RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ADCY1Q08828 1119 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 AARS2Q5JTZ9 985 aaKnown RBP11.98□□□□□ -0.49
SCN4A-201ENST00000435607 TTC13Q8NBP0 860 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 PBKQ96KB5 322 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 ARHGEF9O43307 516 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 GDF11O95390 407 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 EHHADHQ08426 723 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 CDO1Q16878 200 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 OOSP2Q86WS3 158 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 CCDC197Q8NCU1 140 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 CAPS2Q9BXY5 557 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 ZC3H4Q9UPT8 1303 aaKnown RBP11.98□□□□□ -0.49
SCN4A-201ENST00000435607 CLTAP09496 248 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 IL6STP40189 918 aaPredicted RBP11.97□□□□□ -0.49
SCN4A-201ENST00000435607 DPYDQ12882 1025 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 TJAP1Q5JTD0 557 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 FAF2Q96CS3 445 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 MMP19Q99542 508 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 TM6SF1Q9BZW5 370 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 TRIM4Q9C037 500 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 FCER1AP12319 257 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 KRT4P19013 534 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 IRAK1BP1Q5VVH5 260 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 ECT2Q9H8V3 914 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 G3BP2Q9UN86 482 aaKnown RBP11.97□□□□□ -0.49
SCN4A-201ENST00000435607 RBM6P78332 1123 aaKnown RBP11.97□□□□□ -0.49
SCN4A-201ENST00000435607 MORF4L2Q15014 288 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 CYP4F22Q6NT55 531 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 PPP4R3CPQ6ZMV5 832 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 MASTLQ96GX5 879 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 ZNF496Q96IT1 587 aaPredicted RBP11.97□□□□□ -0.49
SCN4A-201ENST00000435607 ING2Q9H160 280 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 PCIF1Q9H4Z3 704 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 ATP6V0A4Q9HBG4 840 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 CCDC78A2IDD5 438 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 SKIP12755 728 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 CDC42EP1Q00587 391 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 UBE3CQ15386 1083 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 ITPRIPL1Q6GPH6 555 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 TSPYL6Q8N831 410 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 RMDN2Q96LZ7 410 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 SNX5Q9Y5X3 404 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 RAPGEF6Q8TEU7 1601 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 KRT37O76014 449 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 RASSF7Q02833 373 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 NAA35Q5VZE5 725 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 PKN3Q6P5Z2 889 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 TUBGCP2Q9BSJ2 902 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 NBPF20Q3BBV1 942 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 SYTL3Q4VX76 610 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 NBPF10Q6P3W6 841 aaKnown RBP11.97□□□□□ -0.49
SCN4A-201ENST00000435607 HAUS6Q7Z4H7 955 aa11.97□□□□□ -0.49
SCN4A-201ENST00000435607 EXOC1LA0A1B0GW35 172 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 POTEB3A0JP26 581 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 PFKFB1P16118 471 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 PRAMEP78395 509 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 POTEBQ6S5H4 581 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 SKAP1Q86WV1 359 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 COA1Q9GZY4 146 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 EPN1Q9Y6I3 576 aaPredicted RBP11.96□□□□□ -0.49
SCN4A-201ENST00000435607 TRPA1O75762 1119 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 TFDP2Q14188 446 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 PTPROQ16827 1216 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 TADA1Q96BN2 335 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 PPP1R13BQ96KQ4 1090 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 MED4Q9NPJ6 270 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 CFLARO15519 480 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 DDIT3P35638 169 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 MAN2A1Q16706 1144 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 UHMK1Q8TAS1 419 aaKnown RBP11.96□□□□□ -0.49
SCN4A-201ENST00000435607 OAS2P29728 719 aaKnown RBP11.96□□□□□ -0.49
SCN4A-201ENST00000435607 GUCY2DQ02846 1103 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 OCA2Q04671 838 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 ZNF699Q32M78 642 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 TMEM179Q6ZVK1 233 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 TEX2Q8IWB9 1127 aa11.96□□□□□ -0.49
SCN4A-201ENST00000435607 SYMPKQ92797 1274 aaKnown RBP11.96□□□□□ -0.49
SCN4A-201ENST00000435607 TPX2Q9ULW0 747 aaKnown RBP11.96□□□□□ -0.49
SCN4A-201ENST00000435607 PGRMC1O00264 195 aaKnown RBP11.96□□□□□ -0.5
SCN4A-201ENST00000435607 RALBP11234 206 aa11.96□□□□□ -0.5
SCN4A-201ENST00000435607 ZNF568Q3ZCX4 644 aa11.96□□□□□ -0.5
SCN4A-201ENST00000435607 KCNV1Q6PIU1 500 aa11.96□□□□□ -0.5
SCN4A-201ENST00000435607 FOXP1Q9H334 677 aaPredicted RBP11.96□□□□□ -0.5
SCN4A-201ENST00000435607 COL17A1Q9UMD9 1497 aaPredicted RBP11.96□□□□□ -0.5
SCN4A-201ENST00000435607 SPDYE5A6NIY4 337 aa11.96□□□□□ -0.5
SCN4A-201ENST00000435607 GUCA1CO95843 209 aa11.96□□□□□ -0.5
SCN4A-201ENST00000435607 SPDYE7PQ495Y7 208 aa11.96□□□□□ -0.5
SCN4A-201ENST00000435607 MIGA2Q7L4E1 593 aa11.96□□□□□ -0.5
SCN4A-201ENST00000435607 CHMP1BQ7LBR1 199 aa11.96□□□□□ -0.5
SCN4A-201ENST00000435607 CMTR1Q8N1G2 835 aaKnown RBP11.96□□□□□ -0.5
SCN4A-201ENST00000435607 RNF26Q9BY78 433 aaPredicted RBP11.96□□□□□ -0.5
SCN4A-201ENST00000435607 ANLNQ9NQW6 1124 aa11.96□□□□□ -0.5
SCN4A-201ENST00000435607 MAN1A2O60476 641 aa11.95□□□□□ -0.5
SCN4A-201ENST00000435607 PFDN1O60925 122 aa11.95□□□□□ -0.5
SCN4A-201ENST00000435607 ZNF235Q14590 738 aa11.95□□□□□ -0.5
SCN4A-201ENST00000435607 WDR75Q8IWA0 830 aaKnown RBP11.95□□□□□ -0.5
SCN4A-201ENST00000435607 KATNAL1Q9BW62 490 aa11.95□□□□□ -0.5
SCN4A-201ENST00000435607 BSDC1Q9NW68 430 aaPredicted RBP11.95□□□□□ -0.5
SCN4A-201ENST00000435607 FEM1BQ9UK73 627 aa11.95□□□□□ -0.5
SCN4A-201ENST00000435607 CAPN7Q9Y6W3 813 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms