RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 LRP5O75197 1615 aa17.39■□□□□ 0.37
PKP4-205ENST00000426248 GYPCP04921 128 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 LONP1P36776 959 aaKnown RBP17.38■□□□□ 0.37
PKP4-205ENST00000426248 NCAPG2Q86XI2 1143 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 ANKRD35Q8N283 1001 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 ALS2CR12Q96Q35 445 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 ZCWPW1Q9H0M4 648 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 RIOX1Q9H6W3 641 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 SRCAPQ6ZRS2 3230 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 CTNND1O60716 968 aaKnown RBP17.38■□□□□ 0.37
PKP4-205ENST00000426248 TMOD1P28289 359 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 PTGER2P43116 358 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 POLE2P56282 527 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 SPATA1Q5VX52 437 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 ALS2CLQ60I27 953 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 IFT20Q8IY31 132 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 TSEN2Q8NCE0 465 aaKnown RBP17.38■□□□□ 0.37
PKP4-205ENST00000426248 ZNF280CQ8ND82 737 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 CCDC51Q96ER9 411 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 TRIM47Q96LD4 638 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 CCDC42Q96M95 316 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 GMLQ99445 158 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 ADARB2Q9NS39 739 aaKnown RBP17.38■□□□□ 0.37
PKP4-205ENST00000426248 EHD2Q9NZN4 543 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 TMX2Q9Y320 296 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 TLDC2A0PJX2 215 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 AKR1B10O60218 316 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 FOSP01100 380 aaPredicted RBP17.38■□□□□ 0.37
PKP4-205ENST00000426248 MDH1P40925 334 aaKnown RBP17.38■□□□□ 0.37
PKP4-205ENST00000426248 PTPAQ15257 358 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 AGBL1Q96MI9 1066 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 TBC1D7Q9P0N9 293 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 FEM1BQ9UK73 627 aa17.38■□□□□ 0.37
PKP4-205ENST00000426248 ANP32DO95626 131 aa17.37■□□□□ 0.37
PKP4-205ENST00000426248 KLHL7Q8IXQ5 586 aa17.37■□□□□ 0.37
PKP4-205ENST00000426248 ROBO3Q96MS0 1386 aa17.37■□□□□ 0.37
PKP4-205ENST00000426248 TARSL2A2RTX5 802 aaKnown RBP17.37■□□□□ 0.37
PKP4-205ENST00000426248 GAS7O60861 476 aa17.37■□□□□ 0.37
PKP4-205ENST00000426248 PDE4DQ08499 809 aa17.37■□□□□ 0.37
PKP4-205ENST00000426248 ARHGEF16Q5VV41 709 aa17.37■□□□□ 0.37
PKP4-205ENST00000426248 TPH2Q8IWU9 490 aa17.37■□□□□ 0.37
PKP4-205ENST00000426248 OR8K1Q8NGG5 319 aa17.37■□□□□ 0.37
PKP4-205ENST00000426248 NAP1L4Q99733 375 aaKnown RBP17.37■□□□□ 0.37
PKP4-205ENST00000426248 RMND1Q9NWS8 449 aa17.37■□□□□ 0.37
PKP4-205ENST00000426248 TRPC6Q9Y210 931 aa17.37■□□□□ 0.37
PKP4-205ENST00000426248 VIMP08670 466 aaKnown RBP17.37■□□□□ 0.37
PKP4-205ENST00000426248 ARHGAP4P98171 946 aa17.37■□□□□ 0.37
PKP4-205ENST00000426248 FKBP1CQ5VVH2 108 aa17.37■□□□□ 0.37
PKP4-205ENST00000426248 TATDN1Q6P1N9 297 aa17.37■□□□□ 0.37
PKP4-205ENST00000426248 SLC10A4Q96EP9 437 aa17.37■□□□□ 0.37
PKP4-205ENST00000426248 GRIN3BO60391 1043 aa17.36■□□□□ 0.37
PKP4-205ENST00000426248 TRAPPC11Q7Z392 1133 aa17.36■□□□□ 0.37
PKP4-205ENST00000426248 RIC8AQ9NPQ8 531 aa17.36■□□□□ 0.37
PKP4-205ENST00000426248 GGT7Q9UJ14 662 aa17.36■□□□□ 0.37
PKP4-205ENST00000426248 A0A1B0GTH6 734 aa17.36■□□□□ 0.37
PKP4-205ENST00000426248 GMNCA6NCL1 334 aa17.36■□□□□ 0.37
PKP4-205ENST00000426248 EPHX2P34913 555 aa17.36■□□□□ 0.37
PKP4-205ENST00000426248 ARMC9Q7Z3E5 817 aa17.36■□□□□ 0.37
PKP4-205ENST00000426248 NOP53Q9NZM5 478 aaKnown RBP17.36■□□□□ 0.37
PKP4-205ENST00000426248 STIM2Q9P246 746 aa17.36■□□□□ 0.37
PKP4-205ENST00000426248 FAM107AO95990 144 aa17.36■□□□□ 0.37
PKP4-205ENST00000426248 PDHA1P08559 390 aa17.36■□□□□ 0.37
PKP4-205ENST00000426248 ATP2C1P98194 919 aaPredicted RBP17.36■□□□□ 0.37
PKP4-205ENST00000426248 PAK2Q13177 524 aa17.36■□□□□ 0.37
PKP4-205ENST00000426248 PHF20L1A8MW92 1017 aa17.36■□□□□ 0.37
PKP4-205ENST00000426248 BMP6P22004 513 aa17.36■□□□□ 0.37
PKP4-205ENST00000426248 SCTRP47872 440 aa17.36■□□□□ 0.37
PKP4-205ENST00000426248 SNRNP48Q6IEG0 339 aaKnown RBP17.36■□□□□ 0.37
PKP4-205ENST00000426248 MEIS1O00470 390 aa17.35■□□□□ 0.37
PKP4-205ENST00000426248 HEXIM1O94992 359 aaKnown RBP17.35■□□□□ 0.37
PKP4-205ENST00000426248 JAG1P78504 1218 aa17.35■□□□□ 0.37
PKP4-205ENST00000426248 RRP1BQ14684 758 aaKnown RBP17.35■□□□□ 0.37
PKP4-205ENST00000426248 TAF11Q15544 211 aa17.35■□□□□ 0.37
PKP4-205ENST00000426248 MAP1SQ66K74 1059 aaPredicted RBP17.35■□□□□ 0.37
PKP4-205ENST00000426248 TRIM58Q8NG06 486 aa17.35■□□□□ 0.37
PKP4-205ENST00000426248 CNKSR2Q8WXI2 1034 aa17.35■□□□□ 0.37
PKP4-205ENST00000426248 BATF3Q9NR55 127 aa17.35■□□□□ 0.37
PKP4-205ENST00000426248 IQCA1LA6NCM1 817 aa17.35■□□□□ 0.37
PKP4-205ENST00000426248 KIAA1024Q9UPX6 916 aa17.35■□□□□ 0.37
PKP4-205ENST00000426248 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.35■□□□□ 0.37
PKP4-205ENST00000426248 CTNNA1P35221 906 aaKnown RBP17.35■□□□□ 0.37
PKP4-205ENST00000426248 EMBQ6PCB8 327 aa17.35■□□□□ 0.37
PKP4-205ENST00000426248 MCF2L2Q86YR7 1114 aa17.35■□□□□ 0.37
PKP4-205ENST00000426248 SCYL3Q8IZE3 742 aa17.35■□□□□ 0.37
PKP4-205ENST00000426248 C3orf20Q8ND61 904 aa17.35■□□□□ 0.37
PKP4-205ENST00000426248 SEPT11Q9NVA2 429 aaKnown RBP17.35■□□□□ 0.37
PKP4-205ENST00000426248 TBCAO75347 108 aaKnown RBP17.34■□□□□ 0.37
PKP4-205ENST00000426248 PLCG1P19174 1290 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 ATG4CQ96DT6 458 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 TRIM4Q9C037 500 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 LRRD1A4D1F6 860 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 WNT7AO00755 349 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 PSMA7O14818 248 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 RASSF9O75901 435 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 OR2W6PQ8NHA6 318 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 TBC1D5Q92609 795 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 SAMD15Q9P1V8 674 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 DUSP10Q9Y6W6 482 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 FZD9O00144 591 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 PDE2AO00408 941 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms