RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 TRAPPC12Q8WVT3 735 aa16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 BRF1Q92994 677 aa16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 FAM122AQ96E09 287 aa16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 FAM167AQ96KS9 214 aa16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 POP1Q99575 1024 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 AAASQ9NRG9 546 aa16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 PCDHB7Q9Y5E2 793 aa16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 IGLV3-22A0A075B6J6 115 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 FSD2A1L4K1 749 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 DENND3A2RUS2 1198 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 GRM6O15303 877 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 LINC00271P0C7V0 271 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 IL9P15248 144 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 PLA2G5P39877 138 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 SARSP49591 514 aaKnown RBP16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 SWSAP1Q6NVH7 229 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 CCDC60Q8IWA6 550 aaPredicted RBP16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 CRYGNQ8WXF5 182 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 LINC01599Q8WXQ3 324 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 ZBTB10Q96DT7 871 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 LRFN3Q9BTN0 628 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 RNF26Q9BY78 433 aaPredicted RBP16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 C22orf23Q9BZE7 217 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 UPF3BQ9BZI7 483 aaKnown RBP16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 GINS2Q9Y248 185 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 PCDHA10Q9Y5I2 948 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 GTF3C3Q9Y5Q9 886 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 CYP46A1Q9Y6A2 500 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 RALGAPA2Q2PPJ7 1873 aa16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 TCF20Q9UGU0 1960 aaKnown RBP16.86■□□□□ 0.29
RPUSD3-208ENST00000433972 MAGEB2O15479 319 aa16.85■□□□□ 0.29
RPUSD3-208ENST00000433972 TMOD1P28289 359 aa16.85■□□□□ 0.29
RPUSD3-208ENST00000433972 CRYBB1P53674 252 aaPredicted RBP16.85■□□□□ 0.29
RPUSD3-208ENST00000433972 ANAPC15P60006 121 aa16.85■□□□□ 0.29
RPUSD3-208ENST00000433972 CSPP1Q1MSJ5 1256 aa16.85■□□□□ 0.29
RPUSD3-208ENST00000433972 CTC1Q2NKJ3 1217 aa16.85■□□□□ 0.29
RPUSD3-208ENST00000433972 CRIPAKQ8N1N5 446 aa16.85■□□□□ 0.29
RPUSD3-208ENST00000433972 TM6SF1Q9BZW5 370 aa16.85■□□□□ 0.29
RPUSD3-208ENST00000433972 PLAGL2Q9UPG8 496 aa16.85■□□□□ 0.29
RPUSD3-208ENST00000433972 SAMM50Q9Y512 469 aa16.85■□□□□ 0.29
RPUSD3-208ENST00000433972 MAFBQ9Y5Q3 323 aaPredicted RBP16.85■□□□□ 0.29
RPUSD3-208ENST00000433972 MRPL42Q9Y6G3 142 aaKnown RBP16.85■□□□□ 0.29
RPUSD3-208ENST00000433972 KAT6AQ92794 2004 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 WDR64B1ANS9 1081 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 DHX15O43143 795 aaKnown RBP16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 RPS6KB1P23443 525 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 CIITAP33076 1130 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 UBE3AQ05086 875 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 PRR16Q569H4 304 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 SLC24A5Q71RS6 500 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 RUFY3Q7L099 469 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 RTN4RL1Q86UN2 441 aaPredicted RBP16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 ADHFE1Q8IWW8 467 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 TRIM22Q8IYM9 498 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 KIAA0319LQ8IZA0 1049 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 MAP7D2Q96T17 732 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 AGXT2Q9BYV1 514 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 ERVK-5Q9HDB9 667 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 RGS18Q9NS28 235 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 PCDHB12Q9Y5F1 795 aa16.84■□□□□ 0.29
RPUSD3-208ENST00000433972 PRR33A8MZF0 331 aa16.83■□□□□ 0.28
RPUSD3-208ENST00000433972 IFNAR1P17181 557 aa16.83■□□□□ 0.28
RPUSD3-208ENST00000433972 HYAL1Q12794 435 aa16.83■□□□□ 0.28
RPUSD3-208ENST00000433972 TMEM266Q2M3C6 531 aa16.83■□□□□ 0.28
RPUSD3-208ENST00000433972 PAN2Q504Q3 1202 aaKnown RBP16.83■□□□□ 0.28
RPUSD3-208ENST00000433972 SPOUT1Q5T280 376 aaKnown RBP16.83■□□□□ 0.28
RPUSD3-208ENST00000433972 METTL13Q8N6R0 699 aa16.83■□□□□ 0.28
RPUSD3-208ENST00000433972 ZSWIM6Q9HCJ5 1215 aa16.83■□□□□ 0.28
RPUSD3-208ENST00000433972 ALG13Q9NP73 1137 aaKnown RBP16.83■□□□□ 0.28
RPUSD3-208ENST00000433972 CD320Q9NPF0 282 aa16.83■□□□□ 0.28
RPUSD3-208ENST00000433972 SH3GLB2Q9NR46 395 aa16.83■□□□□ 0.28
RPUSD3-208ENST00000433972 ST3GAL5Q9UNP4 418 aa16.83■□□□□ 0.28
RPUSD3-208ENST00000433972 HOXA2O43364 376 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 DCXO43602 365 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 C22orf31O95567 290 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 SFNP31947 248 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 NDUFV1P49821 464 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 USP11P51784 963 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 ZP2Q05996 745 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 SMAD4Q13485 552 aaKnown RBP16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 SMAD2Q15796 467 aaKnown RBP16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 PKN1Q16512 942 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 FAM177A1Q8N128 213 aaPredicted RBP16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 KLHL23Q8NBE8 558 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 PHKBQ93100 1093 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 RIT2Q99578 217 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 ADAM2Q99965 735 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 SLC26A6Q9BXS9 759 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 TMX1Q9H3N1 280 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 ELAC1Q9H777 363 aaKnown RBP16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 UPF2Q9HAU5 1272 aaKnown RBP16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 ATP6V0A4Q9HBG4 840 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 NRBP2Q9NSY0 501 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 GABBR1Q9UBS5 961 aa16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 NOC2LQ9Y3T9 749 aaKnown RBP16.82■□□□□ 0.28
RPUSD3-208ENST00000433972 RBAK-RBAKDNI3L0D1 243 aa16.81■□□□□ 0.28
RPUSD3-208ENST00000433972 ITGB1P05556 798 aa16.81■□□□□ 0.28
RPUSD3-208ENST00000433972 CPA1P15085 419 aa16.81■□□□□ 0.28
RPUSD3-208ENST00000433972 JAK3P52333 1124 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms