RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 C22orf31O95567 290 aa16.1■□□□□ 0.17
CSTF3-202ENST00000431742 CYP2C9P11712 490 aa16.1■□□□□ 0.17
CSTF3-202ENST00000431742 CDC25AP30304 524 aa16.1■□□□□ 0.17
CSTF3-202ENST00000431742 YWHABP31946 246 aaKnown RBP16.1■□□□□ 0.17
CSTF3-202ENST00000431742 CCT6AP40227 531 aaKnown RBP16.1■□□□□ 0.17
CSTF3-202ENST00000431742 IGBP1P78318 339 aa16.1■□□□□ 0.17
CSTF3-202ENST00000431742 KRT85P78386 507 aa16.1■□□□□ 0.17
CSTF3-202ENST00000431742 ECM1Q16610 540 aa16.1■□□□□ 0.17
CSTF3-202ENST00000431742 HYIQ5T013 277 aa16.1■□□□□ 0.17
CSTF3-202ENST00000431742 KRT79Q5XKE5 535 aa16.1■□□□□ 0.17
CSTF3-202ENST00000431742 PLA2G4FQ68DD2 849 aa16.1■□□□□ 0.17
CSTF3-202ENST00000431742 POTEGQ6S5H5 508 aa16.1■□□□□ 0.17
CSTF3-202ENST00000431742 KRI1Q8N9T8 703 aaKnown RBP16.1■□□□□ 0.17
CSTF3-202ENST00000431742 TRIM43Q96BQ3 446 aaPredicted RBP16.1■□□□□ 0.17
CSTF3-202ENST00000431742 NOC4LQ9BVI4 516 aaKnown RBP16.1■□□□□ 0.17
CSTF3-202ENST00000431742 CSRNP2Q9H175 543 aa16.1■□□□□ 0.17
CSTF3-202ENST00000431742 TMEM39AQ9NV64 488 aa16.1■□□□□ 0.17
CSTF3-202ENST00000431742 RCOR1Q9UKL0 485 aa16.1■□□□□ 0.17
CSTF3-202ENST00000431742 NR2E3Q9Y5X4 410 aa16.1■□□□□ 0.17
CSTF3-202ENST00000431742 DDX11L8A8MPP1 907 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 ZBTB39O15060 712 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 ABCB7O75027 752 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 XRCC6P12956 609 aaKnown RBP eCLIP16.09■□□□□ 0.17
CSTF3-202ENST00000431742 MTHFD1LQ6UB35 978 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 RUFY4Q6ZNE9 571 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 LINC01465Q8N7H1 131 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 CAGE1Q8TC20 777 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 KCNG4Q8TDN1 519 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 ZBTB10Q96DT7 871 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 CLIC6Q96NY7 704 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 PRDM5Q9NQX1 630 aaPredicted RBP16.09■□□□□ 0.17
CSTF3-202ENST00000431742 ANKEF1Q9NU02 776 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 CHMP5Q9NZZ3 219 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 NOD1Q9Y239 953 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 PPME1Q9Y570 386 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 PCDHA2Q9Y5H9 948 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 KDM3AQ9Y4C1 1321 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 TET1Q8NFU7 2136 aa16.09■□□□□ 0.17
CSTF3-202ENST00000431742 PITPNM1O00562 1244 aa16.08■□□□□ 0.16
CSTF3-202ENST00000431742 ITGB8P26012 769 aa16.08■□□□□ 0.16
CSTF3-202ENST00000431742 KLRC1P26715 233 aa16.08■□□□□ 0.16
CSTF3-202ENST00000431742 MTERF2Q49AM1 385 aa16.08■□□□□ 0.16
CSTF3-202ENST00000431742 TMEM119Q4V9L6 283 aa16.08■□□□□ 0.16
CSTF3-202ENST00000431742 AXDND1Q5T1B0 1012 aaPredicted RBP16.08■□□□□ 0.16
CSTF3-202ENST00000431742 TAF2Q6P1X5 1199 aa16.08■□□□□ 0.16
CSTF3-202ENST00000431742 TRMT1LQ7Z2T5 733 aaKnown RBP16.08■□□□□ 0.16
CSTF3-202ENST00000431742 RPAINQ86UA6 219 aa16.08■□□□□ 0.16
CSTF3-202ENST00000431742 ZNF579Q8NAF0 562 aaKnown RBP16.08■□□□□ 0.16
CSTF3-202ENST00000431742 LEO1Q8WVC0 666 aaPredicted RBP16.08■□□□□ 0.16
CSTF3-202ENST00000431742 PNMA5Q96PV4 448 aa16.08■□□□□ 0.16
CSTF3-202ENST00000431742 NACC1Q96RE7 527 aa16.08■□□□□ 0.16
CSTF3-202ENST00000431742 CCSER1Q9C0I3 900 aa16.08■□□□□ 0.16
CSTF3-202ENST00000431742 HIPK3Q9H422 1215 aa16.08■□□□□ 0.16
CSTF3-202ENST00000431742 CYP26B1Q9NR63 512 aa16.08■□□□□ 0.16
CSTF3-202ENST00000431742 DBR1Q9UK59 544 aaKnown RBP16.08■□□□□ 0.16
CSTF3-202ENST00000431742 UMODL1Q5DID0 1318 aa16.08■□□□□ 0.16
CSTF3-202ENST00000431742 IGKV6-21A0A0C4DH24 114 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 SMIM35A0A1B0GVV1 85 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 MAGEB2O15479 319 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 CAND2O75155 1236 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 TIMP1P01033 207 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 RARRES1P49788 294 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 NPEPPSP55786 919 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 GRB10Q13322 594 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 TRAF7Q6Q0C0 670 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 USP49Q70CQ1 688 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 OTUD6AQ7L8S5 288 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 CABP7Q86V35 215 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 KCTD17Q8N5Z5 321 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 CCDC155Q8N6L0 562 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 PIGOQ8TEQ8 1089 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 SYMPKQ92797 1274 aaKnown RBP16.07■□□□□ 0.16
CSTF3-202ENST00000431742 SH2D3AQ9BRG2 576 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 WNT8AQ9H1J5 351 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 DHX33Q9H6R0 707 aaKnown RBP16.07■□□□□ 0.16
CSTF3-202ENST00000431742 DDX19AQ9NUU7 478 aaKnown RBP16.07■□□□□ 0.16
CSTF3-202ENST00000431742 ZMYND8Q9ULU4 1186 aaPredicted RBP16.07■□□□□ 0.16
CSTF3-202ENST00000431742 KIAA1024Q9UPX6 916 aa16.07■□□□□ 0.16
CSTF3-202ENST00000431742 CUTAO60888 179 aa16.06■□□□□ 0.16
CSTF3-202ENST00000431742 MAFO75444 373 aaPredicted RBP16.06■□□□□ 0.16
CSTF3-202ENST00000431742 RPLP2P05387 115 aaKnown RBP16.06■□□□□ 0.16
CSTF3-202ENST00000431742 CKBP12277 381 aa16.06■□□□□ 0.16
CSTF3-202ENST00000431742 SYN1P17600 705 aa16.06■□□□□ 0.16
CSTF3-202ENST00000431742 UBA7P41226 1012 aa16.06■□□□□ 0.16
CSTF3-202ENST00000431742 TBC1D8BQ0IIM8 1120 aa16.06■□□□□ 0.16
CSTF3-202ENST00000431742 BFSP2Q13515 415 aa16.06■□□□□ 0.16
CSTF3-202ENST00000431742 XKR9Q5GH70 373 aa16.06■□□□□ 0.16
CSTF3-202ENST00000431742 KCNK18Q7Z418 384 aa16.06■□□□□ 0.16
CSTF3-202ENST00000431742 EPSTI1Q96J88 318 aa16.06■□□□□ 0.16
CSTF3-202ENST00000431742 CEP170P1Q96L14 293 aa16.06■□□□□ 0.16
CSTF3-202ENST00000431742 PPP1R12CQ9BZL4 782 aa16.06■□□□□ 0.16
CSTF3-202ENST00000431742 SCAND2PQ9GZW5 306 aaPredicted RBP16.06■□□□□ 0.16
CSTF3-202ENST00000431742 NT5C3AQ9H0P0 336 aa16.06■□□□□ 0.16
CSTF3-202ENST00000431742 PCDH10Q9P2E7 1040 aa16.06■□□□□ 0.16
CSTF3-202ENST00000431742 PRKAG2Q9UGJ0 569 aa16.06■□□□□ 0.16
CSTF3-202ENST00000431742 PCDHA7Q9UN72 937 aa16.06■□□□□ 0.16
CSTF3-202ENST00000431742 A0A087WWV3 80 aa16.05■□□□□ 0.16
CSTF3-202ENST00000431742 RAG1P15918 1043 aa16.05■□□□□ 0.16
CSTF3-202ENST00000431742 NCLP19338 710 aaKnown RBP16.05■□□□□ 0.16
CSTF3-202ENST00000431742 CYP2C18P33260 490 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms