RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 MRPL46Q9H2W6 279 aaKnown RBP6.15□□□□□ -1.42
HERC4-206ENST00000427635 KRT82Q9NSB4 513 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 TAB2Q9NYJ8 693 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 TJP2Q9UDY2 1190 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 DPP7Q9UHL4 492 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 MLH3Q9UHC1 1453 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 GRXCR2A6NFK2 248 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 MEIS1O00470 390 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 OAS2P29728 719 aaKnown RBP6.15□□□□□ -1.43
HERC4-206ENST00000427635 GCKP35557 465 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 GPC3P51654 580 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 BLVRAP53004 296 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 ZC3H12BQ5HYM0 836 aaKnown RBP6.15□□□□□ -1.43
HERC4-206ENST00000427635 TYW1BQ6NUM6 668 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 PDXDC1Q6P996 788 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 SCARA5Q6ZMJ2 495 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 MMS22LQ6ZRQ5 1243 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 ULK4Q96C45 1275 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 AGBL1Q96MI9 1066 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 ATP6V0A4Q9HBG4 840 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 FIS1Q9Y3D6 152 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 MED23Q9ULK4 1368 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 PHKG2P15735 406 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 PAX7P23759 505 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 MAPK4P31152 587 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 IL6STP40189 918 aaPredicted RBP6.15□□□□□ -1.43
HERC4-206ENST00000427635 IFNL3Q8IZI9 196 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 DCAF4Q8WV16 495 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 SPATA33Q96N06 139 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 RANBP17Q9H2T7 1088 aaKnown RBP6.15□□□□□ -1.43
HERC4-206ENST00000427635 ECT2Q9H8V3 914 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 KCNJ14Q9UNX9 436 aa6.15□□□□□ -1.43
HERC4-206ENST00000427635 MRPL42Q9Y6G3 142 aaKnown RBP6.15□□□□□ -1.43
HERC4-206ENST00000427635 LAD1O00515 517 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 SART1O43290 800 aaKnown RBP6.14□□□□□ -1.43
HERC4-206ENST00000427635 DYRK3O43781 588 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 ATP1A1P05023 1023 aaKnown RBP6.14□□□□□ -1.43
HERC4-206ENST00000427635 SERPIND1P05546 499 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 SCG2P13521 617 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 ADAM9Q13443 819 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 CAPRIN1Q14444 709 aaKnown RBP6.14□□□□□ -1.43
HERC4-206ENST00000427635 PTPAQ15257 358 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 ZSCAN23Q3MJ62 389 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 PREPLQ4J6C6 727 aaPredicted RBP6.14□□□□□ -1.43
HERC4-206ENST00000427635 TRIM68Q6AZZ1 485 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 MGARPQ8TDB4 240 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 SDR42E1Q8WUS8 393 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 SUCLG2Q96I99 432 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 ELP3Q9H9T3 547 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 RPRD1BQ9NQG5 326 aaKnown RBP6.14□□□□□ -1.43
HERC4-206ENST00000427635 NDFIP2Q9NV92 336 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 GPATCH8Q9UKJ3 1502 aaKnown RBP6.14□□□□□ -1.43
HERC4-206ENST00000427635 RNASEH1O60930 286 aaKnown RBP6.14□□□□□ -1.43
HERC4-206ENST00000427635 GCFC2P16383 781 aaKnown RBP6.14□□□□□ -1.43
HERC4-206ENST00000427635 ADD2P35612 726 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 ALDH1A3P47895 512 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 CYP4A11Q02928 519 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 GRIN1Q05586 938 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 LBRQ14739 615 aaKnown RBP6.14□□□□□ -1.43
HERC4-206ENST00000427635 ZNF438Q7Z4V0 828 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 TAB3Q8N5C8 712 aaPredicted RBP6.14□□□□□ -1.43
HERC4-206ENST00000427635 UCMAQ8WVF2 138 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 EXT2Q93063 718 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 DSCC1Q9BVC3 393 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 MAGEF1Q9HAY2 307 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 ZNF302Q9NR11 478 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 MSRAQ9UJ68 235 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 GDAQ9Y2T3 454 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 A6NNZ2 444 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 USP17L15C9J2P7 530 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 USP17L13C9JLJ4 530 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 USP17L11C9JVI0 530 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 USP17L18D6R9N7 530 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 USP17L22D6RA61 530 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 USP17L17D6RBQ6 530 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 USP17L19D6RCP7 530 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 USP17L20D6RJB6 530 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 K7ERI5 159 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 MYO1FO00160 1098 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 NLRP12P59046 1061 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 CYP27A1Q02318 531 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 USP17L24Q0WX57 530 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 TMEM132BQ14DG7 1078 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 RBBP7Q16576 425 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 TUBB8Q3ZCM7 444 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 ATG16L1Q676U5 607 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 FAM117BQ6P1L5 589 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 STX19Q8N4C7 294 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 RNF10Q8N5U6 811 aaKnown RBP6.14□□□□□ -1.43
HERC4-206ENST00000427635 VPS39Q96JC1 886 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 AFF4Q9UHB7 1163 aaKnown RBP6.14□□□□□ -1.43
HERC4-206ENST00000427635 hCG_1642624A0A1W2PR95 340 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 H3BRJ5 948 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 RGS16O15492 202 aaPredicted RBP6.14□□□□□ -1.43
HERC4-206ENST00000427635 COBLO75128 1261 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 CETPP11597 493 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 YY1P25490 414 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 KRT20P35900 424 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 FAM182BQ5T319 152 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 SNRNP48Q6IEG0 339 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms