RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 CAND1Q86VP6 1230 aaKnown RBP5.78□□□□□ -1.48
PTPN4-203ENST00000430976 KCNG4Q8TDN1 519 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 KIFAP3Q92845 792 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 SLF1Q9BQI6 1058 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 ADAM19Q9H013 955 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 VPS11Q9H270 941 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 ZC3H7BQ9UGR2 993 aaKnown RBP5.78□□□□□ -1.48
PTPN4-203ENST00000430976 SOX13Q9UN79 622 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 PCDHGA1Q9Y5H4 931 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 ZNF335Q9H4Z2 1342 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-203ENST00000430976 PSMD11O00231 422 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 ZBTB39O15060 712 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 PLSCR1O15162 318 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 ATP9BO43861 1147 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 IFNB1P01574 187 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 CLUP10909 449 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 BCRP11274 1271 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 GALNSP34059 522 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 LIMK1P53667 647 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 ZNF792Q3KQV3 632 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 SNAP47Q5SQN1 464 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 HYIQ5T013 277 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 HDXQ7Z353 690 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 LRRTM3Q86VH5 581 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 SYT2Q8N9I0 419 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-203ENST00000430976 ZNF540Q8NDQ6 660 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 IRGQQ8WZA9 623 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 GAS2L1Q99501 681 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-203ENST00000430976 YIPF4Q9BSR8 244 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 OXCT2Q9BYC2 517 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-203ENST00000430976 NLRC4Q9NPP4 1024 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 SMYD2Q9NRG4 433 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 HMGXB4Q9UGU5 601 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 CDC23Q9UJX2 597 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 PCDHB3Q9Y5E6 796 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 SQORQ9Y6N5 450 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 KCNQ3O43525 872 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 CD4P01730 458 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 PLCG2P16885 1265 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 PTGS1P23219 599 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 TOGARAM2Q6ZUX3 1019 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 MARK2Q7KZI7 788 aaKnown RBP5.78□□□□□ -1.48
PTPN4-203ENST00000430976 SPATA2LQ8IUW3 424 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-203ENST00000430976 TCAIMQ8N3R3 496 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 MTMR14Q8NCE2 650 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 CALML6Q8TD86 181 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 PRPF31Q8WWY3 499 aaKnown RBP5.78□□□□□ -1.48
PTPN4-203ENST00000430976 BRF1Q92994 677 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 THAP11Q96EK4 314 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 WDR24Q96S15 920 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 EFHD1Q9BUP0 239 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 ZSWIM5Q9P217 1185 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 C15orf41Q9Y2V0 281 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 FARP1Q9Y4F1 1045 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-203ENST00000430976 GMEB1Q9Y692 573 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 VWA3AA6NCI4 1184 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 NBPF26B4DH59 902 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 KERAO60938 352 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 THEGLP0DJG4 465 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 ATP6V1B1P15313 513 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 NOS2P35228 1153 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 PDE1BQ01064 536 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 MAPKAPK3Q16644 382 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 CCDC62Q6P9F0 684 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 ZNF852Q6ZMS4 543 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 ZNF804AQ7Z570 1209 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 ALDH16A1Q8IZ83 802 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 IFNL2Q8IZJ0 200 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 FAM26EQ8N5C1 309 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 C12orf50Q8NA57 414 aaPredicted RBP5.77□□□□□ -1.48
PTPN4-203ENST00000430976 CHAMP1Q96JM3 812 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 HAUS8Q9BT25 410 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 LSM14BQ9BX40 385 aaKnown RBP5.77□□□□□ -1.48
PTPN4-203ENST00000430976 LNPEPQ9UIQ6 1025 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 CPSF3Q9UKF6 684 aaKnown RBP5.77□□□□□ -1.48
PTPN4-203ENST00000430976 ZNF148Q9UQR1 794 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 CBY1Q9Y3M2 126 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 MAD1L1Q9Y6D9 718 aa5.77□□□□□ -1.48
PTPN4-203ENST00000430976 C15orf38-AP3S2A0A0A6YYH1 394 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 TYW5A2RUC4 315 aaKnown RBP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 E7ENQ6 273 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 CTIFO43310 598 aaKnown RBP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 KLHL2O95198 593 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 FYNP06241 537 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 ZFYP08048 801 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 RFC4P35249 363 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 CCT5P48643 541 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 CLCN6P51797 869 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 AK2P54819 239 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 TFAP4Q01664 338 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 STRN3Q13033 797 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 DSG2Q14126 1118 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 WSCD2Q2TBF2 565 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 SPDYCQ5MJ68 293 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 LDLRAD1Q5T700 205 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 CDKL2Q92772 493 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 SGK3Q96BR1 496 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 TBATAQ96M53 351 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 PRAM1Q96QH2 718 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 TRIM62Q9BVG3 475 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms