RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 LONP2Q86WA8 852 aa17.44■□□□□ 0.38
C9orf3-206ENST00000428313 IFNL3Q8IZI9 196 aa17.44■□□□□ 0.38
C9orf3-206ENST00000428313 LRRC57Q8N9N7 239 aa17.44■□□□□ 0.38
C9orf3-206ENST00000428313 FAM13CQ8NE31 585 aa17.44■□□□□ 0.38
C9orf3-206ENST00000428313 DYDC1Q8WWB3 177 aa17.44■□□□□ 0.38
C9orf3-206ENST00000428313 RNF25Q96BH1 459 aaPredicted RBP17.44■□□□□ 0.38
C9orf3-206ENST00000428313 EEF2KMTQ96G04 330 aa17.44■□□□□ 0.38
C9orf3-206ENST00000428313 NAP1L3Q99457 506 aaPredicted RBP17.44■□□□□ 0.38
C9orf3-206ENST00000428313 CCSER1Q9C0I3 900 aa17.44■□□□□ 0.38
C9orf3-206ENST00000428313 SLC4A4Q9Y6R1 1079 aa17.44■□□□□ 0.38
C9orf3-206ENST00000428313 ZNF532Q9HCE3 1301 aa17.43■□□□□ 0.38
C9orf3-206ENST00000428313 TLDC2A0PJX2 215 aa17.43■□□□□ 0.38
C9orf3-206ENST00000428313 MAGEA13PA6NCF6 341 aa17.43■□□□□ 0.38
C9orf3-206ENST00000428313 SIGLEC16A6NMB1 481 aa17.43■□□□□ 0.38
C9orf3-206ENST00000428313 ECE2O60344 883 aa17.43■□□□□ 0.38
C9orf3-206ENST00000428313 TLR2O60603 784 aa17.43■□□□□ 0.38
C9orf3-206ENST00000428313 AFPP02771 609 aaKnown RBP17.43■□□□□ 0.38
C9orf3-206ENST00000428313 VHLP40337 213 aa17.43■□□□□ 0.38
C9orf3-206ENST00000428313 SCNN1BP51168 640 aa17.43■□□□□ 0.38
C9orf3-206ENST00000428313 PI16Q6UXB8 463 aa17.43■□□□□ 0.38
C9orf3-206ENST00000428313 SYCP3Q8IZU3 236 aa17.43■□□□□ 0.38
C9orf3-206ENST00000428313 METTL13Q8N6R0 699 aa17.43■□□□□ 0.38
C9orf3-206ENST00000428313 GRAMD1AQ96CP6 724 aa17.43■□□□□ 0.38
C9orf3-206ENST00000428313 DCLRE1BQ9H816 532 aa17.43■□□□□ 0.38
C9orf3-206ENST00000428313 EPB41L4AQ9HCS5 686 aaPredicted RBP17.43■□□□□ 0.38
C9orf3-206ENST00000428313 STOML1Q9UBI4 398 aa17.43■□□□□ 0.38
C9orf3-206ENST00000428313 TTC7AQ9ULT0 858 aaPredicted RBP17.43■□□□□ 0.38
C9orf3-206ENST00000428313 ATP8B3O60423 1300 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 SMAPO00193 183 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 PRDM1O75626 825 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 OCRLQ01968 901 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 SLC17A8Q8NDX2 589 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 UCMAQ8WVF2 138 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 GBP5Q96PP8 586 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 USP20Q9Y2K6 914 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.42■□□□□ 0.38
C9orf3-206ENST00000428313 KIF13AQ9H1H9 1805 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 BCORQ6W2J9 1755 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 EYA4O95677 639 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 ITGA4P13612 1032 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 GM2AP17900 193 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 MCAMP43121 646 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 CACNA2D1P54289 1103 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 STK4Q13043 487 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 ZRSR2Q15696 482 aaKnown RBP17.42■□□□□ 0.38
C9orf3-206ENST00000428313 DUPD1Q68J44 220 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 RMDN2Q96LZ7 410 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 NLRP3Q96P20 1036 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 ZKSCAN3Q9BRR0 538 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 NMRK1Q9NWW6 199 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 GALNT8Q9NY28 637 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 ZNF510Q9Y2H8 683 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 SCN11AQ9UI33 1791 aa17.42■□□□□ 0.38
C9orf3-206ENST00000428313 PDE6AP16499 860 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 CD151P48509 253 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 DRG2P55039 364 aaKnown RBP17.41■□□□□ 0.38
C9orf3-206ENST00000428313 KLRC3Q07444 240 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 CNNM4Q6P4Q7 775 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 PIK3AP1Q6ZUJ8 805 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 TRIM42Q8IWZ5 723 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 ANKLE1Q8NAG6 615 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 PROCA1Q8NCQ7 364 aaPredicted RBP17.41■□□□□ 0.38
C9orf3-206ENST00000428313 CKAP2Q8WWK9 683 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 C7orf25Q9BPX7 421 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 SEMA6BQ9H3T3 888 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 GOPCQ9HD26 462 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 TCRBV5S4A2TA0A5A2 114 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 FAM187AA6NFU0 413 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 DESP17661 470 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 KCNA3P22001 575 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 ENOX2Q16206 610 aaKnown RBP17.41■□□□□ 0.38
C9orf3-206ENST00000428313 DDX23Q9BUQ8 820 aaKnown RBP17.41■□□□□ 0.38
C9orf3-206ENST00000428313 CELF4Q9BZC1 486 aaKnown RBP17.41■□□□□ 0.38
C9orf3-206ENST00000428313 SUCLA2Q9P2R7 463 aaPredicted RBP17.41■□□□□ 0.38
C9orf3-206ENST00000428313 CIDEBQ9UHD4 219 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 CASZ1Q86V15 1759 aa17.41■□□□□ 0.38
C9orf3-206ENST00000428313 NUP188Q5SRE5 1749 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 A0A087X0T9 212 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 TJP3O95049 919 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 ECEL1O95672 775 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 PCCAP05165 728 aaPredicted RBP17.4■□□□□ 0.38
C9orf3-206ENST00000428313 FAM228BP0C875 321 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 AUHQ13825 339 aaKnown RBP17.4■□□□□ 0.38
C9orf3-206ENST00000428313 HLFQ16534 295 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 GSTA3Q16772 222 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 GATA6Q92908 595 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 FAM163AQ96GL9 167 aaPredicted RBP17.4■□□□□ 0.38
C9orf3-206ENST00000428313 ERP44Q9BS26 406 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 PACSIN1Q9BY11 444 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 ROPN1BQ9BZX4 212 aaPredicted RBP17.4■□□□□ 0.38
C9orf3-206ENST00000428313 ROPN1Q9HAT0 212 aaPredicted RBP17.4■□□□□ 0.38
C9orf3-206ENST00000428313 NLRC4Q9NPP4 1024 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 V9GY48 417 aaPredicted RBP17.4■□□□□ 0.38
C9orf3-206ENST00000428313 SNRPA1P09661 255 aaKnown RBP17.4■□□□□ 0.38
C9orf3-206ENST00000428313 KCNA6P17658 529 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 UBA7P41226 1012 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 MGAT5Q09328 741 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 RCN2Q14257 317 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 SLC29A2Q14542 456 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 FAM83BQ5T0W9 1011 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms