RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 RAB21Q9UL25 225 aa20.47■□□□□ 0.87
FAM3A-212ENST00000434658 RLFQ13129 1914 aa20.47■□□□□ 0.87
FAM3A-212ENST00000434658 FRMD3A2A2Y4 597 aa20.46■□□□□ 0.87
FAM3A-212ENST00000434658 SSBP05455 408 aaKnown RBP eCLIP20.46■□□□□ 0.87
FAM3A-212ENST00000434658 CYP11B2P19099 503 aa20.46■□□□□ 0.87
FAM3A-212ENST00000434658 SREBF1P36956 1147 aa20.46■□□□□ 0.87
FAM3A-212ENST00000434658 STAT2P52630 851 aa20.46■□□□□ 0.87
FAM3A-212ENST00000434658 FCGRTP55899 365 aa20.46■□□□□ 0.87
FAM3A-212ENST00000434658 OTOP1Q7RTM1 612 aa20.46■□□□□ 0.87
FAM3A-212ENST00000434658 GPBP1Q86WP2 473 aa20.46■□□□□ 0.87
FAM3A-212ENST00000434658 ADAMTS5Q9UNA0 930 aa20.46■□□□□ 0.87
FAM3A-212ENST00000434658 COL4A3BPQ9Y5P4 624 aa20.46■□□□□ 0.87
FAM3A-212ENST00000434658 EPHB6O15197 1021 aa20.46■□□□□ 0.87
FAM3A-212ENST00000434658 MED24O75448 989 aa20.46■□□□□ 0.87
FAM3A-212ENST00000434658 PRPF38AQ8NAV1 312 aaKnown RBP20.46■□□□□ 0.87
FAM3A-212ENST00000434658 STK24Q9Y6E0 443 aa20.46■□□□□ 0.87
FAM3A-212ENST00000434658 PARP14Q460N5 1801 aa20.45■□□□□ 0.86
FAM3A-212ENST00000434658 RCCD1A6NED2 376 aa20.45■□□□□ 0.86
FAM3A-212ENST00000434658 KIF20AO95235 890 aa20.45■□□□□ 0.86
FAM3A-212ENST00000434658 VAV2P52735 878 aa20.45■□□□□ 0.86
FAM3A-212ENST00000434658 SLC12A3P55017 1021 aa20.45■□□□□ 0.86
FAM3A-212ENST00000434658 PAPD7Q5XG87 772 aaKnown RBP20.45■□□□□ 0.86
FAM3A-212ENST00000434658 CHURC1Q8WUH1 139 aa20.45■□□□□ 0.86
FAM3A-212ENST00000434658 HNRNPLLQ8WVV9 542 aaKnown RBP20.45■□□□□ 0.86
FAM3A-212ENST00000434658 LENG9Q96B70 501 aa20.45■□□□□ 0.86
FAM3A-212ENST00000434658 CCDC42Q96M95 316 aa20.45■□□□□ 0.86
FAM3A-212ENST00000434658 TSGA10Q9BZW7 698 aa20.45■□□□□ 0.86
FAM3A-212ENST00000434658 FAM207AQ9NSI2 230 aaPredicted RBP20.45■□□□□ 0.86
FAM3A-212ENST00000434658 VWA5AO00534 786 aa20.44■□□□□ 0.86
FAM3A-212ENST00000434658 LCA5LO95447 670 aa20.44■□□□□ 0.86
FAM3A-212ENST00000434658 GNA14O95837 355 aa20.44■□□□□ 0.86
FAM3A-212ENST00000434658 CIITAP33076 1130 aa20.44■□□□□ 0.86
FAM3A-212ENST00000434658 STAT3P40763 770 aa20.44■□□□□ 0.86
FAM3A-212ENST00000434658 MARSP56192 900 aaKnown RBP20.44■□□□□ 0.86
FAM3A-212ENST00000434658 PRR16Q569H4 304 aa20.44■□□□□ 0.86
FAM3A-212ENST00000434658 FAM160B2Q86V87 743 aa20.44■□□□□ 0.86
FAM3A-212ENST00000434658 TEX2Q8IWB9 1127 aa20.44■□□□□ 0.86
FAM3A-212ENST00000434658 ZC3H3Q8IXZ2 948 aaKnown RBP20.44■□□□□ 0.86
FAM3A-212ENST00000434658 ERMNQ8TAM6 284 aa20.44■□□□□ 0.86
FAM3A-212ENST00000434658 FAM20AQ96MK3 541 aa20.44■□□□□ 0.86
FAM3A-212ENST00000434658 LACRTQ9GZZ8 138 aa20.44■□□□□ 0.86
FAM3A-212ENST00000434658 MMRN2Q9H8L6 949 aa20.44■□□□□ 0.86
FAM3A-212ENST00000434658 ARHGAP20Q9P2F6 1191 aa20.44■□□□□ 0.86
FAM3A-212ENST00000434658 TFR2Q9UP52 801 aa20.44■□□□□ 0.86
FAM3A-212ENST00000434658 ZSWIM8A7E2V4 1837 aa20.44■□□□□ 0.86
FAM3A-212ENST00000434658 ANO9A1A5B4 782 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 SPDYE3A6NKU9 549 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 TNPO2O14787 897 aaKnown RBP20.43■□□□□ 0.86
FAM3A-212ENST00000434658 GNRH1P01148 92 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 TFRCP02786 760 aaKnown RBP20.43■□□□□ 0.86
FAM3A-212ENST00000434658 SNAP25P60880 206 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 PLS1Q14651 629 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 SPA17Q15506 151 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 BAP1Q92560 729 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 FGFBP2Q9BYJ0 223 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 UBXN6Q9BZV1 441 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 OPLAHO14841 1288 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 ZNF263O14978 683 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 SASH3O75995 380 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 TUBBP07437 444 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 RPA1P27694 616 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 HOXD10P28358 340 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 CCNA1P78396 465 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 TMEM132BQ14DG7 1078 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 PKN2Q16513 984 aaKnown RBP20.43■□□□□ 0.86
FAM3A-212ENST00000434658 USH1GQ495M9 461 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 ARSHQ5FYA8 562 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 HERC4Q5GLZ8 1057 aaPredicted RBP20.43■□□□□ 0.86
FAM3A-212ENST00000434658 SCFD1Q8WVM8 642 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 MCOLN1Q9GZU1 580 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 PORCNQ9H237 461 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 KCTD10Q9H3F6 313 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 PRR12Q9ULL5 1215 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 SAR1BQ9Y6B6 198 aa20.43■□□□□ 0.86
FAM3A-212ENST00000434658 NPHP3-ACAD11A0A0J9YXS1 232 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 POTEFA5A3E0 1075 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 PIK3CDO00329 1044 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 PLA2G6O60733 806 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 ATP1A1P05023 1023 aaKnown RBP20.42■□□□□ 0.86
FAM3A-212ENST00000434658 CYP3A4P08684 503 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 FAM193AP78312 1265 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 CYP27A1Q02318 531 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 KIF5AQ12840 1032 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 TERF2Q15554 542 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 CCDC40Q4G0X9 1142 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 PDXDC1Q6P996 788 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 POTEGQ6S5H5 508 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 PPP4R3CPQ6ZMV5 832 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 CATSPER3Q86XQ3 398 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 NEK11Q8NG66 645 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 UIMC1Q96RL1 719 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 PNKPQ96T60 521 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 FUT8Q9BYC5 575 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 SPATC1LQ9H0A9 340 aa20.42■□□□□ 0.86
FAM3A-212ENST00000434658 LRRC53A6NM62 1247 aa20.41■□□□□ 0.86
FAM3A-212ENST00000434658 FAM86B1E9PN63 330 aa20.41■□□□□ 0.86
FAM3A-212ENST00000434658 ZBED4O75132 1171 aa20.41■□□□□ 0.86
FAM3A-212ENST00000434658 PLEKP08567 350 aaPredicted RBP20.41■□□□□ 0.86
FAM3A-212ENST00000434658 FAM86B2P0C5J1 330 aa20.41■□□□□ 0.86
FAM3A-212ENST00000434658 MAPK4P31152 587 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms