RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 LRRC27Q9C0I9 530 aa17.04■□□□□ 0.32
SCARF1-203ENST00000434376 COL20A1Q9P218 1284 aa17.04■□□□□ 0.32
SCARF1-203ENST00000434376 AJAP1Q9UKB5 411 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-203ENST00000434376 TELO2Q9Y4R8 837 aa17.04■□□□□ 0.32
SCARF1-203ENST00000434376 hCG_1984214I3L0E3 225 aa17.04■□□□□ 0.32
SCARF1-203ENST00000434376 SMARCA1P28370 1054 aa17.04■□□□□ 0.32
SCARF1-203ENST00000434376 COPB2P35606 906 aa17.04■□□□□ 0.32
SCARF1-203ENST00000434376 CCT5P48643 541 aa17.04■□□□□ 0.32
SCARF1-203ENST00000434376 LMBRD2Q68DH5 695 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-203ENST00000434376 PDXDC1Q6P996 788 aa17.04■□□□□ 0.32
SCARF1-203ENST00000434376 ZNF713Q8N859 430 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-203ENST00000434376 ALS2CR12Q96Q35 445 aa17.04■□□□□ 0.32
SCARF1-203ENST00000434376 KCNK3O14649 394 aa17.03■□□□□ 0.32
SCARF1-203ENST00000434376 SLITRK3O94933 977 aa17.03■□□□□ 0.32
SCARF1-203ENST00000434376 PTK2Q05397 1052 aa17.03■□□□□ 0.32
SCARF1-203ENST00000434376 TRADDQ15628 312 aa17.03■□□□□ 0.32
SCARF1-203ENST00000434376 CEP55Q53EZ4 464 aa17.03■□□□□ 0.32
SCARF1-203ENST00000434376 PAXIP1Q6ZW49 1069 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-203ENST00000434376 CHURC1Q8WUH1 139 aa17.03■□□□□ 0.32
SCARF1-203ENST00000434376 EPB41P11171 864 aaKnown RBP17.03■□□□□ 0.32
SCARF1-203ENST00000434376 RPA1P27694 616 aa17.03■□□□□ 0.32
SCARF1-203ENST00000434376 FAM102BQ5T8I3 360 aa17.03■□□□□ 0.32
SCARF1-203ENST00000434376 DHX37Q8IY37 1157 aaKnown RBP17.03■□□□□ 0.32
SCARF1-203ENST00000434376 TAAR1Q96RJ0 339 aa17.03■□□□□ 0.32
SCARF1-203ENST00000434376 EHD4Q9H223 541 aa17.03■□□□□ 0.32
SCARF1-203ENST00000434376 SCN9AQ15858 1988 aa17.03■□□□□ 0.32
SCARF1-203ENST00000434376 HLTFQ14527 1009 aaKnown RBP eCLIP17.03■□□□□ 0.32
SCARF1-203ENST00000434376 SAAL1Q96ER3 474 aa17.03■□□□□ 0.32
SCARF1-203ENST00000434376 SLX4Q8IY92 1834 aa17.02■□□□□ 0.32
SCARF1-203ENST00000434376 GCLMP48507 274 aa17.02■□□□□ 0.32
SCARF1-203ENST00000434376 ICE2Q659A1 982 aa17.02■□□□□ 0.32
SCARF1-203ENST00000434376 STYK1Q6J9G0 422 aa17.02■□□□□ 0.32
SCARF1-203ENST00000434376 FAM186BQ8IYM0 893 aa17.02■□□□□ 0.32
SCARF1-203ENST00000434376 FAM71BQ8TC56 605 aa17.02■□□□□ 0.32
SCARF1-203ENST00000434376 BAP1Q92560 729 aa17.02■□□□□ 0.32
SCARF1-203ENST00000434376 CEP104O60308 925 aa17.02■□□□□ 0.31
SCARF1-203ENST00000434376 NOL4O94818 638 aa17.02■□□□□ 0.31
SCARF1-203ENST00000434376 SREBF1P36956 1147 aa17.02■□□□□ 0.31
SCARF1-203ENST00000434376 PAFAH1B1P43034 410 aa17.02■□□□□ 0.31
SCARF1-203ENST00000434376 SPIRE1Q08AE8 756 aa17.02■□□□□ 0.31
SCARF1-203ENST00000434376 KCTD16Q68DU8 428 aa17.02■□□□□ 0.31
SCARF1-203ENST00000434376 HS2ST1Q7LGA3 356 aa17.02■□□□□ 0.31
SCARF1-203ENST00000434376 GLYCTKQ8IVS8 523 aa17.02■□□□□ 0.31
SCARF1-203ENST00000434376 VCPKMTQ9H867 229 aa17.02■□□□□ 0.31
SCARF1-203ENST00000434376 MYH7BA7E2Y1 1941 aa17.02■□□□□ 0.31
SCARF1-203ENST00000434376 SLC16A4O15374 487 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 HOXD13P35453 343 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 HMGCS2P54868 508 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 PEX3P56589 373 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 WHAMMP3Q1A5X7 153 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 C2CD6Q53TS8 623 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 KCNH7Q9NS40 1196 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 ITGB5P18084 799 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 AP3B2Q13367 1082 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 FAM151AQ8WW52 585 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 MKL1Q969V6 931 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 NOX5Q96PH1 765 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 KRT12Q99456 494 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 POP1Q99575 1024 aaKnown RBP17.01■□□□□ 0.31
SCARF1-203ENST00000434376 ATP9AO75110 1047 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 HIP1RO75146 1068 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 MAGEA9P43362 315 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 TRAPPC11Q7Z392 1133 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 ATG4CQ96DT6 458 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 EFCC1Q9HA90 598 aa17.01■□□□□ 0.31
SCARF1-203ENST00000434376 LOC102724159A0A0B4J2E5 919 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 H0YHG0 523 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 AFPP02771 609 aaKnown RBP17■□□□□ 0.31
SCARF1-203ENST00000434376 DLATP10515 647 aaKnown RBP17■□□□□ 0.31
SCARF1-203ENST00000434376 UCHL3P15374 230 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 GGCXP38435 758 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 CAP2P40123 477 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 MNAT1P51948 309 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 PWP2Q15269 919 aaKnown RBP17■□□□□ 0.31
SCARF1-203ENST00000434376 XKR9Q5GH70 373 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 CIAPIN1Q6FI81 312 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 OTOP1Q7RTM1 612 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 MICALL2Q8IY33 904 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 SYT2Q8N9I0 419 aaPredicted RBP17■□□□□ 0.31
SCARF1-203ENST00000434376 OSBPL9Q96SU4 736 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 FAM107BQ9H098 131 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 PARVGQ9HBI0 331 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 RBM12Q9NTZ6 932 aaKnown RBP17■□□□□ 0.31
SCARF1-203ENST00000434376 TMX2Q9Y320 296 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 FOSP01100 380 aaPredicted RBP17■□□□□ 0.31
SCARF1-203ENST00000434376 CDR1P51861 262 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 RPS6P62753 249 aaKnown RBP17■□□□□ 0.31
SCARF1-203ENST00000434376 DLG4P78352 724 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 AMPD2Q01433 879 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 EPC2Q52LR7 807 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 CYFIP1Q7L576 1253 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 TRIM59Q8IWR1 403 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 C7orf43Q8WVR3 580 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 KCTD10Q9H3F6 313 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 SH2D4AQ9H788 454 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 MYOZ2Q9NPC6 264 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 MYO1AQ9UBC5 1043 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 RIPK3Q9Y572 518 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 ZHX2Q9Y6X8 837 aa17■□□□□ 0.31
SCARF1-203ENST00000434376 SBF2Q86WG5 1849 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms