RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 RSAD2Q8WXG1 361 aa7.73□□□□□ -1.17
USP54-206ENST00000433394 CLIP3Q96DZ5 547 aa7.73□□□□□ -1.17
USP54-206ENST00000433394 ANO3Q9BYT9 981 aa7.73□□□□□ -1.17
USP54-206ENST00000433394 PRDM11Q9NQV5 511 aa7.73□□□□□ -1.17
USP54-206ENST00000433394 PRAMEF22A3QJZ6 481 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 GOLGA6L22H0YM25 854 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 TMEM253P0C7T8 217 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 HSPA6P17066 643 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 AOAHP28039 575 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 GPR3P46089 330 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.72□□□□□ -1.17
USP54-206ENST00000433394 SKIDA1Q1XH10 827 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 PRAMEF18Q5VWM3 479 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 VASNQ6EMK4 673 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 SLFN12LQ6IEE8 588 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 PPP4R4Q6NUP7 873 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 CCDC62Q6P9F0 684 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 SLC4A10Q6U841 1118 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 C14orf80Q86SX3 495 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 AMIGO3Q86WK7 504 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 Q8N3U1 123 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.72□□□□□ -1.17
USP54-206ENST00000433394 TTC8Q8TAM2 541 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 SHISA4Q96DD7 197 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 ZNF496Q96IT1 587 aaPredicted RBP7.72□□□□□ -1.17
USP54-206ENST00000433394 FOXB1Q99853 325 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 POFUT1Q9H488 388 aa7.72□□□□□ -1.17
USP54-206ENST00000433394 H2AFYO75367 372 aaKnown RBP7.71□□□□□ -1.18
USP54-206ENST00000433394 PRPF6O94906 941 aaKnown RBP7.71□□□□□ -1.18
USP54-206ENST00000433394 PTGS1P23219 599 aa7.71□□□□□ -1.18
USP54-206ENST00000433394 GNALP38405 381 aa7.71□□□□□ -1.18
USP54-206ENST00000433394 SLC6A3Q01959 620 aa7.71□□□□□ -1.18
USP54-206ENST00000433394 ADCY2Q08462 1091 aa7.71□□□□□ -1.18
USP54-206ENST00000433394 TCIRG1Q13488 830 aa7.71□□□□□ -1.18
USP54-206ENST00000433394 PDCD1Q15116 288 aa7.71□□□□□ -1.18
USP54-206ENST00000433394 IRF2BP1Q8IU81 584 aa7.71□□□□□ -1.18
USP54-206ENST00000433394 CILP2Q8IUL8 1156 aa7.71□□□□□ -1.18
USP54-206ENST00000433394 QRSL1Q9H0R6 528 aaKnown RBP7.71□□□□□ -1.18
USP54-206ENST00000433394 MS4A5Q9H3V2 200 aa7.71□□□□□ -1.18
USP54-206ENST00000433394 PCDH18Q9HCL0 1135 aa7.71□□□□□ -1.18
USP54-206ENST00000433394 GPR45Q9Y5Y3 372 aa7.71□□□□□ -1.18
USP54-206ENST00000433394 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.7□□□□□ -1.18
USP54-206ENST00000433394 ACOT7O00154 380 aa7.7□□□□□ -1.18
USP54-206ENST00000433394 ERC2O15083 957 aa7.7□□□□□ -1.18
USP54-206ENST00000433394 SLC16A1P53985 500 aa7.7□□□□□ -1.18
USP54-206ENST00000433394 MANFP55145 182 aaKnown RBP7.7□□□□□ -1.18
USP54-206ENST00000433394 BCAR1P56945 870 aa7.7□□□□□ -1.18
USP54-206ENST00000433394 MRPS9P82933 396 aaKnown RBP7.7□□□□□ -1.18
USP54-206ENST00000433394 OS9Q13438 667 aaPredicted RBP7.7□□□□□ -1.18
USP54-206ENST00000433394 SPIDRQ14159 915 aa7.7□□□□□ -1.18
USP54-206ENST00000433394 PLEKHN1Q494U1 663 aaPredicted RBP7.7□□□□□ -1.18
USP54-206ENST00000433394 CT83Q5H943 113 aa7.7□□□□□ -1.18
USP54-206ENST00000433394 TOR2AQ5JU69 321 aa7.7□□□□□ -1.18
USP54-206ENST00000433394 KIAA1841Q6NSI8 718 aa7.7□□□□□ -1.18
USP54-206ENST00000433394 CMIPQ8IY22 773 aa7.7□□□□□ -1.18
USP54-206ENST00000433394 AUTS2Q8WXX7 1259 aa7.7□□□□□ -1.18
USP54-206ENST00000433394 ORAI2Q96SN7 254 aa7.7□□□□□ -1.18
USP54-206ENST00000433394 MYL10Q9BUA6 226 aa7.7□□□□□ -1.18
USP54-206ENST00000433394 NMRK2Q9NPI5 230 aa7.7□□□□□ -1.18
USP54-206ENST00000433394 SAP30BPQ9UHR5 308 aaKnown RBP7.7□□□□□ -1.18
USP54-206ENST00000433394 SYNPO2Q9UMS6 1093 aa7.7□□□□□ -1.18
USP54-206ENST00000433394 RASSF10A6NK89 507 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 DTNBO60941 627 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 CLEC2LP0C7M8 214 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 SDHBP21912 280 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 XPAP23025 273 aaPredicted RBP7.69□□□□□ -1.18
USP54-206ENST00000433394 ALDH6A1Q02252 535 aaKnown RBP7.69□□□□□ -1.18
USP54-206ENST00000433394 LRP8Q14114 963 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 CD276Q5ZPR3 534 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 TEPPQ6URK8 271 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 CD300LDQ6UXZ3 194 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 ATG4DQ86TL0 474 aaPredicted RBP7.69□□□□□ -1.18
USP54-206ENST00000433394 MIB1Q86YT6 1006 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 CMTR2Q8IYT2 770 aaKnown RBP7.69□□□□□ -1.18
USP54-206ENST00000433394 EAF2Q96CJ1 260 aaPredicted RBP7.69□□□□□ -1.18
USP54-206ENST00000433394 TEKT5Q96M29 485 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 AIFM3Q96NN9 605 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 INCENPQ9NQS7 918 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 UCKL1Q9NWZ5 548 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 HSPBP1Q9NZL4 362 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 EDARQ9UNE0 448 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 NUMBLQ9Y6R0 609 aa7.69□□□□□ -1.18
USP54-206ENST00000433394 SCO2A0A1W2PP80 73 aa7.68□□□□□ -1.18
USP54-206ENST00000433394 HRKO00198 91 aa7.68□□□□□ -1.18
USP54-206ENST00000433394 OFD1O75665 1012 aa7.68□□□□□ -1.18
USP54-206ENST00000433394 EFEMP2O95967 443 aa7.68□□□□□ -1.18
USP54-206ENST00000433394 PRLP01236 227 aa7.68□□□□□ -1.18
USP54-206ENST00000433394 AGXTP21549 392 aa7.68□□□□□ -1.18
USP54-206ENST00000433394 AKAP5P24588 427 aa7.68□□□□□ -1.18
USP54-206ENST00000433394 SRSF2Q01130 221 aaKnown RBP7.68□□□□□ -1.18
USP54-206ENST00000433394 MAP3K12Q12852 859 aa7.68□□□□□ -1.18
USP54-206ENST00000433394 TARBP2Q15633 366 aaKnown RBP7.68□□□□□ -1.18
USP54-206ENST00000433394 KCNMB1Q16558 191 aa7.68□□□□□ -1.18
USP54-206ENST00000433394 ARHGAP29Q52LW3 1261 aa7.68□□□□□ -1.18
USP54-206ENST00000433394 IFIT1BQ5T764 474 aaKnown RBP7.68□□□□□ -1.18
USP54-206ENST00000433394 DPP8Q6V1X1 898 aaPredicted RBP7.68□□□□□ -1.18
USP54-206ENST00000433394 TMC6Q7Z403 805 aa7.68□□□□□ -1.18
USP54-206ENST00000433394 RTN4RL1Q86UN2 441 aaPredicted RBP7.68□□□□□ -1.18
USP54-206ENST00000433394 TPH2Q8IWU9 490 aa7.68□□□□□ -1.18
USP54-206ENST00000433394 IGDCC4Q8TDY8 1250 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms