RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 NECAB2Q7Z6G3 386 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 EXOC8Q8IYI6 725 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 CEP57L1Q8IYX8 460 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 RAD54LQ92698 747 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 DHX58Q96C10 678 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 CEP170P1Q96L14 293 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 NIFKQ9BYG3 293 aaKnown RBP12.27□□□□□ -0.45
CHD4-202ENST00000430771 BHMT2Q9H2M3 363 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 CYP26B1Q9NR63 512 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 GTF2IRD1Q9UHL9 959 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 E9PMD0 336 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 POLR2DO15514 142 aaKnown RBP12.26□□□□□ -0.45
CHD4-202ENST00000430771 GAS2O43903 313 aaKnown RBP12.26□□□□□ -0.45
CHD4-202ENST00000430771 KINO60870 393 aaKnown RBP12.26□□□□□ -0.45
CHD4-202ENST00000430771 DGAT1O75907 488 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 MBD3O95983 291 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 RPLP2P05387 115 aaKnown RBP12.26□□□□□ -0.45
CHD4-202ENST00000430771 COL6A1P12109 1028 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 INSRRP14616 1297 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 RFC5P40937 340 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 RARRES1P49788 294 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 NDUFA8P51970 172 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 POLGP54098 1239 aaPredicted RBP12.26□□□□□ -0.45
CHD4-202ENST00000430771 TBC1D8BQ0IIM8 1120 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 E2F4Q16254 413 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 NBPF20Q3BBV1 942 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 PIGOQ8TEQ8 1089 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 LMBR1Q8WVP7 490 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 SLC7A3Q8WY07 619 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 PLIN2Q99541 437 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 LRRC27Q9C0I9 530 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 SENP6Q9GZR1 1112 aaPredicted RBP12.26□□□□□ -0.45
CHD4-202ENST00000430771 TNMDQ9H2S6 317 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 RNPEPQ9H4A4 650 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 GOLPH3LQ9H4A5 285 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 ATP6V0A4Q9HBG4 840 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 KCND2Q9NZV8 630 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 HDAC6Q9UBN7 1215 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 TUBE1Q9UJT0 475 aa12.26□□□□□ -0.45
CHD4-202ENST00000430771 A0A087X0B3 334 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 ARVCFO00192 962 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 MAGEB2O15479 319 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 USO1O60763 962 aaKnown RBP12.25□□□□□ -0.45
CHD4-202ENST00000430771 GADD45BO75293 160 aaPredicted RBP12.25□□□□□ -0.45
CHD4-202ENST00000430771 STBD1O95210 358 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 SSBP05455 408 aaKnown RBP eCLIP12.25□□□□□ -0.45
CHD4-202ENST00000430771 PLA2G4BP0C869 781 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 HOXC8P31273 242 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 MCM4P33991 863 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 MNX1P50219 401 aaPredicted RBP12.25□□□□□ -0.45
CHD4-202ENST00000430771 IGBP1P78318 339 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 AMPD3Q01432 767 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 EMC2Q15006 297 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 NAALADL2Q58DX5 795 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 SV2BQ7L1I2 683 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 KCNK18Q7Z418 384 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 SYT2Q8N9I0 419 aaPredicted RBP12.25□□□□□ -0.45
CHD4-202ENST00000430771 RETREG2Q8NC44 543 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 MCPH1Q8NEM0 835 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 DIS3LQ8TF46 1054 aaKnown RBP12.25□□□□□ -0.45
CHD4-202ENST00000430771 PAWRQ96IZ0 340 aaKnown RBP12.25□□□□□ -0.45
CHD4-202ENST00000430771 MTRQ99707 1265 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 TIPINQ9BVW5 301 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 LMBRD1Q9NUN5 540 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 BLOC1S4Q9NUP1 217 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 NOD1Q9Y239 953 aa12.25□□□□□ -0.45
CHD4-202ENST00000430771 TMEM150BA6NC51 233 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 CCDC85CA6NKD9 419 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 TLR3O15455 904 aaKnown RBP12.24□□□□□ -0.45
CHD4-202ENST00000430771 ZNF202O95125 648 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 C22orf31O95567 290 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 KRT18P05783 430 aaKnown RBP12.24□□□□□ -0.45
CHD4-202ENST00000430771 EN2P19622 333 aaPredicted RBP12.24□□□□□ -0.45
CHD4-202ENST00000430771 TMOD1P28289 359 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 SLC12A3P55017 1021 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 NPEPPSP55786 919 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 SOX10P56693 466 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 SNX17Q15036 470 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 TARBP2Q15633 366 aaKnown RBP12.24□□□□□ -0.45
CHD4-202ENST00000430771 C1orf53Q5VUE5 145 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 KANK3Q6NY19 840 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 TAF2Q6P1X5 1199 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 PADI6Q6TGC4 694 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 GPBP1Q86WP2 473 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 SLC43A3Q8NBI5 491 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 CNNM3Q8NE01 707 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 MAP7D2Q96T17 732 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 PANK2Q9BZ23 570 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 SETD4Q9NVD3 440 aa12.24□□□□□ -0.45
CHD4-202ENST00000430771 HOOK1Q9UJC3 728 aaKnown RBP12.24□□□□□ -0.45
CHD4-202ENST00000430771 MYH11P35749 1972 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 TANC1Q9C0D5 1861 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 GRIN2DO15399 1336 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 MBLAC1A4D2B0 266 aaPredicted RBP12.23□□□□□ -0.45
CHD4-202ENST00000430771 ZBTB42B2RXF5 422 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 ACTN4O43707 911 aaKnown RBP12.23□□□□□ -0.45
CHD4-202ENST00000430771 MAFO75444 373 aaPredicted RBP12.23□□□□□ -0.45
CHD4-202ENST00000430771 MYL1P05976 194 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 SLFN14P0C7P3 912 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 MCM6Q14566 821 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms