RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 PPFIA1Q13136 1202 aa20.52■□□□□ 0.88
HDAC6-208ENST00000438518 TARBP2Q15633 366 aaKnown RBP20.52■□□□□ 0.88
HDAC6-208ENST00000438518 NBPF20Q3BBV1 942 aa20.52■□□□□ 0.88
HDAC6-208ENST00000438518 LARP4BQ92615 738 aaKnown RBP20.52■□□□□ 0.88
HDAC6-208ENST00000438518 CEP170P1Q96L14 293 aa20.52■□□□□ 0.88
HDAC6-208ENST00000438518 LRRC27Q9C0I9 530 aa20.52■□□□□ 0.88
HDAC6-208ENST00000438518 CYP26B1Q9NR63 512 aa20.52■□□□□ 0.88
HDAC6-208ENST00000438518 LMBRD1Q9NUN5 540 aa20.52■□□□□ 0.88
HDAC6-208ENST00000438518 GTF2IRD1Q9UHL9 959 aa20.52■□□□□ 0.88
HDAC6-208ENST00000438518 ARHGEF35A5YM69 484 aa20.51■□□□□ 0.87
HDAC6-208ENST00000438518 ARVCFO00192 962 aa20.51■□□□□ 0.87
HDAC6-208ENST00000438518 MAGEB2O15479 319 aa20.51■□□□□ 0.87
HDAC6-208ENST00000438518 POLR2DO15514 142 aaKnown RBP20.51■□□□□ 0.87
HDAC6-208ENST00000438518 DGAT1O75907 488 aa20.51■□□□□ 0.87
HDAC6-208ENST00000438518 INSRRP14616 1297 aa20.51■□□□□ 0.87
HDAC6-208ENST00000438518 RFC5P40937 340 aa20.51■□□□□ 0.87
HDAC6-208ENST00000438518 GRIK4Q16099 956 aa20.51■□□□□ 0.87
HDAC6-208ENST00000438518 E2F4Q16254 413 aa20.51■□□□□ 0.87
HDAC6-208ENST00000438518 SYT2Q8N9I0 419 aaPredicted RBP20.51■□□□□ 0.87
HDAC6-208ENST00000438518 PIGOQ8TEQ8 1089 aa20.51■□□□□ 0.87
HDAC6-208ENST00000438518 RAD54LQ92698 747 aa20.51■□□□□ 0.87
HDAC6-208ENST00000438518 TIPINQ9BVW5 301 aa20.51■□□□□ 0.87
HDAC6-208ENST00000438518 TNMDQ9H2S6 317 aa20.51■□□□□ 0.87
HDAC6-208ENST00000438518 C17orf102A2RUQ5 167 aa20.5■□□□□ 0.87
HDAC6-208ENST00000438518 E9PMD0 336 aa20.5■□□□□ 0.87
HDAC6-208ENST00000438518 MCM4P33991 863 aa20.5■□□□□ 0.87
HDAC6-208ENST00000438518 NDUFA8P51970 172 aa20.5■□□□□ 0.87
HDAC6-208ENST00000438518 PSMC6P62333 389 aa20.5■□□□□ 0.87
HDAC6-208ENST00000438518 SNX17Q15036 470 aa20.5■□□□□ 0.87
HDAC6-208ENST00000438518 XKR9Q5GH70 373 aa20.5■□□□□ 0.87
HDAC6-208ENST00000438518 CEP57L1Q8IYX8 460 aa20.5■□□□□ 0.87
HDAC6-208ENST00000438518 PDILTQ8N807 584 aa20.5■□□□□ 0.87
HDAC6-208ENST00000438518 RETREG2Q8NC44 543 aa20.5■□□□□ 0.87
HDAC6-208ENST00000438518 SLC7A3Q8WY07 619 aa20.5■□□□□ 0.87
HDAC6-208ENST00000438518 SENP6Q9GZR1 1112 aaPredicted RBP20.5■□□□□ 0.87
HDAC6-208ENST00000438518 BHMT2Q9H2M3 363 aa20.5■□□□□ 0.87
HDAC6-208ENST00000438518 BLOC1S4Q9NUP1 217 aa20.5■□□□□ 0.87
HDAC6-208ENST00000438518 A0A087X0B3 334 aa20.49■□□□□ 0.87
HDAC6-208ENST00000438518 GADD45BO75293 160 aaPredicted RBP20.49■□□□□ 0.87
HDAC6-208ENST00000438518 PLA2G4BP0C869 781 aa20.49■□□□□ 0.87
HDAC6-208ENST00000438518 AMPD3Q01432 767 aa20.49■□□□□ 0.87
HDAC6-208ENST00000438518 TBC1D8BQ0IIM8 1120 aa20.49■□□□□ 0.87
HDAC6-208ENST00000438518 MTERF2Q49AM1 385 aa20.49■□□□□ 0.87
HDAC6-208ENST00000438518 NAALADL2Q58DX5 795 aa20.49■□□□□ 0.87
HDAC6-208ENST00000438518 FAM47CQ5HY64 1035 aa20.49■□□□□ 0.87
HDAC6-208ENST00000438518 KANK3Q6NY19 840 aa20.49■□□□□ 0.87
HDAC6-208ENST00000438518 SV2BQ7L1I2 683 aa20.49■□□□□ 0.87
HDAC6-208ENST00000438518 UBE2Q1Q7Z7E8 422 aa20.49■□□□□ 0.87
HDAC6-208ENST00000438518 FMR1NBQ8N0W7 255 aaPredicted RBP20.49■□□□□ 0.87
HDAC6-208ENST00000438518 LMBR1Q8WVP7 490 aa20.49■□□□□ 0.87
HDAC6-208ENST00000438518 DHX58Q96C10 678 aa20.49■□□□□ 0.87
HDAC6-208ENST00000438518 PAWRQ96IZ0 340 aaKnown RBP20.49■□□□□ 0.87
HDAC6-208ENST00000438518 TIGD1Q96MW7 591 aa20.49■□□□□ 0.87
HDAC6-208ENST00000438518 HDAC6Q9UBN7 1215 aa20.49■□□□□ 0.87
HDAC6-208ENST00000438518 GRIN2DO15399 1336 aa20.49■□□□□ 0.87
HDAC6-208ENST00000438518 MBLAC1A4D2B0 266 aaPredicted RBP20.48■□□□□ 0.87
HDAC6-208ENST00000438518 ZBTB42B2RXF5 422 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 MAFO75444 373 aaPredicted RBP20.48■□□□□ 0.87
HDAC6-208ENST00000438518 MBD3O95983 291 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 MYL1P05976 194 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 SLFN14P0C7P3 912 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 EN2P19622 333 aaPredicted RBP20.48■□□□□ 0.87
HDAC6-208ENST00000438518 CDK7P50613 346 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 POLGP54098 1239 aaPredicted RBP20.48■□□□□ 0.87
HDAC6-208ENST00000438518 SLC12A3P55017 1021 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 CHMP4BP1P59074 171 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 ADAM17P78536 824 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 PLA2G4FQ68DD2 849 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 SLC39A5Q6ZMH5 540 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 KCNK18Q7Z418 384 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 MCPH1Q8NEM0 835 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 ENGASEQ8NFI3 743 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 CEP89Q96ST8 783 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 PLIN2Q99541 437 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 GOLPH3LQ9H4A5 285 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 DHX33Q9H6R0 707 aaKnown RBP20.48■□□□□ 0.87
HDAC6-208ENST00000438518 TUBE1Q9UJT0 475 aa20.48■□□□□ 0.87
HDAC6-208ENST00000438518 IGKV6-21A0A0C4DH24 114 aa20.47■□□□□ 0.87
HDAC6-208ENST00000438518 TLR3O15455 904 aaKnown RBP20.47■□□□□ 0.87
HDAC6-208ENST00000438518 ZNF202O95125 648 aa20.47■□□□□ 0.87
HDAC6-208ENST00000438518 TMOD1P28289 359 aa20.47■□□□□ 0.87
HDAC6-208ENST00000438518 NPEPPSP55786 919 aa20.47■□□□□ 0.87
HDAC6-208ENST00000438518 TAF2Q6P1X5 1199 aa20.47■□□□□ 0.87
HDAC6-208ENST00000438518 TRMT1LQ7Z2T5 733 aaKnown RBP20.47■□□□□ 0.87
HDAC6-208ENST00000438518 ANKRD33Q7Z3H0 272 aa20.47■□□□□ 0.87
HDAC6-208ENST00000438518 ELOA2Q8IYF1 753 aaPredicted RBP20.47■□□□□ 0.87
HDAC6-208ENST00000438518 ZNF710Q8N1W2 664 aa20.47■□□□□ 0.87
HDAC6-208ENST00000438518 DIS3LQ8TF46 1054 aaKnown RBP20.47■□□□□ 0.87
HDAC6-208ENST00000438518 TCP11Q8WWU5 503 aa20.47■□□□□ 0.87
HDAC6-208ENST00000438518 TOX2Q96NM4 488 aa20.47■□□□□ 0.87
HDAC6-208ENST00000438518 PANK2Q9BZ23 570 aa20.47■□□□□ 0.87
HDAC6-208ENST00000438518 ATP6V0A4Q9HBG4 840 aa20.47■□□□□ 0.87
HDAC6-208ENST00000438518 BMP2KQ9NSY1 1161 aaPredicted RBP20.47■□□□□ 0.87
HDAC6-208ENST00000438518 SETD4Q9NVD3 440 aa20.47■□□□□ 0.87
HDAC6-208ENST00000438518 KBTBD4Q9NVX7 518 aa20.47■□□□□ 0.87
HDAC6-208ENST00000438518 ZBTB39O15060 712 aa20.46■□□□□ 0.87
HDAC6-208ENST00000438518 ACTN4O43707 911 aaKnown RBP20.46■□□□□ 0.87
HDAC6-208ENST00000438518 KINO60870 393 aaKnown RBP20.46■□□□□ 0.87
HDAC6-208ENST00000438518 C22orf31O95567 290 aa20.46■□□□□ 0.87
HDAC6-208ENST00000438518 GUCY2CP25092 1073 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms