RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 PIGOQ8TEQ8 1089 aa12.25□□□□□ -0.45
SEC16A-206ENST00000431893 PRDM5Q9NQX1 630 aaPredicted RBP12.25□□□□□ -0.45
SEC16A-206ENST00000431893 DDX28Q9NUL7 540 aaKnown RBP12.25□□□□□ -0.45
SEC16A-206ENST00000431893 KCNG1Q9UIX4 513 aa12.25□□□□□ -0.45
SEC16A-206ENST00000431893 LRFN2Q9ULH4 789 aa12.25□□□□□ -0.45
SEC16A-206ENST00000431893 APOBEC2Q9Y235 224 aaKnown RBP12.25□□□□□ -0.45
SEC16A-206ENST00000431893 RAD23BP54727 409 aa12.25□□□□□ -0.45
SEC16A-206ENST00000431893 CYTH1Q15438 398 aa12.25□□□□□ -0.45
SEC16A-206ENST00000431893 ACBD5Q5T8D3 534 aaPredicted RBP12.25□□□□□ -0.45
SEC16A-206ENST00000431893 MRPL47Q9HD33 250 aaKnown RBP12.25□□□□□ -0.45
SEC16A-206ENST00000431893 ABCC4O15439 1325 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 VCAM1P19320 739 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 ALDH1B1P30837 517 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 KIAA2013Q8IYS2 634 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 NGRNQ9NPE2 291 aaKnown RBP12.24□□□□□ -0.45
SEC16A-206ENST00000431893 PRAMEF22A3QJZ6 481 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 USP17L8P0C7I0 530 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 MAGEA9P43362 315 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 SKOR1P84550 965 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 LBRQ14739 615 aaKnown RBP12.24□□□□□ -0.45
SEC16A-206ENST00000431893 IMPG1Q17R60 797 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 SLC26A7Q8TE54 656 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 ZNF668Q96K58 619 aaPredicted RBP12.24□□□□□ -0.45
SEC16A-206ENST00000431893 TGS1Q96RS0 853 aaKnown RBP12.24□□□□□ -0.45
SEC16A-206ENST00000431893 PUS7LQ9H0K6 701 aaKnown RBP12.24□□□□□ -0.45
SEC16A-206ENST00000431893 THAP9Q9H5L6 903 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 ARHGAP26Q9UNA1 814 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 A0A1W2PQ27 194 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 A0A1W2PQ64 194 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 A0A1W2PQD8 194 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 SNX2O60749 519 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 SAAL1Q96ER3 474 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 TMEM60Q9H2L4 133 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 ZNF229Q9UJW7 825 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 ANAPC7Q9UJX3 599 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 KDM1AO60341 852 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 KCNQ4P56696 695 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 GALNT17Q6IS24 598 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 LINC00301Q8NCQ3 95 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 SLC7A3Q8WY07 619 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 BEGAINQ9BUH8 593 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 LMCD1Q9NZU5 365 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 YEATS2Q9ULM3 1422 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 IKBKBO14920 756 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 CCDC159P0C7I6 412 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 GAP43P17677 238 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 CCND2P30279 289 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 KDELC2Q7Z4H8 507 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 NEUROG2Q9H2A3 272 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 NDST4Q9H3R1 872 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 DBNDD1Q9H9R9 158 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 STX18Q9P2W9 335 aaKnown RBP12.24□□□□□ -0.45
SEC16A-206ENST00000431893 SNX5Q9Y5X3 404 aa12.24□□□□□ -0.45
SEC16A-206ENST00000431893 KPNA2P52292 529 aaKnown RBP12.23□□□□□ -0.45
SEC16A-206ENST00000431893 LRRC8EQ6NSJ5 796 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 NBPF10Q6P3W6 841 aaKnown RBP12.23□□□□□ -0.45
SEC16A-206ENST00000431893 ARHGAP27Q6ZUM4 889 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 B4GALNT2Q8NHY0 566 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 SSH3Q8TE77 659 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 SLC12A6Q9UHW9 1150 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 DBNLQ9UJU6 430 aaKnown RBP12.23□□□□□ -0.45
SEC16A-206ENST00000431893 PIK3R2O00459 728 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 HNRNPCP07910 306 aaKnown RBP eCLIP12.23□□□□□ -0.452e-6■■■□□ 16.1
SEC16A-206ENST00000431893 ERICH1Q86X53 443 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 PARP9Q8IXQ6 854 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 ZBTB38Q8NAP3 1195 aaPredicted RBP12.23□□□□□ -0.45
SEC16A-206ENST00000431893 OR6B3Q8NGW1 331 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.23□□□□□ -0.45
SEC16A-206ENST00000431893 MMTAG2Q9BU76 263 aaKnown RBP12.23□□□□□ -0.45
SEC16A-206ENST00000431893 SEC31BQ9NQW1 1179 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 SLC5A4Q9NY91 659 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 POLIQ9UNA4 740 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 GPATCH8Q9UKJ3 1502 aaKnown RBP12.23□□□□□ -0.45
SEC16A-206ENST00000431893 RNF103-CHMP3A0A140T963 221 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 PRR29P0C7W0 189 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 TAC1P20366 129 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 RWDD2BP57060 319 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 TERF2Q15554 542 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 TAF1BQ53T94 588 aaPredicted RBP12.23□□□□□ -0.45
SEC16A-206ENST00000431893 FAM180AQ6UWF9 173 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 RNF25Q96BH1 459 aaPredicted RBP12.23□□□□□ -0.45
SEC16A-206ENST00000431893 MSTO1Q9BUK6 570 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 AMNQ9BXJ7 453 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 KLC2Q9H0B6 622 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 POLR3EQ9NVU0 708 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 PJA2O43164 708 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 MFAP3LO75121 409 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 PLEKHA8P1O95397 391 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 MXI1P50539 228 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
SEC16A-206ENST00000431893 MXD4Q14582 209 aaPredicted RBP12.23□□□□□ -0.45
SEC16A-206ENST00000431893 NAF1Q96HR8 494 aaKnown RBP12.23□□□□□ -0.45
SEC16A-206ENST00000431893 ZBTB18Q99592 522 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 HMGXB3Q12766 1538 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 E2F8A0AVK6 867 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 HSPA8P11142 646 aaKnown RBP12.23□□□□□ -0.45
SEC16A-206ENST00000431893 PMS2P54278 862 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 ALDH18A1P54886 795 aaKnown RBP12.23□□□□□ -0.45
SEC16A-206ENST00000431893 PEX3P56589 373 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 PIK3R5Q8WYR1 880 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms