RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 RALGAPA2Q2PPJ7 1873 aa12.34□□□□□ -0.43
HMGCL-204ENST00000436439 EFCAB14O75071 495 aa12.33□□□□□ -0.44
HMGCL-204ENST00000436439 ERVK-21P61565 698 aa12.33□□□□□ -0.44
HMGCL-204ENST00000436439 CEBPZQ03701 1054 aaKnown RBP12.33□□□□□ -0.44
HMGCL-204ENST00000436439 STK38Q15208 465 aa12.33□□□□□ -0.44
HMGCL-204ENST00000436439 UBE2SQ16763 222 aa12.33□□□□□ -0.44
HMGCL-204ENST00000436439 TTC38Q5R3I4 469 aa12.33□□□□□ -0.44
HMGCL-204ENST00000436439 UTP14CQ5TAP6 766 aaKnown RBP12.33□□□□□ -0.44
HMGCL-204ENST00000436439 ADALQ6DHV7 355 aa12.33□□□□□ -0.44
HMGCL-204ENST00000436439 NEK8Q86SG6 692 aa12.33□□□□□ -0.44
HMGCL-204ENST00000436439 MYOCDQ8IZQ8 938 aa12.33□□□□□ -0.44
HMGCL-204ENST00000436439 EMSYQ7Z589 1322 aa12.33□□□□□ -0.44
HMGCL-204ENST00000436439 TTC28Q96AY4 2481 aa12.32□□□□□ -0.44
HMGCL-204ENST00000436439 KCNA2P16389 499 aa12.32□□□□□ -0.44
HMGCL-204ENST00000436439 ITGB5P18084 799 aa12.32□□□□□ -0.44
HMGCL-204ENST00000436439 INF2Q27J81 1249 aa12.32□□□□□ -0.44
HMGCL-204ENST00000436439 JAKMIP3Q5VZ66 844 aa12.32□□□□□ -0.44
HMGCL-204ENST00000436439 GPT2Q8TD30 523 aa12.32□□□□□ -0.44
HMGCL-204ENST00000436439 TBCKQ8TEA7 893 aa12.32□□□□□ -0.44
HMGCL-204ENST00000436439 LMBR1Q8WVP7 490 aa12.32□□□□□ -0.44
HMGCL-204ENST00000436439 CRYGNQ8WXF5 182 aa12.32□□□□□ -0.44
HMGCL-204ENST00000436439 SYAP1Q96A49 352 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-204ENST00000436439 PGBD1Q96JS3 809 aa12.32□□□□□ -0.44
HMGCL-204ENST00000436439 TGS1Q96RS0 853 aaKnown RBP12.32□□□□□ -0.44
HMGCL-204ENST00000436439 NAP1L4Q99733 375 aaKnown RBP12.32□□□□□ -0.44
HMGCL-204ENST00000436439 SENP7Q9BQF6 1050 aa12.32□□□□□ -0.44
HMGCL-204ENST00000436439 C17orf80Q9BSJ5 609 aa12.32□□□□□ -0.44
HMGCL-204ENST00000436439 GRPEL1Q9HAV7 217 aa12.32□□□□□ -0.44
HMGCL-204ENST00000436439 TMEM260Q9NX78 707 aa12.32□□□□□ -0.44
HMGCL-204ENST00000436439 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-204ENST00000436439 A0A1W2PQ27 194 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 A0A1W2PQ64 194 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 A0A1W2PQD8 194 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 GSTTP1A0A1W2PQM5 241 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 LAD1O00515 517 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 WNT7AO00755 349 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 GADD45BO75293 160 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-204ENST00000436439 TCF7P36402 384 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-204ENST00000436439 ME1P48163 572 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 USP11P51784 963 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 HTRA4P83105 476 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-204ENST00000436439 ARHGAP4P98171 946 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 ATP2C1P98194 919 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-204ENST00000436439 ARL6IP4Q66PJ3 421 aaKnown RBP12.31□□□□□ -0.44
HMGCL-204ENST00000436439 PPP4R3AQ6IN85 833 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 CAVIN1Q6NZI2 390 aaKnown RBP12.31□□□□□ -0.44
HMGCL-204ENST00000436439 XRRA1Q6P2D8 792 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 MOXD1Q6UVY6 613 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 NLRX1Q86UT6 975 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 ANO3Q9BYT9 981 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 PCDHA7Q9UN72 937 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 INSL6Q9Y581 213 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 UBIAD1Q9Y5Z9 338 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 KIAA1671Q9BY89 1806 aa12.31□□□□□ -0.44
HMGCL-204ENST00000436439 GOLGA6L4A6NEF3 574 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 EDIL3O43854 480 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 CUTAO60888 179 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 AMHP03971 560 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 XRCC6P12956 609 aaKnown RBP eCLIP12.3□□□□□ -0.44
HMGCL-204ENST00000436439 GCFC2P16383 781 aaKnown RBP12.3□□□□□ -0.44
HMGCL-204ENST00000436439 SREBF1P36956 1147 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 PRPHP41219 470 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 AAK1Q2M2I8 961 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 ZSCAN23Q3MJ62 389 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 AXDND1Q5T1B0 1012 aaPredicted RBP12.3□□□□□ -0.44
HMGCL-204ENST00000436439 RUFY4Q6ZNE9 571 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 C4orf32Q8N8J7 132 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 ZNF579Q8NAF0 562 aaKnown RBP12.3□□□□□ -0.44
HMGCL-204ENST00000436439 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
HMGCL-204ENST00000436439 HLA-CQ95604 372 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 GPRASP2Q96D09 838 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 LMCD1Q9NZU5 365 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 PKD2L1Q9P0L9 805 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 RAPGEFL1Q9UHV5 662 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 ZNF215Q9UL58 517 aaPredicted RBP12.3□□□□□ -0.44
HMGCL-204ENST00000436439 COG5Q9UP83 839 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 SRPRBQ9Y5M8 271 aaKnown RBP12.3□□□□□ -0.44
HMGCL-204ENST00000436439 COL4A6Q14031 1691 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 CYP3A7-CYP3A51PA0A087WV96 503 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 SPDYE3A6NKU9 549 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 CAND2O75155 1236 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 UPP2O95045 317 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 CHRNA1P02708 482 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 CYP3A4P08684 503 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 GNAT1P11488 350 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 COL9A1P20849 921 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 CYP3A7P24462 503 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 MARK3P27448 753 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 PTGDRQ13258 359 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 ZNF174Q15697 407 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 FAM26DQ5JW98 314 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 KRI1Q8N9T8 703 aaKnown RBP12.3□□□□□ -0.44
HMGCL-204ENST00000436439 SEPT8Q92599 483 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 TOP1MTQ969P6 601 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 ZBTB10Q96DT7 871 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 MBOAT7Q96N66 472 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 EHMT1Q9H9B1 1298 aa12.3□□□□□ -0.44
HMGCL-204ENST00000436439 FBXO2Q9UK22 296 aaPredicted RBP12.3□□□□□ -0.44
HMGCL-204ENST00000436439 NRCAMQ92823 1304 aa12.29□□□□□ -0.44
HMGCL-204ENST00000436439 FAM237AA0A1B0GTK4 181 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms