RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 ARRDC4Q8NCT1 418 aa5.88□□□□□ -1.47
HMGB1P45-201ENST00000435986 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.88□□□□□ -1.47
HMGB1P45-201ENST00000435986 HSPBAP1Q96EW2 488 aa5.88□□□□□ -1.47
HMGB1P45-201ENST00000435986 INTS4Q96HW7 963 aaKnown RBP5.88□□□□□ -1.47
HMGB1P45-201ENST00000435986 PSMD1Q99460 953 aa5.88□□□□□ -1.47
HMGB1P45-201ENST00000435986 RNF32Q9H0A6 362 aa5.88□□□□□ -1.47
HMGB1P45-201ENST00000435986 PRDM11Q9NQV5 511 aa5.88□□□□□ -1.47
HMGB1P45-201ENST00000435986 C19orf73Q9NVV2 129 aa5.88□□□□□ -1.47
HMGB1P45-201ENST00000435986 NOB1Q9ULX3 412 aaKnown RBP5.88□□□□□ -1.47
HMGB1P45-201ENST00000435986 PRAMEF22A3QJZ6 481 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 GOLGA6L22H0YM25 854 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 MYL1P05976 194 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 MMEP08473 750 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 PF4V1P10720 104 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 HSPA6P17066 643 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 ITGB5P18084 799 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 BCAR1P56945 870 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 ADCY2Q08462 1091 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 DBPQ10586 325 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 TIGD5Q53EQ6 642 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 PRAMEF18Q5VWM3 479 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 PRAMEF9Q5VWM5 478 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 VASNQ6EMK4 673 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 ESRP1Q6NXG1 681 aaKnown RBP5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 RPTNQ6XPR3 784 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 ATG4DQ86TL0 474 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 AMIGO3Q86WK7 504 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 MAGEB6Q8N7X4 407 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 ASB15Q8WXK1 588 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 SHISA4Q96DD7 197 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 FOXB1Q99853 325 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 RHOBTB2Q9BYZ6 727 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 HSPBP1Q9NZL4 362 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 ADAMTS6Q9UKP5 1117 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 SYNPO2Q9UMS6 1093 aa5.87□□□□□ -1.47
HMGB1P45-201ENST00000435986 HRKO00198 91 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 ERC2O15083 957 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 PRPF6O94906 941 aaKnown RBP5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 XPAP23025 273 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 PTGS1P23219 599 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 AKAP5P24588 427 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 AOAHP28039 575 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 GPR3P46089 330 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 SLC16A1P53985 500 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 MRPS9P82933 396 aaKnown RBP5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 OS9Q13438 667 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 LRRC41Q15345 812 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 PCBP2Q15366 365 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 SEC23AQ15436 765 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 TARBP2Q15633 366 aaKnown RBP5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 SLFN12LQ6IEE8 588 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 KIAA1841Q6NSI8 718 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 FAM180AQ6UWF9 173 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 DPP8Q6V1X1 898 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 TTC8Q8TAM2 541 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 AUTS2Q8WXX7 1259 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 CLIP3Q96DZ5 547 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 ZNF496Q96IT1 587 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 PAWRQ96IZ0 340 aaKnown RBP5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 FMNL2Q96PY5 1086 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 POLR3GLQ9BT43 218 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 RTFDC1Q9BY42 306 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 ANO3Q9BYT9 981 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 RXFP1Q9HBX9 757 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 CCM2LQ9NUG4 571 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 SAP30BPQ9UHR5 308 aaKnown RBP5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 TELO2Q9Y4R8 837 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 GPR45Q9Y5Y3 372 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 NUMBLQ9Y6R0 609 aa5.86□□□□□ -1.47
HMGB1P45-201ENST00000435986 ACOT7O00154 380 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 DTNBO60941 627 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 NCAM1P13591 858 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 GNALP38405 381 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 MANFP55145 182 aaKnown RBP5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 SLC6A3Q01959 620 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 ALDH6A1Q02252 535 aaKnown RBP5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 MAP3K12Q12852 859 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 SPIDRQ14159 915 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 PDCD1Q15116 288 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 KCNMB1Q16558 191 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 PLEKHN1Q494U1 663 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 FSTL4Q6MZW2 842 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 PPP4R4Q6NUP7 873 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 CCDC62Q6P9F0 684 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 SLC4A10Q6U841 1118 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 C14orf80Q86SX3 495 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 MIB1Q86YT6 1006 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 CILP2Q8IUL8 1156 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 TGFBRAP1Q8WUH2 860 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 AIFM3Q96NN9 605 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 WRNIP1Q96S55 665 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 ORAI2Q96SN7 254 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 POFUT1Q9H488 388 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 GABBR1Q9UBS5 961 aa5.85□□□□□ -1.47
HMGB1P45-201ENST00000435986 NRP2O60462 931 aa5.84□□□□□ -1.47
HMGB1P45-201ENST00000435986 CYP7B1O75881 506 aa5.84□□□□□ -1.47
HMGB1P45-201ENST00000435986 GLI1P08151 1106 aa5.84□□□□□ -1.47
HMGB1P45-201ENST00000435986 TMEM253P0C7T8 217 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms