RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 EML1O00423 815 aa18.27■□□□□ 0.52
SMPD4-207ENST00000435455 PSMC5P62195 406 aa18.27■□□□□ 0.52
SMPD4-207ENST00000435455 TCTN1Q2MV58 587 aa18.27■□□□□ 0.52
SMPD4-207ENST00000435455 FBXO47Q5MNV8 452 aa18.27■□□□□ 0.52
SMPD4-207ENST00000435455 HERC6Q8IVU3 1022 aa18.27■□□□□ 0.52
SMPD4-207ENST00000435455 USP38Q8NB14 1042 aa18.27■□□□□ 0.52
SMPD4-207ENST00000435455 IFIH1Q9BYX4 1025 aaKnown RBP18.27■□□□□ 0.52
SMPD4-207ENST00000435455 TTYH1Q9H313 450 aaPredicted RBP18.27■□□□□ 0.52
SMPD4-207ENST00000435455 SMC3Q9UQE7 1217 aa18.27■□□□□ 0.52
SMPD4-207ENST00000435455 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.27■□□□□ 0.52
SMPD4-207ENST00000435455 KDM3AQ9Y4C1 1321 aa18.26■□□□□ 0.51
SMPD4-207ENST00000435455 P4HBP07237 508 aaKnown RBP18.26■□□□□ 0.51
SMPD4-207ENST00000435455 GHRP10912 638 aa18.26■□□□□ 0.51
SMPD4-207ENST00000435455 ATP2B1P20020 1258 aa18.26■□□□□ 0.51
SMPD4-207ENST00000435455 U2AF2P26368 475 aaKnown RBP eCLIP18.26■□□□□ 0.51
SMPD4-207ENST00000435455 GJB2P29033 226 aa18.26■□□□□ 0.51
SMPD4-207ENST00000435455 QARSP47897 775 aaKnown RBP18.26■□□□□ 0.51
SMPD4-207ENST00000435455 TRAPPC10P48553 1259 aa18.26■□□□□ 0.51
SMPD4-207ENST00000435455 LPIN1Q14693 890 aa18.26■□□□□ 0.51
SMPD4-207ENST00000435455 EPHA7Q15375 998 aa18.26■□□□□ 0.51
SMPD4-207ENST00000435455 NCAPH2Q6IBW4 605 aa18.26■□□□□ 0.51
SMPD4-207ENST00000435455 TSHZ1Q6ZSZ6 1077 aa18.26■□□□□ 0.51
SMPD4-207ENST00000435455 KIAA0319LQ8IZA0 1049 aa18.26■□□□□ 0.51
SMPD4-207ENST00000435455 FAM161BQ96MY7 647 aa18.26■□□□□ 0.51
SMPD4-207ENST00000435455 NIFKQ9BYG3 293 aaKnown RBP18.26■□□□□ 0.51
SMPD4-207ENST00000435455 CELF4Q9BZC1 486 aaKnown RBP18.26■□□□□ 0.51
SMPD4-207ENST00000435455 SLC28A3Q9HAS3 691 aa18.26■□□□□ 0.51
SMPD4-207ENST00000435455 NOL7Q9UMY1 257 aaKnown RBP18.26■□□□□ 0.51
SMPD4-207ENST00000435455 PCDHA12Q9UN75 941 aa18.26■□□□□ 0.51
SMPD4-207ENST00000435455 WNT7AO00755 349 aa18.25■□□□□ 0.51
SMPD4-207ENST00000435455 TMOD1P28289 359 aa18.25■□□□□ 0.51
SMPD4-207ENST00000435455 MCM7P33993 719 aa18.25■□□□□ 0.51
SMPD4-207ENST00000435455 RABGGTBP53611 331 aa18.25■□□□□ 0.51
SMPD4-207ENST00000435455 DEFB103AP81534 67 aa18.25■□□□□ 0.51
SMPD4-207ENST00000435455 SPIRE1Q08AE8 756 aa18.25■□□□□ 0.51
SMPD4-207ENST00000435455 TBC1D8BQ0IIM8 1120 aa18.25■□□□□ 0.51
SMPD4-207ENST00000435455 TARBP2Q15633 366 aaKnown RBP18.25■□□□□ 0.51
SMPD4-207ENST00000435455 ZNF710Q8N1W2 664 aa18.25■□□□□ 0.51
SMPD4-207ENST00000435455 METTL13Q8N6R0 699 aa18.25■□□□□ 0.51
SMPD4-207ENST00000435455 BANK1Q8NDB2 785 aa18.25■□□□□ 0.51
SMPD4-207ENST00000435455 MAP7D2Q96T17 732 aa18.25■□□□□ 0.51
SMPD4-207ENST00000435455 ZBED2Q9BTP6 218 aa18.25■□□□□ 0.51
SMPD4-207ENST00000435455 OSBPL7Q9BZF2 842 aa18.25■□□□□ 0.51
SMPD4-207ENST00000435455 NKX2-4Q9H2Z4 354 aa18.25■□□□□ 0.51
SMPD4-207ENST00000435455 ZNF576Q9H609 170 aa18.25■□□□□ 0.51
SMPD4-207ENST00000435455 SEPT9Q9UHD8 586 aaPredicted RBP18.25■□□□□ 0.51
SMPD4-207ENST00000435455 YBX2Q9Y2T7 364 aaKnown RBP18.25■□□□□ 0.51
SMPD4-207ENST00000435455 DDX11L8A8MPP1 907 aa18.24■□□□□ 0.51
SMPD4-207ENST00000435455 AMHP03971 560 aa18.24■□□□□ 0.51
SMPD4-207ENST00000435455 TMEM62Q0P6H9 643 aa18.24■□□□□ 0.51
SMPD4-207ENST00000435455 MKRN4PQ13434 485 aaPredicted RBP18.24■□□□□ 0.51
SMPD4-207ENST00000435455 EFCAB12Q6NXP0 572 aa18.24■□□□□ 0.51
SMPD4-207ENST00000435455 FAM43BQ6ZT52 329 aaPredicted RBP18.24■□□□□ 0.51
SMPD4-207ENST00000435455 MTMR9Q96QG7 549 aa18.24■□□□□ 0.51
SMPD4-207ENST00000435455 TTC12Q9H892 705 aaPredicted RBP18.24■□□□□ 0.51
SMPD4-207ENST00000435455 H3BQV1 296 aa18.23■□□□□ 0.51
SMPD4-207ENST00000435455 TLL1O43897 1013 aa18.23■□□□□ 0.51
SMPD4-207ENST00000435455 STBD1O95210 358 aa18.23■□□□□ 0.51
SMPD4-207ENST00000435455 TXKP42681 527 aa18.23■□□□□ 0.51
SMPD4-207ENST00000435455 CLCN3P51790 818 aa18.23■□□□□ 0.51
SMPD4-207ENST00000435455 CUL4AQ13619 759 aa18.23■□□□□ 0.51
SMPD4-207ENST00000435455 MTERF2Q49AM1 385 aa18.23■□□□□ 0.51
SMPD4-207ENST00000435455 TTC38Q5R3I4 469 aa18.23■□□□□ 0.51
SMPD4-207ENST00000435455 NEK9Q8TD19 979 aa18.23■□□□□ 0.51
SMPD4-207ENST00000435455 GUCD1Q96NT3 240 aa18.23■□□□□ 0.51
SMPD4-207ENST00000435455 JPH2Q9BR39 696 aaPredicted RBP18.23■□□□□ 0.51
SMPD4-207ENST00000435455 LXNQ9BS40 222 aa18.23■□□□□ 0.51
SMPD4-207ENST00000435455 STXBP5LQ9Y2K9 1186 aa18.23■□□□□ 0.51
SMPD4-207ENST00000435455 PPME1Q9Y570 386 aa18.23■□□□□ 0.51
SMPD4-207ENST00000435455 GJB5O95377 273 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 MYOGP15173 224 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 CD52P31358 61 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 CRYBB1P53674 252 aaPredicted RBP18.22■□□□□ 0.51
SMPD4-207ENST00000435455 ZNF174Q15697 407 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 ODR4Q5SWX8 454 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 PPP2R2DQ66LE6 453 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 MCTP1Q6DN14 999 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 ANO5Q75V66 913 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 C4orf19Q8IY42 314 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 MYOCDQ8IZQ8 938 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 LINC01465Q8N7H1 131 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 DYDC2Q96IM9 177 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 RAD9AQ99638 391 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 TMEM60Q9H2L4 133 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 ZSWIM4Q9H7M6 989 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 AKT3Q9Y243 479 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 CHD7Q9P2D1 2997 aa18.22■□□□□ 0.51
SMPD4-207ENST00000435455 VTNP04004 478 aa18.21■□□□□ 0.51
SMPD4-207ENST00000435455 CA3P07451 260 aa18.21■□□□□ 0.51
SMPD4-207ENST00000435455 OR52Z1P0C646 297 aa18.21■□□□□ 0.51
SMPD4-207ENST00000435455 DNM2P50570 870 aa18.21■□□□□ 0.51
SMPD4-207ENST00000435455 PAK2Q13177 524 aa18.21■□□□□ 0.51
SMPD4-207ENST00000435455 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.21■□□□□ 0.51
SMPD4-207ENST00000435455 OTUD6AQ7L8S5 288 aa18.21■□□□□ 0.51
SMPD4-207ENST00000435455 EXOC8Q8IYI6 725 aa18.21■□□□□ 0.51
SMPD4-207ENST00000435455 LRRC71Q8N4P6 559 aa18.21■□□□□ 0.51
SMPD4-207ENST00000435455 CEP89Q96ST8 783 aa18.21■□□□□ 0.51
SMPD4-207ENST00000435455 CDX2Q99626 313 aaPredicted RBP18.21■□□□□ 0.51
SMPD4-207ENST00000435455 EIF2AK1Q9BQI3 630 aaKnown RBP18.21■□□□□ 0.51
SMPD4-207ENST00000435455 FTHL17Q9BXU8 183 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms