RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 PXMP2Q9NR77 195 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 RNF181Q9P0P0 153 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 PITPNM2Q9BZ72 1349 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 DOCK5Q9H7D0 1870 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 ZMYM2Q9UBW7 1377 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 BACH1O14867 736 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 ZNF185O15231 689 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 BUB1O43683 1085 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 TLR2O60603 784 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 USP2O75604 605 aaPredicted RBP11.13□□□□□ -0.63
RPE-206ENST00000429921 MOCS3O95396 460 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 MRPS25P82663 173 aaKnown RBP11.13□□□□□ -0.63
RPE-206ENST00000429921 CNTN2Q02246 1040 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 CLMNQ96JQ2 1002 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 PDCD2LQ9BRP1 358 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 PARVGQ9HBI0 331 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 ARMCX3Q9UH62 379 aaPredicted RBP11.13□□□□□ -0.63
RPE-206ENST00000429921 UBIAD1Q9Y5Z9 338 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 COL11A1P12107 1806 aaPredicted RBP11.13□□□□□ -0.63
RPE-206ENST00000429921 CTAGE9A4FU28 777 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 TADA3O75528 432 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 KIF11P52732 1056 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 TRAF1Q13077 416 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 SEMA3FQ13275 785 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 VGLL4Q14135 290 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 MEA1Q16626 185 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 EEPD1Q7L9B9 569 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 MCF2L2Q86YR7 1114 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 SYCP3Q8IZU3 236 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 UPF1Q92900 1129 aaKnown RBP eCLIP11.13□□□□□ -0.631e-6■□□□□ 10.1
RPE-206ENST00000429921 JADE2Q9NQC1 790 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 TCEAL9Q9UHQ7 104 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 SALL4Q9UJQ4 1053 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 RPTORQ8N122 1335 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 SSC5DA1L4H1 1573 aa11.13□□□□□ -0.63
RPE-206ENST00000429921 GOLGA8IPA6NC78 632 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 GOLGA8JA6NMD2 632 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 K7ENM7 598 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 NCK2O43639 380 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 RHOXF2BP0C7M4 288 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 PCNX4Q63HM2 1172 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 PDXDC1Q6P996 788 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 FIZ1Q96SL8 496 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 RHOXF2Q9BQY4 288 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 ELP3Q9H9T3 547 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 ZNF446Q9NWS9 450 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 SMARCAL1Q9NZC9 954 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 FHOD1Q9Y613 1164 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 SLC16A4O15374 487 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 NR3C2P08235 984 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 ZSCAN20P17040 1043 aaPredicted RBP11.12□□□□□ -0.63
RPE-206ENST00000429921 CXCR5P32302 372 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 CYLC1P35663 651 aaPredicted RBP11.12□□□□□ -0.63
RPE-206ENST00000429921 SETQ01105 290 aaPredicted RBP11.12□□□□□ -0.63
RPE-206ENST00000429921 MAPK7Q13164 816 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 XKR9Q5GH70 373 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 FAM102BQ5T8I3 360 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 B3GNT9Q6UX72 402 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 GADL1Q6ZQY3 521 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.12□□□□□ -0.63
RPE-206ENST00000429921 ZNF720Q7Z2F6 126 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 CEP63Q96MT8 703 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 CCDC43Q96MW1 224 aaKnown RBP11.12□□□□□ -0.63
RPE-206ENST00000429921 PAGR1Q9BTK6 254 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 PACSIN1Q9BY11 444 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 EHD2Q9NZN4 543 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 ZNF214Q9UL59 606 aaPredicted RBP11.12□□□□□ -0.63
RPE-206ENST00000429921 PCDHA13Q9Y5I0 950 aa11.12□□□□□ -0.63
RPE-206ENST00000429921 RBBP6Q7Z6E9 1792 aaKnown RBP11.12□□□□□ -0.63
RPE-206ENST00000429921 CALUO43852 315 aaPredicted RBP11.11□□□□□ -0.63
RPE-206ENST00000429921 RGS20O76081 388 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 LMNB1P20700 586 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 YWHABP31946 246 aaKnown RBP11.11□□□□□ -0.63
RPE-206ENST00000429921 USP14P54578 494 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 NAP1L1P55209 391 aaKnown RBP11.11□□□□□ -0.63
RPE-206ENST00000429921 PEX3P56589 373 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 DLG4P78352 724 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 TTLL12Q14166 644 aaPredicted RBP11.11□□□□□ -0.63
RPE-206ENST00000429921 SPA17Q15506 151 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 APOBEC3FQ8IUX4 373 aaKnown RBP11.11□□□□□ -0.63
RPE-206ENST00000429921 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 NAPGQ99747 312 aaPredicted RBP11.11□□□□□ -0.63
RPE-206ENST00000429921 IFIH1Q9BYX4 1025 aaKnown RBP11.11□□□□□ -0.63
RPE-206ENST00000429921 TYW1Q9NV66 732 aaKnown RBP11.11□□□□□ -0.63
RPE-206ENST00000429921 TMOD4Q9NZQ9 345 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 ZNF112Q9UJU3 913 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 PLAGL2Q9UPG8 496 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 CAPN6Q9Y6Q1 641 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 P4HBP07237 508 aaKnown RBP11.11□□□□□ -0.63
RPE-206ENST00000429921 XRCC5P13010 732 aaKnown RBP11.11□□□□□ -0.63
RPE-206ENST00000429921 CLCN6P51797 869 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 HGSNATQ68CP4 663 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 SEPT14Q6ZU15 432 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 RETREG2Q8NC44 543 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 REPS2Q8NFH8 660 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 RIT2Q99578 217 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 GTPBP4Q9BZE4 634 aaKnown RBP11.11□□□□□ -0.63
RPE-206ENST00000429921 AS3MTQ9HBK9 375 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 A1CFQ9NQ94 594 aaKnown RBP11.11□□□□□ -0.63
RPE-206ENST00000429921 GABBR1Q9UBS5 961 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms