RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 ZNF720Q7Z2F6 126 aa18.34■□□□□ 0.53
LIMK1-203ENST00000435201 NOA1Q8NC60 698 aaKnown RBP18.34■□□□□ 0.53
LIMK1-203ENST00000435201 GOLGA5Q8TBA6 731 aa18.34■□□□□ 0.53
LIMK1-203ENST00000435201 ZFP91Q96JP5 570 aaPredicted RBP18.34■□□□□ 0.53
LIMK1-203ENST00000435201 RHOXF2Q9BQY4 288 aa18.34■□□□□ 0.53
LIMK1-203ENST00000435201 MLXIPQ9HAP2 919 aa18.34■□□□□ 0.53
LIMK1-203ENST00000435201 JADE2Q9NQC1 790 aa18.34■□□□□ 0.53
LIMK1-203ENST00000435201 PPP1R9AQ9ULJ8 1098 aa18.34■□□□□ 0.53
LIMK1-203ENST00000435201 SNX12Q9UMY4 172 aa18.34■□□□□ 0.53
LIMK1-203ENST00000435201 CTDP1Q9Y5B0 961 aaPredicted RBP18.34■□□□□ 0.53
LIMK1-203ENST00000435201 UBIAD1Q9Y5Z9 338 aa18.34■□□□□ 0.53
LIMK1-203ENST00000435201 BZW2Q9Y6E2 419 aaKnown RBP18.34■□□□□ 0.53
LIMK1-203ENST00000435201 GOLGB1Q14789 3259 aaKnown RBP18.34■□□□□ 0.53
LIMK1-203ENST00000435201 ZBTB39O15060 712 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 CLIC2O15247 247 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 FLOT1O75955 427 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 MOCS3O95396 460 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 P4HBP07237 508 aaKnown RBP18.33■□□□□ 0.53
LIMK1-203ENST00000435201 PLA2G4AP47712 749 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 KCNA1Q09470 495 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 KLHL30Q0D2K2 578 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 SLC18A3Q16572 532 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 TKFCQ3LXA3 575 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 KLHDC7AQ5VTJ3 777 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 CPXCR1Q8N123 301 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 BANK1Q8NDB2 785 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 CAGE1Q8TC20 777 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 SYTL5Q8TDW5 730 aaPredicted RBP18.33■□□□□ 0.53
LIMK1-203ENST00000435201 SLC35C1Q96A29 364 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 NOX5Q96PH1 765 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 FIZ1Q96SL8 496 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 MMS19Q96T76 1030 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 RAVER2Q9HCJ3 691 aaKnown RBP18.33■□□□□ 0.53
LIMK1-203ENST00000435201 AGO4Q9HCK5 861 aaKnown RBP18.33■□□□□ 0.53
LIMK1-203ENST00000435201 PCDHB13Q9Y5F0 798 aa18.33■□□□□ 0.53
LIMK1-203ENST00000435201 SRGAP2O75044 1071 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 ZBED4O75132 1171 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 ZBTB7AO95365 584 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 EGFRP00533 1210 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 UCHL3P15374 230 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 VCAM1P19320 739 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 MCM3P25205 808 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 PON1P27169 355 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 CASP4P49662 377 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 ODR4Q5SWX8 454 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 TCERG1LQ5VWI1 586 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 DCAF15Q66K64 600 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 DPY19L2P1Q6NXN4 242 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 WDR93Q6P2C0 686 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 MICALL2Q8IY33 904 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 FAM186BQ8IYM0 893 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 FAM133AQ8N9E0 248 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 SPAG5Q96R06 1193 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 BCAS3Q9H6U6 928 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 POLD4Q9HCU8 107 aa18.33■□□□□ 0.52
LIMK1-203ENST00000435201 SCAF8Q9UPN6 1271 aaKnown RBP18.33■□□□□ 0.52
LIMK1-203ENST00000435201 LTBP3Q9NS15 1303 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 DDX39AO00148 427 aaKnown RBP18.32■□□□□ 0.52
LIMK1-203ENST00000435201 DHX15O43143 795 aaKnown RBP18.32■□□□□ 0.52
LIMK1-203ENST00000435201 SLC9A1P19634 815 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 ANXA13P27216 316 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 GMPSP49915 693 aaPredicted RBP18.32■□□□□ 0.52
LIMK1-203ENST00000435201 APBA1Q02410 837 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 RASSF7Q02833 373 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 ZC2HC1CQ53FD0 456 aaPredicted RBP18.32■□□□□ 0.52
LIMK1-203ENST00000435201 C10orf76Q5T2E6 689 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 GPIHBP1Q8IV16 184 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 IL31RAQ8NI17 732 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 BORCS6Q96GS4 357 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 CAPZA3Q96KX2 299 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 FUT8Q9BYC5 575 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 PRDM10Q9NQV6 1147 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 TBC1D22BQ9NU19 505 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 HACL1Q9UJ83 578 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 TSKSQ9UJT2 592 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 DBR1Q9UK59 544 aaKnown RBP18.32■□□□□ 0.52
LIMK1-203ENST00000435201 PARP14Q460N5 1801 aa18.32■□□□□ 0.52
LIMK1-203ENST00000435201 SASH3O75995 380 aa18.31■□□□□ 0.52
LIMK1-203ENST00000435201 TCP1P17987 556 aaKnown RBP18.31■□□□□ 0.52
LIMK1-203ENST00000435201 MTMR1Q13613 665 aa18.31■□□□□ 0.52
LIMK1-203ENST00000435201 MTMR2Q13614 643 aa18.31■□□□□ 0.52
LIMK1-203ENST00000435201 ALCAMQ13740 583 aa18.31■□□□□ 0.52
LIMK1-203ENST00000435201 PADI6Q6TGC4 694 aa18.31■□□□□ 0.52
LIMK1-203ENST00000435201 HYOU1Q9Y4L1 999 aa18.31■□□□□ 0.52
LIMK1-203ENST00000435201 TARSL2A2RTX5 802 aaKnown RBP18.31■□□□□ 0.52
LIMK1-203ENST00000435201 HIP1RO75146 1068 aa18.31■□□□□ 0.52
LIMK1-203ENST00000435201 LYPLA2O95372 231 aa18.31■□□□□ 0.52
LIMK1-203ENST00000435201 MAPTP10636 758 aaKnown RBP18.31■□□□□ 0.52
LIMK1-203ENST00000435201 ACTN1P12814 892 aa18.31■□□□□ 0.52
LIMK1-203ENST00000435201 MRPS9P82933 396 aaKnown RBP18.31■□□□□ 0.52
LIMK1-203ENST00000435201 ITIH3Q06033 890 aa18.31■□□□□ 0.52
LIMK1-203ENST00000435201 MUM1L1Q5H9M0 696 aa18.31■□□□□ 0.52
LIMK1-203ENST00000435201 BEND6Q5SZJ8 279 aaPredicted RBP18.31■□□□□ 0.52
LIMK1-203ENST00000435201 MTFR1LQ9H019 292 aa18.31■□□□□ 0.52
LIMK1-203ENST00000435201 RPAP3Q9H6T3 665 aaPredicted RBP18.31■□□□□ 0.52
LIMK1-203ENST00000435201 AS3MTQ9HBK9 375 aa18.31■□□□□ 0.52
LIMK1-203ENST00000435201 GCNT4Q9P109 453 aa18.31■□□□□ 0.52
LIMK1-203ENST00000435201 PRKCIP41743 596 aa18.3■□□□□ 0.52
LIMK1-203ENST00000435201 RPS6P62753 249 aaKnown RBP18.3■□□□□ 0.52
LIMK1-203ENST00000435201 VSNL1P62760 191 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms