RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 GJB5O95377 273 aa16.37■□□□□ 0.21
NCKIPSD-205ENST00000426678 C22orf31O95567 290 aa16.37■□□□□ 0.21
NCKIPSD-205ENST00000426678 GUCY1B3Q02153 619 aa16.37■□□□□ 0.21
NCKIPSD-205ENST00000426678 UGCGQ16739 394 aa16.37■□□□□ 0.21
NCKIPSD-205ENST00000426678 FAM117BQ6P1L5 589 aa16.37■□□□□ 0.21
NCKIPSD-205ENST00000426678 B3GNT9Q6UX72 402 aa16.37■□□□□ 0.21
NCKIPSD-205ENST00000426678 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.37■□□□□ 0.21
NCKIPSD-205ENST00000426678 TMCO2Q7Z6W1 182 aaPredicted RBP16.37■□□□□ 0.21
NCKIPSD-205ENST00000426678 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
NCKIPSD-205ENST00000426678 METTL13Q8N6R0 699 aa16.37■□□□□ 0.21
NCKIPSD-205ENST00000426678 EVPLQ92817 2033 aa16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 RBAK-RBAKDNI3L0D1 243 aa16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 MAGEB2O15479 319 aa16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 BAG4O95429 457 aaKnown RBP16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 PPP2R5CQ13362 524 aa16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 MKRN4PQ13434 485 aaPredicted RBP16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 GNL2Q13823 731 aaKnown RBP16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 SLFN12Q8IYM2 578 aa16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 USP38Q8NB14 1042 aa16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 TBC1D32Q96NH3 1257 aa16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 RAD9AQ99638 391 aa16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 CELF4Q9BZC1 486 aaKnown RBP16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 SEPT9Q9UHD8 586 aaPredicted RBP16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 VAV3Q9UKW4 847 aa16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 SQORQ9Y6N5 450 aa16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 KDM3AQ9Y4C1 1321 aa16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 MYO9BQ13459 2157 aa16.36■□□□□ 0.21
NCKIPSD-205ENST00000426678 LOXHD1Q8IVV2 1947 aa16.35■□□□□ 0.21
NCKIPSD-205ENST00000426678 TMOD1P28289 359 aa16.35■□□□□ 0.21
NCKIPSD-205ENST00000426678 PAK2Q13177 524 aa16.35■□□□□ 0.21
NCKIPSD-205ENST00000426678 XKR3Q5GH77 459 aa16.35■□□□□ 0.21
NCKIPSD-205ENST00000426678 KIAA0319LQ8IZA0 1049 aa16.35■□□□□ 0.21
NCKIPSD-205ENST00000426678 BANK1Q8NDB2 785 aa16.35■□□□□ 0.21
NCKIPSD-205ENST00000426678 MAFAQ8NHW3 353 aaPredicted RBP16.35■□□□□ 0.21
NCKIPSD-205ENST00000426678 HAS1Q92839 578 aa16.35■□□□□ 0.21
NCKIPSD-205ENST00000426678 MAP7D2Q96T17 732 aa16.35■□□□□ 0.21
NCKIPSD-205ENST00000426678 GINS2Q9Y248 185 aa16.35■□□□□ 0.21
NCKIPSD-205ENST00000426678 KIF3AQ9Y496 699 aa16.35■□□□□ 0.21
NCKIPSD-205ENST00000426678 NEMFO60524 1076 aa16.34■□□□□ 0.21
NCKIPSD-205ENST00000426678 DKC1O60832 514 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■■□□□ 12.2
NCKIPSD-205ENST00000426678 CD52P31358 61 aa16.34■□□□□ 0.21
NCKIPSD-205ENST00000426678 MCM2P49736 904 aa16.34■□□□□ 0.21
NCKIPSD-205ENST00000426678 PSMC5P62195 406 aa16.34■□□□□ 0.21
NCKIPSD-205ENST00000426678 TAP1Q03518 808 aa16.34■□□□□ 0.21
NCKIPSD-205ENST00000426678 TBC1D8BQ0IIM8 1120 aa16.34■□□□□ 0.21
NCKIPSD-205ENST00000426678 CALCRLQ16602 461 aa16.34■□□□□ 0.21
NCKIPSD-205ENST00000426678 NCAPH2Q6IBW4 605 aa16.34■□□□□ 0.21
NCKIPSD-205ENST00000426678 FBXO18Q8NFZ0 1043 aa16.34■□□□□ 0.21
NCKIPSD-205ENST00000426678 AGO3Q9H9G7 860 aaKnown RBP16.34■□□□□ 0.21
NCKIPSD-205ENST00000426678 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 LCHNA4D1U4 455 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 EML1O00423 815 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 UPP2O95045 317 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 ATP2B1P20020 1258 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 CLCN3P51790 818 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 MTERF2Q49AM1 385 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 EFCAB12Q6NXP0 572 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 LRRC71Q8N4P6 559 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 TOP1MTQ969P6 601 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 PPP1R16BQ96T49 567 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 FTHL17Q9BXU8 183 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 FOXP1Q9H334 677 aaPredicted RBP16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 CERS4Q9HA82 394 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 PADI3Q9ULW8 664 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 AKT3Q9Y243 479 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 INSL6Q9Y581 213 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 CHD9Q3L8U1 2897 aa16.33■□□□□ 0.2
NCKIPSD-205ENST00000426678 DDX11L8A8MPP1 907 aa16.32■□□□□ 0.2
NCKIPSD-205ENST00000426678 ARHGEF15O94989 841 aa16.32■□□□□ 0.2
NCKIPSD-205ENST00000426678 VTNP04004 478 aa16.32■□□□□ 0.2
NCKIPSD-205ENST00000426678 P4HBP07237 508 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-205ENST00000426678 IGFBP4P22692 258 aa16.32■□□□□ 0.2
NCKIPSD-205ENST00000426678 QARSP47897 775 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-205ENST00000426678 EPHA7Q15375 998 aa16.32■□□□□ 0.2
NCKIPSD-205ENST00000426678 KIZQ2M2Z5 673 aa16.32■□□□□ 0.2
NCKIPSD-205ENST00000426678 ODR4Q5SWX8 454 aa16.32■□□□□ 0.2
NCKIPSD-205ENST00000426678 ARNTL2Q8WYA1 636 aa16.32■□□□□ 0.2
NCKIPSD-205ENST00000426678 TMX3Q96JJ7 454 aa16.32■□□□□ 0.2
NCKIPSD-205ENST00000426678 YME1L1Q96TA2 773 aa16.32■□□□□ 0.2
NCKIPSD-205ENST00000426678 NIFKQ9BYG3 293 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-205ENST00000426678 SUGCTQ9HAC7 445 aa16.32■□□□□ 0.2
NCKIPSD-205ENST00000426678 RPS6KA5O75582 802 aa16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 MCM7P33993 719 aa16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 CRYBB1P53674 252 aaPredicted RBP16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 HTRA4P83105 476 aaPredicted RBP16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 NFX1Q12986 1120 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 TARBP2Q15633 366 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 TMEM266Q2M3C6 531 aa16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 ZNF710Q8N1W2 664 aa16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 SLC17A8Q8NDX2 589 aa16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 SCLT1Q96NL6 688 aa16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 TGS1Q96RS0 853 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 OSMRQ99650 979 aa16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 LXNQ9BS40 222 aa16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 NOL7Q9UMY1 257 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 PCDHA12Q9UN75 941 aa16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 COL6A3P12111 3177 aa16.31■□□□□ 0.2
NCKIPSD-205ENST00000426678 LINC01553A4QN01 128 aa16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 TMEM150BA6NC51 233 aa16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 WNT7AO00755 349 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms