RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 PADI6Q6TGC4 694 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 SASS6Q6UVJ0 657 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 RBM43Q6ZSC3 357 aaKnown RBP10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 CREBRFQ8IUR6 639 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 SAMD3Q8N6K7 520 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 ERMNQ8TAM6 284 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 SOCS4Q8WXH5 440 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 SEPT1Q8WYJ6 367 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 SENP7Q9BQF6 1050 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 C16orf70Q9BSU1 422 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 POLR3CQ9BUI4 534 aaPredicted RBP10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 ZSWIM4Q9H7M6 989 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 VTA1Q9NP79 307 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 TRPC6Q9Y210 931 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 DIS3Q9Y2L1 958 aaKnown RBP10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 KAT6AQ92794 2004 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 VCANP13611 3396 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 IGHA2P01877 340 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 PSAPP07602 524 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 MYL3P08590 195 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 MYBP10242 640 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 SARSP49591 514 aaKnown RBP10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 PSMC5P62195 406 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 GNASQ5JWF2 1037 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 FAM102BQ5T8I3 360 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 SFR1Q86XK3 245 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 AOPEPQ8N6M6 819 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 FAM84AQ96KN4 292 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 UNC93B1Q9H1C4 597 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 XPNPEP1Q9NQW7 623 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 SETD4Q9NVD3 440 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 GINS2Q9Y248 185 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 SYNRGQ9UMZ2 1314 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 TTLL13PA6NNM8 815 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 HIP1RO75146 1068 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 PRCPP42785 496 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 CLCN3P51790 818 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 MAP2K1Q02750 393 aaPredicted RBP10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 HERC4Q5GLZ8 1057 aaPredicted RBP10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 HYIQ5T013 277 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 C1orf186Q6ZWK4 172 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 CDR2LQ86X02 465 aaPredicted RBP10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 ZSWIM2Q8NEG5 633 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 KAT2BQ92831 832 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 CDHR1Q96JP9 859 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 TSPY26PQ9H489 355 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 CBX8Q9HC52 389 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 TUBE1Q9UJT0 475 aa10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 MAFBQ9Y5Q3 323 aaPredicted RBP10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 SPTBN5Q9NRC6 3674 aaKnown RBP10.58□□□□□ -0.72
HMGCLL1-206ENST00000428842 NFASCO94856 1347 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 ARHGEF35A5YM69 484 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 MAFGO15525 162 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 ZNF500O60304 480 aaPredicted RBP10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 STAM2O75886 525 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 ATG7O95352 703 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 GH1P01241 217 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 HSPA1AP0DMV8 641 aaKnown RBP10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 HSPA1BP0DMV9 641 aaKnown RBP10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 TGFB3P10600 412 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 COASYQ13057 564 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 MAPK7Q13164 816 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 PLCB4Q15147 1175 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 MIS18BP1Q6P0N0 1132 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 ZNF467Q7Z7K2 595 aaPredicted RBP10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 METTL13Q8N6R0 699 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 SYT2Q8N9I0 419 aaPredicted RBP10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 OSBPL7Q9BZF2 842 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 PANK4Q9NVE7 773 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 ADGRA3Q8IWK6 1321 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 IGSF9BQ9UPX0 1349 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 H3BRB1 525 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 GTPBP6O43824 516 aaPredicted RBP10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 OFD1O75665 1012 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 PRPF6O94906 941 aaKnown RBP10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 EYA4O95677 639 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 OATP04181 439 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 ATP1A3P13637 1013 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 INSRRP14616 1297 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 MSNP26038 577 aaKnown RBP10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 GRK4P32298 578 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 JAK3P52333 1124 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 MKRN4PQ13434 485 aaPredicted RBP10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 MORC3Q14149 939 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 SPATA20Q8TB22 786 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 TIGD1Q96MW7 591 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 NT5C3AQ9H0P0 336 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 TUT1Q9H6E5 874 aaKnown RBP10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 AZI2Q9H6S1 392 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 TUFT1Q9NNX1 390 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 CYP26B1Q9NR63 512 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 SLC5A4Q9NY91 659 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 CTNND2Q9UQB3 1225 aa10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 MORC2Q9Y6X9 1032 aaPredicted RBP10.57□□□□□ -0.72
HMGCLL1-206ENST00000428842 ARID2Q68CP9 1835 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 ZNF236Q9UL36 1845 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 IGKV6D-21A0A0A0MT36 114 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 ZNF165P49910 485 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 KIAA0753Q2KHM9 967 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms