RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SP3Q02447 781 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 ANKRD23Q86SG2 305 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 IQCGQ9H095 443 aaKnown RBP14.08□□□□□ -0.16
PTCH1-207ENST00000429896 FAM207AQ9NSI2 230 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-207ENST00000429896 PP2D1A8MPX8 630 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 MAGEB2O15479 319 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 KRT86O43790 486 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 FDPSP14324 419 aaKnown RBP14.08□□□□□ -0.16
PTCH1-207ENST00000429896 PCNX4Q63HM2 1172 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 SYTL5Q8TDW5 730 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-207ENST00000429896 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.08□□□□□ -0.16
PTCH1-207ENST00000429896 TOPORSQ9NS56 1045 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-207ENST00000429896 SUCLA2Q9P2R7 463 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-207ENST00000429896 SLC26A4O43511 780 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 CTDNEP1O95476 244 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 MYO1EQ12965 1108 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 TMCO4Q5TGY1 634 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 RDM1Q8NG50 284 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 RGL1Q9NZL6 768 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 TCF7P36402 384 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-207ENST00000429896 PCSK9Q8NBP7 692 aaKnown RBP14.07□□□□□ -0.16
PTCH1-207ENST00000429896 MTIF3Q9H2K0 278 aaKnown RBP14.07□□□□□ -0.16
PTCH1-207ENST00000429896 MYPNQ86TC9 1320 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 ERCC5P28715 1186 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-207ENST00000429896 CYP4F22Q6NT55 531 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 LRRC45Q96CN5 670 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 CNOT6LQ96LI5 555 aaKnown RBP14.07□□□□□ -0.16
PTCH1-207ENST00000429896 TIPINQ9BVW5 301 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 RANBP17Q9H2T7 1088 aaKnown RBP14.07□□□□□ -0.16
PTCH1-207ENST00000429896 SNX25Q9H3E2 840 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 COL18A1P39060 1754 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 CLDN3O15551 220 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 RFC5P40937 340 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 RIOX2Q8IUF8 465 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 THNSL1Q8IYQ7 743 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 SMYD4Q8IYR2 804 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-207ENST00000429896 GPT2Q8TD30 523 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 FBF1Q8TES7 1133 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 CAPNS2Q96L46 248 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 CCDC114Q96M63 670 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 PAXBP1Q9Y5B6 917 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 UAP1Q16222 522 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-207ENST00000429896 IER5Q5VY09 327 aa14.07□□□□□ -0.16
PTCH1-207ENST00000429896 C17orf102A2RUQ5 167 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 RRN3P2A6NIE6 340 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 ZNF568Q3ZCX4 644 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 HESX1Q9UBX0 185 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 DGAT1O75907 488 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 PRKCEQ02156 737 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 CUL4BQ13620 913 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 PPP4R3CPQ6ZMV5 832 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-207ENST00000429896 INPP5FQ9Y2H2 1132 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 PPP2R5CQ13362 524 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 CYP26C1Q6V0L0 522 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 IFT81Q8WYA0 676 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 MRPL4Q9BYD3 311 aaKnown RBP14.06□□□□□ -0.16
PTCH1-207ENST00000429896 AK9Q5TCS8 1911 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 HBP1O60381 514 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 RNASE9P60153 205 aaKnown RBP14.06□□□□□ -0.16
PTCH1-207ENST00000429896 FKBP3Q00688 224 aaKnown RBP14.06□□□□□ -0.16
PTCH1-207ENST00000429896 KLHL30Q0D2K2 578 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 PPM1KQ8N3J5 372 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 ZNF668Q96K58 619 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-207ENST00000429896 NT5C1BQ96P26 610 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 TSGA10Q9BZW7 698 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 SEL1LQ9UBV2 794 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 DNAI1Q9UI46 699 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 ZNF233A6NK53 670 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 HIP1RO75146 1068 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 ATXN8OSP0DMR3 200 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 CFAP58Q5T655 872 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 RASGRP2Q7LDG7 609 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 TEX2Q8IWB9 1127 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 PVALEFA0A1B0GWK0 134 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 COBLO75128 1261 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 TOMM70O94826 608 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 SREBF1P36956 1147 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 SPRYD7Q5W111 196 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 ZNF746Q6NUN9 644 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-207ENST00000429896 ARMCX2Q7L311 632 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 BAG1Q99933 345 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-207ENST00000429896 SLC38A10Q9HBR0 1119 aa14.06□□□□□ -0.16
PTCH1-207ENST00000429896 AFPP02771 609 aaKnown RBP14.05□□□□□ -0.16
PTCH1-207ENST00000429896 EFNA5P52803 228 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 MFAP3P55082 362 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 SF3A3Q12874 501 aaKnown RBP eCLIP14.05□□□□□ -0.16
PTCH1-207ENST00000429896 COASYQ13057 564 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 PPP2R5DQ14738 602 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 MICALCLQ6ZW33 695 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 RWDD2AQ9UIY3 292 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.05□□□□□ -0.16
PTCH1-207ENST00000429896 GOLGA8IPA6NC78 632 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 GOLGA8JA6NMD2 632 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 CTSHP09668 335 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 SLC51AQ86UW1 340 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 KCNJ6P48051 423 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 LACTBP83111 547 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-207ENST00000429896 MXD4Q14582 209 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-207ENST00000429896 CCDC6Q16204 474 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms