2AQ641Q2 1341 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 WASHC2CQ9Y4E1 1318 aa5.16□□□□□ -1.58
LSM1P1-201ENST00000438629 ST20-MTHFSA0A0A6YYL1 179 aa5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 NUAK1O60285 661 aa5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 KDM1AO60341 852 aa5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 IL18BPO95998 194 aa5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 EXOSC10Q01780 885 aaKnown RBP5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 ITKQ08881 620 aa5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 PRR31Q5SQ13 230 aa5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 PRAMEF9Q5VWM5 478 aa5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 KIAA1841Q6NSI8 718 aa5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 TRMT10BQ6PF06 316 aaKnown RBP5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 KANSL1Q7Z3B3 1105 aa5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 RPUSD2Q8IZ73 545 aaKnown RBP5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 LINC01356Q8N9X3 169 aa5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 FERMT2Q96AC1 680 aa5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 ZNF496Q96IT1 587 aaPredicted RBP5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 SYT3Q9BQG1 590 aa5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 FTSJ1Q9UET6 329 aa5.15□□□□□ -1.59
LSM1P1-201ENST00000438629 GOLGA8AA7E2F4 631 aa5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 GOLGA8BA8MQT2 603 aa5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 CUTAO60888 179 aa5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 PRKD3O94806 890 aa5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 APOL3O95236 402 aa5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 KNG1P01042 644 aa5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 C8AP07357 584 aa5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 EVA1CP58658 441 aa5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 FAM50AQ14320 339 aaKnown RBP5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 SYDE2Q5VT97 1194 aa5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 CNTD1Q8N815 330 aa5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 ZSCAN18Q8TBC5 510 aaPredicted RBP5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 ZSWIM3Q96MP5 696 aa5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 MYL10Q9BUA6 226 aa5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 TMEM168Q9H0V1 697 aa5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 KCMF1Q9P0J7 381 aa5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 NUMBLQ9Y6R0 609 aa5.14□□□□□ -1.59
LSM1P1-201ENST00000438629 C9orf118A6NHY6 69 aa5.13□□□□□ -1.59
LSM1P1-201ENST00000438629 DBX1A6NMT0 343 aa5.13□□□□□ -1.59
LSM1P1-201ENST00000438629 DDX3XO00571 662 aaKnown RBP eCLIP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms