RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 GLYCTKQ8IVS8 523 aa7.9□□□□□ -1.14
LSM3P3-201ENST00000436601 PDILTQ8N807 584 aa7.9□□□□□ -1.14
LSM3P3-201ENST00000436601 LRRC15Q8TF66 581 aa7.9□□□□□ -1.14
LSM3P3-201ENST00000436601 TRIM47Q96LD4 638 aa7.9□□□□□ -1.14
LSM3P3-201ENST00000436601 PNMA5Q96PV4 448 aa7.9□□□□□ -1.14
LSM3P3-201ENST00000436601 KATNBL1Q9H079 304 aa7.9□□□□□ -1.14
LSM3P3-201ENST00000436601 UNC45AQ9H3U1 944 aa7.9□□□□□ -1.14
LSM3P3-201ENST00000436601 TUT1Q9H6E5 874 aaKnown RBP7.9□□□□□ -1.14
LSM3P3-201ENST00000436601 FLRT1Q9NZU1 646 aa7.9□□□□□ -1.14
LSM3P3-201ENST00000436601 MYH6P13533 1939 aa7.9□□□□□ -1.15
LSM3P3-201ENST00000436601 DDX39AO00148 427 aaKnown RBP7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 GPR25O00155 361 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 ARIH2O95376 493 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 CCNE2O96020 404 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 SPATA31C1P0DKV0 1188 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 FCGRTP55899 365 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 SP3Q02447 781 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 GRB10Q13322 594 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 CAMK4Q16566 473 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 ECM1Q16610 540 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 NAALADL2Q58DX5 795 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 TMEM63BQ5T3F8 832 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 NCAPH2Q6IBW4 605 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 TAPT1Q6NXT6 567 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 CCDC62Q6P9F0 684 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 KRBA2Q6ZNG9 492 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 FBXO16Q8IX29 292 aaPredicted RBP7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 DHX58Q96C10 678 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 CDHR1Q96JP9 859 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 TIGD1Q96MW7 591 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 PLIN2Q99541 437 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 MPHOSPH6Q99547 160 aaKnown RBP7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 HSD17B14Q9BPX1 270 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 TEKT3Q9BXF9 490 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 RAB34Q9BZG1 259 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 CLSTN2Q9H4D0 955 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 PDGFCQ9NRA1 345 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 TBC1D22BQ9NU19 505 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 DDX19AQ9NUU7 478 aaKnown RBP7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 SERTAD1Q9UHV2 236 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 GABRQQ9UN88 632 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 TELO2Q9Y4R8 837 aa7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 COL11A1P12107 1806 aaPredicted RBP7.89□□□□□ -1.15
LSM3P3-201ENST00000436601 NFASCO94856 1347 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 FOXN1O15353 648 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 CHMP2AO43633 222 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 KINO60870 393 aaKnown RBP7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 MED24O75448 989 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 SLITRK3O94933 977 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 SLFN14P0C7P3 912 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 TGFB3P10600 412 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 CYP2B6P20813 491 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 UBA1P22314 1058 aaKnown RBP7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 TXLNAP40222 546 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 RGS2P41220 211 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 TRIM32Q13049 653 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 EPHA7Q15375 998 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 CCL14Q16627 93 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 LY6KQ17RY6 165 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 ZSCAN23Q3MJ62 389 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 TMEM119Q4V9L6 283 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 INTS6LQ5JSJ4 861 aaKnown RBP7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 HYIQ5T013 277 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 CCDC183Q5T5S1 534 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 RRAGBQ5VZM2 374 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 KRT79Q5XKE5 535 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 VASH1Q7L8A9 365 aaPredicted RBP7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 KCNK18Q7Z418 384 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 CATSPER3Q86XQ3 398 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 MSL3Q8N5Y2 521 aaKnown RBP7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 DNAJC5GQ8N7S2 189 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 IQUBQ8NA54 791 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 TSEN2Q8NCE0 465 aaKnown RBP7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 SNX29Q8TEQ0 813 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 SOCS4Q8WXH5 440 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 PAGE5Q96GU1 130 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 APBA2Q99767 749 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 SENP7Q9BQF6 1050 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 EIF2AK1Q9BQI3 630 aaKnown RBP7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 TINF2Q9BSI4 451 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 NUP62CLQ9H1M0 184 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 VTA1Q9NP79 307 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 DISC1Q9NRI5 854 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 SAGE1Q9NXZ1 904 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 SLC5A4Q9NY91 659 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 RGL1Q9NZL6 768 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 CCDC39Q9UFE4 941 aa7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 DDX41Q9UJV9 622 aaKnown RBP7.88□□□□□ -1.15
LSM3P3-201ENST00000436601 SYNGAP1Q96PV0 1343 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 SMCHD1A6NHR9 2005 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 A0A087WWV3 80 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 ANKRD33BA6NCL7 494 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 BACH1O14867 736 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 SLC26A4O43511 780 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 SORBS3O60504 671 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 XRCC5P13010 732 aaKnown RBP7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 PLCG1P19174 1290 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 IGFBP4P22692 258 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 PTGS1P23219 599 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 RPA1P27694 616 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms