RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 PRELPP51888 382 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 BBS9Q3SYG4 887 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 RESP18Q5W5W9 173 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 TTLL11Q8NHH1 800 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 STRBPQ96SI9 672 aaKnown RBP13.73□□□□□ -0.21
LDB3-205ENST00000429277 BHMT2Q9H2M3 363 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 MFAP3LO75121 409 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 TOM1L1O75674 476 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 DYNLT1P63172 113 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
LDB3-205ENST00000429277 NNTQ13423 1086 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 MAPK6Q16659 721 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 SARM1Q6SZW1 724 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 TRIM62Q9BVG3 475 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 SUN2Q9UH99 717 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 PCDHB6Q9Y5E3 794 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 METP08581 1390 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 A0A087WUV0 522 aaPredicted RBP13.72□□□□□ -0.21
LDB3-205ENST00000429277 DCTN3O75935 186 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 KYAT1Q16773 422 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 DCLK2Q8N568 766 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 XXYLT1Q8NBI6 393 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 CYP26B1Q9NR63 512 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 MAPK13O15264 365 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 TRIM67Q6ZTA4 783 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 WDR75Q8IWA0 830 aaKnown RBP13.72□□□□□ -0.21
LDB3-205ENST00000429277 SAMSN1Q9NSI8 373 aaKnown RBP13.72□□□□□ -0.21
LDB3-205ENST00000429277 ZNF212Q9UDV6 495 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 PALLDQ8WX93 1383 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 LMNAP02545 664 aaKnown RBP13.72□□□□□ -0.21
LDB3-205ENST00000429277 CD58P19256 250 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 EIF2AK2P19525 551 aaKnown RBP13.72□□□□□ -0.21
LDB3-205ENST00000429277 ZBTB17Q13105 803 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 PODNQ7Z5L7 613 aa13.72□□□□□ -0.21
LDB3-205ENST00000429277 KPNA7A9QM74 516 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 NR1D1P20393 614 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 AP3M2P53677 418 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 PFKFB3Q16875 520 aaPredicted RBP13.71□□□□□ -0.21
LDB3-205ENST00000429277 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.71□□□□□ -0.21
LDB3-205ENST00000429277 RECQLP46063 649 aaPredicted RBP13.71□□□□□ -0.21
LDB3-205ENST00000429277 KRT31Q15323 416 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 UBE2SQ16763 222 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 ENOSF1Q7L5Y1 443 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 CRLF3Q8IUI8 442 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 GDAP1Q8TB36 358 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 ZNF341Q9BYN7 854 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.71□□□□□ -0.21
LDB3-205ENST00000429277 SPATA31E1Q6ZUB1 1445 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 CDHR2Q9BYE9 1310 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 ATP5HO75947 161 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 CA4P22748 312 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 IL1RL1Q01638 556 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 C2orf54Q08AI8 447 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 KLHL38Q2WGJ6 581 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 ACRBPQ8NEB7 543 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 OR6B3Q8NGW1 331 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 EEF2KMTQ96G04 330 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 TRIM4Q9C037 500 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 PIH1D3Q9NQM4 214 aaKnown RBP13.71□□□□□ -0.21
LDB3-205ENST00000429277 ADAM22Q9P0K1 906 aa13.71□□□□□ -0.21
LDB3-205ENST00000429277 SUCLA2Q9P2R7 463 aaPredicted RBP13.71□□□□□ -0.21
LDB3-205ENST00000429277 CLDN3O15551 220 aa13.71□□□□□ -0.22
LDB3-205ENST00000429277 RAD17O75943 681 aa13.71□□□□□ -0.22
LDB3-205ENST00000429277 MTMR1Q13613 665 aa13.71□□□□□ -0.22
LDB3-205ENST00000429277 ZKSCAN8Q15776 578 aaPredicted RBP13.71□□□□□ -0.22
LDB3-205ENST00000429277 FSCBQ5H9T9 825 aa13.71□□□□□ -0.22
LDB3-205ENST00000429277 NSUN6Q8TEA1 469 aaKnown RBP13.71□□□□□ -0.22
LDB3-205ENST00000429277 KIFC3Q9BVG8 833 aa13.71□□□□□ -0.22
LDB3-205ENST00000429277 ESRRAP11474 423 aaPredicted RBP13.7□□□□□ -0.22
LDB3-205ENST00000429277 MX2P20592 715 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 PEX3P56589 373 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 SPARCL1Q14515 664 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 LRRC31Q6UY01 552 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 BEST2Q8NFU1 509 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 PCDHA6Q9UN73 950 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 PCDHA8Q9Y5H6 950 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 MAP3K7O43318 606 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 ZRANB2O95218 330 aaKnown RBP eCLIP13.7□□□□□ -0.22
LDB3-205ENST00000429277 APOEP02649 317 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 MYBL1P10243 752 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 TSPY1Q01534 308 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 KRT80Q6KB66 452 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 DYNLL2Q96FJ2 89 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 ACAP3Q96P50 834 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 BPIFA3Q9BQP9 254 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 GCOM2Q9BZD3 368 aaPredicted RBP13.7□□□□□ -0.22
LDB3-205ENST00000429277 STAP1Q9ULZ2 295 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 SOWAHDA6NJG2 315 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 LGALS16A8MUM7 142 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 TEDDM1Q5T9Z0 273 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 TRIM72Q6ZMU5 477 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 NLRP4Q96MN2 994 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 FAM170AA1A519 330 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 SRGAP2CP0DJJ0 459 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 GPC5P78333 572 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 SUDS3Q9H7L9 328 aaPredicted RBP13.7□□□□□ -0.22
LDB3-205ENST00000429277 SCOCQ9UIL1 159 aa13.7□□□□□ -0.22
LDB3-205ENST00000429277 HUS1O60921 280 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 PLS3P13797 630 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 CTTNQ14247 550 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms