RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 METTL14Q9HCE5 456 aaKnown RBP14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 SIX2Q9NPC8 291 aa14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 AJAP1Q9UKB5 411 aaPredicted RBP14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 UBAP1LF5GYI3 381 aa14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 KCNK3O14649 394 aa14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 SLC16A3O15427 465 aaKnown RBP14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 RAD51CO43502 376 aa14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 TNNC1P63316 161 aa14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 TCERG1LQ5VWI1 586 aa14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 DNAAF5Q86Y56 855 aa14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 GMCL1P1Q8NEA9 526 aa14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 CYP2W1Q8TAV3 490 aa14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 SLC35C1Q96A29 364 aa14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 GMCL1Q96IK5 515 aa14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 GOLPH3Q9H4A6 298 aa14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 FBXL5Q9UKA1 691 aa14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 NENFQ9UMX5 172 aa14.56□□□□□ -0.08
SNRNP200-202ENST00000429650 OPLAHO14841 1288 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 EIF3HO15372 352 aaKnown RBP eCLIP14.55□□□□□ -0.085e-7■■□□□ 12.6
SNRNP200-202ENST00000429650 GDF11O95390 407 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 GCNT3O95395 438 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 KRT14P02533 472 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 RPL13P26373 211 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 JAM2P57087 298 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 CORO7P57737 925 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 GNGT1P63211 74 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 SKOR1P84550 965 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 KCNA1Q09470 495 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 IKQ13123 557 aaPredicted RBP14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 TRADDQ15628 312 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 IFI16Q16666 785 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 DNAJC21Q5F1R6 531 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 CFAP58Q5T655 872 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 EIF2AK1Q9BQI3 630 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 POLR3CQ9BUI4 534 aaPredicted RBP14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 POLD4Q9HCU8 107 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 SPATA31A6Q5VVP1 1343 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 ZNF233A6NK53 670 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 EML1O00423 815 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 TBCAO75347 108 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 FLOT1O75955 427 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 EYA4O95677 639 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 HOXA13P31271 388 aaPredicted RBP14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 NOP2P46087 812 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 GUCY2FP51841 1108 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 SF3B2Q13435 895 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 PODNQ7Z5L7 613 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 KLHL7Q8IXQ5 586 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 PIK3R5Q8WYR1 880 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 PBKQ96KB5 322 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 RGL1Q9NZL6 768 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 GCNT4Q9P109 453 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 RABGAP1Q9Y3P9 1069 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 ATP8B3O60423 1300 aa14.55□□□□□ -0.08
SNRNP200-202ENST00000429650 SMCHD1A6NHR9 2005 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 CLIC2O15247 247 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 ANXA13P27216 316 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 ALDH1B1P30837 517 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 SKIDA1Q1XH10 827 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 WHAMMQ8TF30 809 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 MRIQ9BWK5 157 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 OLFML3Q9NRN5 406 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 ANKRD65E5RJM6 399 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 ZBTB48P10074 688 aaPredicted RBP14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 RBM5P52756 815 aaKnown RBP eCLIP14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 ABCB5Q2M3G0 1257 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 GJB7Q6PEY0 223 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 SH2D3CQ8N5H7 860 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 TPCN2Q8NHX9 752 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 ACTRT1Q8TDG2 376 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 SCFD2Q8WU76 684 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 PCDHB13Q9Y5F0 798 aa14.54□□□□□ -0.08
SNRNP200-202ENST00000429650 PCNTO95613 3336 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 TGFB1I1O43294 461 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 CYP3A4P08684 503 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 BMP3P12645 472 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 COL11A2P13942 1736 aaPredicted RBP14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 POLD1P28340 1107 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 MAGEA9P43362 315 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 CCT5P48643 541 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 TTC19Q6DKK2 380 aaPredicted RBP14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 RINT1Q6NUQ1 792 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 CD302Q8IX05 232 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 BCAS4Q8TDM0 211 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 BORCS6Q96GS4 357 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 SCN9AQ15858 1988 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 GTPBP10A4D1E9 387 aaKnown RBP14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 SFI1A8K8P3 1242 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 CEP104O60308 925 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 GAP43P17677 238 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 ZNF76P36508 570 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 PTPROQ16827 1216 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 KCTD16Q68DU8 428 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 TAF1DQ9H5J8 278 aaPredicted RBP14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 ZMYM2Q9UBW7 1377 aa14.53□□□□□ -0.08
SNRNP200-202ENST00000429650 IGLV3-22A0A075B6J6 115 aa14.52□□□□□ -0.08
SNRNP200-202ENST00000429650 DDX3XO00571 662 aaKnown RBP eCLIP14.52□□□□□ -0.08
SNRNP200-202ENST00000429650 H2AFZP0C0S5 128 aa14.52□□□□□ -0.08
SNRNP200-202ENST00000429650 ERVK-9P63128 1117 aa14.52□□□□□ -0.08
SNRNP200-202ENST00000429650 JAG1P78504 1218 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms