RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 PHOSPHO1Q8TCT1 267 aa7.8□□□□□ -1.16
HDAC9-213ENST00000433709 YIPF4Q9BSR8 244 aa7.8□□□□□ -1.16
HDAC9-213ENST00000433709 TNPO3Q9Y5L0 923 aaKnown RBP7.8□□□□□ -1.16
HDAC9-213ENST00000433709 NRXN3Q9Y4C0 1643 aa7.8□□□□□ -1.16
HDAC9-213ENST00000433709 NPHP3Q7Z494 1330 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 MST1RQ04912 1400 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 SPATA31E1Q6ZUB1 1445 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 AMY2AP04746 511 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 AMY2BP19961 511 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 JAM2P57087 298 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 ZNF460Q14592 562 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 GPR19Q15760 415 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 CRY1Q16526 586 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 FAM47CQ5HY64 1035 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 CNKSR3Q6P9H4 555 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 PTRH1Q86Y79 214 aaKnown RBP7.79□□□□□ -1.16
HDAC9-213ENST00000433709 TRIM48Q8IWZ4 208 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 CISD2Q8N5K1 135 aaKnown RBP7.79□□□□□ -1.16
HDAC9-213ENST00000433709 IGSF22Q8N9C0 903 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 DDX11Q96FC9 970 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 KRTAP9-2Q9BYQ4 174 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 IRF2BPLQ9H1B7 796 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 C14orf93Q9H972 538 aaKnown RBP7.79□□□□□ -1.16
HDAC9-213ENST00000433709 GOLGA2P5Q9HBQ8 144 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 TMA7Q9Y2S6 64 aaKnown RBP7.79□□□□□ -1.16
HDAC9-213ENST00000433709 RAB3GAP2Q9H2M9 1393 aa7.79□□□□□ -1.16
HDAC9-213ENST00000433709 ENPP3O14638 875 aa7.78□□□□□ -1.16
HDAC9-213ENST00000433709 KCNK3O14649 394 aa7.78□□□□□ -1.16
HDAC9-213ENST00000433709 GSTA4O15217 222 aa7.78□□□□□ -1.16
HDAC9-213ENST00000433709 OPA1O60313 960 aa7.78□□□□□ -1.16
HDAC9-213ENST00000433709 APPP05067 770 aa7.78□□□□□ -1.16
HDAC9-213ENST00000433709 CR1LQ2VPA4 569 aa7.78□□□□□ -1.16
HDAC9-213ENST00000433709 TOE1Q96GM8 510 aaKnown RBP7.78□□□□□ -1.16
HDAC9-213ENST00000433709 PWWP2AQ96N64 755 aa7.78□□□□□ -1.16
HDAC9-213ENST00000433709 NOX5Q96PH1 765 aa7.78□□□□□ -1.16
HDAC9-213ENST00000433709 DTLQ9NZJ0 730 aa7.78□□□□□ -1.16
HDAC9-213ENST00000433709 PPLO60437 1756 aa7.78□□□□□ -1.16
HDAC9-213ENST00000433709 ASXL1Q8IXJ9 1541 aa7.78□□□□□ -1.16
HDAC9-213ENST00000433709 TECPR2O15040 1411 aa7.78□□□□□ -1.16
HDAC9-213ENST00000433709 MYOM2P54296 1465 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 C1orf167Q5SNV9 1468 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 EIF3AQ14152 1382 aaKnown RBP7.77□□□□□ -1.17
HDAC9-213ENST00000433709 DBX1A6NMT0 343 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 ZNF561-AS1K7EIQ3 104 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 MAN2B1O00754 1011 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 NUAK1O60285 661 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 LRG1P02750 347 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 PLA2G1BP04054 148 aaKnown RBP7.77□□□□□ -1.17
HDAC9-213ENST00000433709 CYP2C8P10632 490 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 CFPP27918 469 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 LACTBP83111 547 aaPredicted RBP7.77□□□□□ -1.17
HDAC9-213ENST00000433709 ZNF385BQ569K4 471 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 SDE2Q6IQ49 451 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 KCTD1Q719H9 257 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.77□□□□□ -1.17
HDAC9-213ENST00000433709 KIAA0907Q7Z7F0 614 aaPredicted RBP7.77□□□□□ -1.17
HDAC9-213ENST00000433709 STK32CQ86UX6 486 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 KRTAP19-1Q8IUB9 90 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 DHX37Q8IY37 1157 aaKnown RBP7.77□□□□□ -1.17
HDAC9-213ENST00000433709 CELF4Q9BZC1 486 aaKnown RBP7.77□□□□□ -1.17
HDAC9-213ENST00000433709 SMURF1Q9HCE7 757 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 SRPK3Q9UPE1 567 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 COL16A1Q07092 1604 aaPredicted RBP7.77□□□□□ -1.17
HDAC9-213ENST00000433709 PIK3C2GO75747 1445 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 ADGRF5Q8IZF2 1346 aa7.77□□□□□ -1.17
HDAC9-213ENST00000433709 RFXAPO00287 272 aa7.76□□□□□ -1.17
HDAC9-213ENST00000433709 ASLP04424 464 aa7.76□□□□□ -1.17
HDAC9-213ENST00000433709 IGFALSP35858 605 aa7.76□□□□□ -1.17
HDAC9-213ENST00000433709 EPHA5P54756 1037 aa7.76□□□□□ -1.17
HDAC9-213ENST00000433709 TEPPQ6URK8 271 aa7.76□□□□□ -1.17
HDAC9-213ENST00000433709 OVCH1Q7RTY7 1134 aa7.76□□□□□ -1.17
HDAC9-213ENST00000433709 ZC3H18Q86VM9 953 aaKnown RBP7.76□□□□□ -1.17
HDAC9-213ENST00000433709 LRRC56Q8IYG6 542 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-213ENST00000433709 NINJ1Q92982 152 aa7.76□□□□□ -1.17
HDAC9-213ENST00000433709 DACT3Q96B18 629 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-213ENST00000433709 FEZ1Q99689 392 aa7.76□□□□□ -1.17
HDAC9-213ENST00000433709 GORASP1Q9BQQ3 440 aa7.76□□□□□ -1.17
HDAC9-213ENST00000433709 SAMD15Q9P1V8 674 aa7.76□□□□□ -1.17
HDAC9-213ENST00000433709 POGKQ9P215 609 aa7.76□□□□□ -1.17
HDAC9-213ENST00000433709 STK26Q9P289 416 aa7.76□□□□□ -1.17
HDAC9-213ENST00000433709 NUB1Q9Y5A7 615 aa7.76□□□□□ -1.17
HDAC9-213ENST00000433709 LAMC1P11047 1609 aa7.76□□□□□ -1.17
HDAC9-213ENST00000433709 SHPRHQ149N8 1683 aa7.76□□□□□ -1.17
HDAC9-213ENST00000433709 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.75□□□□□ -1.17
HDAC9-213ENST00000433709 NKX3-2P78367 333 aa7.75□□□□□ -1.17
HDAC9-213ENST00000433709 TMEM177Q53S58 311 aa7.75□□□□□ -1.17
HDAC9-213ENST00000433709 DALRD3Q5D0E6 543 aaKnown RBP7.75□□□□□ -1.17
HDAC9-213ENST00000433709 CIAPIN1Q6FI81 312 aa7.75□□□□□ -1.17
HDAC9-213ENST00000433709 ZCCHC8Q6NZY4 707 aaKnown RBP7.75□□□□□ -1.17
HDAC9-213ENST00000433709 FNIP1Q8TF40 1166 aa7.75□□□□□ -1.17
HDAC9-213ENST00000433709 TOX2Q96NM4 488 aa7.75□□□□□ -1.17
HDAC9-213ENST00000433709 KRTAP4-12Q9BQ66 201 aa7.75□□□□□ -1.17
HDAC9-213ENST00000433709 MAGEC2Q9UBF1 373 aaPredicted RBP7.75□□□□□ -1.17
HDAC9-213ENST00000433709 RBPJLQ9UBG7 517 aa7.75□□□□□ -1.17
HDAC9-213ENST00000433709 WASF3Q9UPY6 502 aa7.75□□□□□ -1.17
HDAC9-213ENST00000433709 PMF1-BGLAPU3KQ54 211 aa7.75□□□□□ -1.17
HDAC9-213ENST00000433709 YTHDC2Q9H6S0 1430 aaKnown RBP7.75□□□□□ -1.17
HDAC9-213ENST00000433709 CDC42BPGQ6DT37 1551 aa7.75□□□□□ -1.17
HDAC9-213ENST00000433709 FAM90A27PA6NNH2 459 aa7.74□□□□□ -1.17
HDAC9-213ENST00000433709 ACOT7O00154 380 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms