RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 ERICH6BQ5W0A0 696 aa4.88□□□□□ -1.63
LINC01239-201ENST00000433645 RNF180Q86T96 592 aa4.88□□□□□ -1.63
LINC01239-201ENST00000433645 THNSL2Q86YJ6 484 aa4.88□□□□□ -1.63
LINC01239-201ENST00000433645 SYT8Q8NBV8 401 aa4.88□□□□□ -1.63
LINC01239-201ENST00000433645 SMC1BQ8NDV3 1235 aa4.88□□□□□ -1.63
LINC01239-201ENST00000433645 OR2W6PQ8NHA6 318 aa4.88□□□□□ -1.63
LINC01239-201ENST00000433645 WDR48Q8TAF3 677 aa4.88□□□□□ -1.63
LINC01239-201ENST00000433645 CXorf38Q8TB03 319 aa4.88□□□□□ -1.63
LINC01239-201ENST00000433645 TACO1Q9BSH4 297 aaKnown RBP4.88□□□□□ -1.63
LINC01239-201ENST00000433645 MSL2Q9HCI7 577 aa4.88□□□□□ -1.63
LINC01239-201ENST00000433645 USP36Q9P275 1121 aaKnown RBP4.88□□□□□ -1.63
LINC01239-201ENST00000433645 A0A0G2JLL6 359 aaPredicted RBP4.87□□□□□ -1.63
LINC01239-201ENST00000433645 PRAMEF22A3QJZ6 481 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 APEX1P27695 318 aaKnown RBP4.87□□□□□ -1.63
LINC01239-201ENST00000433645 MC4RP32245 332 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 STAT3P40763 770 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 ETV4P43268 484 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 LSSP48449 732 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 ROM1Q03395 351 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 MAP3K12Q12852 859 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 TOP3AQ13472 1001 aaPredicted RBP4.87□□□□□ -1.63
LINC01239-201ENST00000433645 SART3Q15020 963 aaKnown RBP4.87□□□□□ -1.63
LINC01239-201ENST00000433645 EIF4HQ15056 248 aaKnown RBP4.87□□□□□ -1.63
LINC01239-201ENST00000433645 PCBP1Q15365 356 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC01239-201ENST00000433645 ZNF827Q17R98 1081 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 TMEM200BQ69YZ2 307 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 NUDT10Q8NFP7 164 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 NUDT11Q96G61 164 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 MAML3Q96JK9 1138 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 C20orf173Q96LM9 149 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 ZDHHC5Q9C0B5 715 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 CAAP1Q9H8G2 361 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC01239-201ENST00000433645 UCKL1Q9NWZ5 548 aa4.87□□□□□ -1.63
LINC01239-201ENST00000433645 MAFGO15525 162 aa4.86□□□□□ -1.63
LINC01239-201ENST00000433645 ZEB2O60315 1214 aa4.86□□□□□ -1.63
LINC01239-201ENST00000433645 KRT37O76014 449 aa4.86□□□□□ -1.63
LINC01239-201ENST00000433645 PRLP01236 227 aa4.86□□□□□ -1.63
LINC01239-201ENST00000433645 SOX5P35711 763 aa4.86□□□□□ -1.63
LINC01239-201ENST00000433645 MASP1P48740 699 aa4.86□□□□□ -1.63
LINC01239-201ENST00000433645 KPNA1P52294 538 aaPredicted RBP4.86□□□□□ -1.63
LINC01239-201ENST00000433645 CTSWP56202 376 aa4.86□□□□□ -1.63
LINC01239-201ENST00000433645 SMAD3P84022 425 aaKnown RBP4.86□□□□□ -1.63
LINC01239-201ENST00000433645 NFIXQ14938 502 aa4.86□□□□□ -1.63
LINC01239-201ENST00000433645 SEPT7Q16181 437 aaKnown RBP4.86□□□□□ -1.63
LINC01239-201ENST00000433645 WDR72Q3MJ13 1102 aa4.86□□□□□ -1.63
LINC01239-201ENST00000433645 TTC38Q5R3I4 469 aa4.86□□□□□ -1.63
LINC01239-201ENST00000433645 DDX46Q7L014 1031 aaKnown RBP4.86□□□□□ -1.63
LINC01239-201ENST00000433645 KRT26Q7Z3Y9 468 aa4.86□□□□□ -1.63
LINC01239-201ENST00000433645 PHYKPLQ8IUZ5 450 aa4.86□□□□□ -1.63
LINC01239-201ENST00000433645 IFNL2Q8IZJ0 200 aa4.86□□□□□ -1.63
LINC01239-201ENST00000433645 ELF4Q99607 663 aaPredicted RBP4.86□□□□□ -1.63
LINC01239-201ENST00000433645 CARD11Q9BXL7 1154 aa4.86□□□□□ -1.63
LINC01239-201ENST00000433645 A0A0G2JNJ9 132 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 UBA6A0AVT1 1052 aaPredicted RBP4.85□□□□□ -1.63
LINC01239-201ENST00000433645 ZNF891A8MT65 544 aaPredicted RBP4.85□□□□□ -1.63
LINC01239-201ENST00000433645 B4GALT3O60512 393 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 BPIP17213 487 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 SLC9A1P19634 815 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 CD40P25942 277 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 CSF2RBP32927 897 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 EPHB4P54760 987 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 USP10Q14694 798 aaKnown RBP4.85□□□□□ -1.63
LINC01239-201ENST00000433645 TRIM68Q6AZZ1 485 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 TIGD7Q6NT04 549 aaPredicted RBP4.85□□□□□ -1.63
LINC01239-201ENST00000433645 C11orf74Q86VG3 221 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 KBTBD2Q8IY47 623 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 NXPE1Q8N323 547 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 CHAC2Q8WUX2 184 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 SEC61A2Q9H9S3 476 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 Q9UFV3 132 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 VWA7Q9Y334 891 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 SLC4A7Q9Y6M7 1214 aa4.85□□□□□ -1.63
LINC01239-201ENST00000433645 BRINP1O60477 761 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 FKBP9O95302 570 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 PLATP00750 562 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 CPEP16870 476 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 PTX3P26022 381 aaPredicted RBP4.84□□□□□ -1.63
LINC01239-201ENST00000433645 LSP1P33241 339 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 BCAR1P56945 870 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 SESN2P58004 480 aaPredicted RBP4.84□□□□□ -1.63
LINC01239-201ENST00000433645 CD83Q01151 205 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 ZMAT1Q5H9K5 638 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 UBXN11Q5T124 520 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 PHF19Q5T6S3 580 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 GRAMD4Q6IC98 578 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 ESRP1Q6NXG1 681 aaKnown RBP4.84□□□□□ -1.63
LINC01239-201ENST00000433645 LILRA6Q6PI73 481 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 LRSAM1Q6UWE0 723 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 FKBP9P1Q75LS8 142 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 KANSL1Q7Z3B3 1105 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 RALYLQ86SE5 291 aaKnown RBP4.84□□□□□ -1.63
LINC01239-201ENST00000433645 ZDHHC14Q8IZN3 488 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 ZNF610Q8N9Z0 462 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 CHTF18Q8WVB6 975 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 LPPQ93052 612 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 RELTQ969Z4 430 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 IFT22Q9H7X7 185 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 ZMAT4Q9H898 229 aa4.84□□□□□ -1.63
LINC01239-201ENST00000433645 TOMM22Q9NS69 142 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms