RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 C22orf31O95567 290 aa15.35■□□□□ 0.05
SNX3-204ENST00000426155 MRPS6P82932 125 aaKnown RBP15.35■□□□□ 0.05
SNX3-204ENST00000426155 LPIN1Q14693 890 aa15.35■□□□□ 0.05
SNX3-204ENST00000426155 ZNF484Q5JVG2 852 aa15.35■□□□□ 0.05
SNX3-204ENST00000426155 FAM117BQ6P1L5 589 aa15.35■□□□□ 0.05
SNX3-204ENST00000426155 RPAINQ86UA6 219 aa15.35■□□□□ 0.05
SNX3-204ENST00000426155 HERC6Q8IVU3 1022 aa15.35■□□□□ 0.05
SNX3-204ENST00000426155 FBXO18Q8NFZ0 1043 aa15.35■□□□□ 0.05
SNX3-204ENST00000426155 ZNF576Q9H609 170 aa15.35■□□□□ 0.05
SNX3-204ENST00000426155 MYO9BQ13459 2157 aa15.35■□□□□ 0.05
SNX3-204ENST00000426155 SMIM35A0A1B0GVV1 85 aa15.34■□□□□ 0.05
SNX3-204ENST00000426155 SPDYE4A6NLX3 237 aa15.34■□□□□ 0.05
SNX3-204ENST00000426155 CA3P07451 260 aa15.34■□□□□ 0.05
SNX3-204ENST00000426155 PRR29P0C7W0 189 aa15.34■□□□□ 0.05
SNX3-204ENST00000426155 IKBKEQ14164 716 aa15.34■□□□□ 0.05
SNX3-204ENST00000426155 GRIN2CQ14957 1233 aa15.34■□□□□ 0.05
SNX3-204ENST00000426155 RAB30Q15771 203 aa15.34■□□□□ 0.05
SNX3-204ENST00000426155 FBXO47Q5MNV8 452 aa15.34■□□□□ 0.05
SNX3-204ENST00000426155 NCAPH2Q6IBW4 605 aa15.34■□□□□ 0.05
SNX3-204ENST00000426155 SPRED2Q7Z698 418 aa15.34■□□□□ 0.05
SNX3-204ENST00000426155 RSPH3Q86UC2 560 aa15.34■□□□□ 0.05
SNX3-204ENST00000426155 MYLIPQ8WY64 445 aa15.34■□□□□ 0.05
SNX3-204ENST00000426155 SEPT8Q92599 483 aa15.34■□□□□ 0.05
SNX3-204ENST00000426155 TNPO1Q92973 898 aaKnown RBP15.34■□□□□ 0.05
SNX3-204ENST00000426155 CDX2Q99626 313 aaPredicted RBP15.34■□□□□ 0.05
SNX3-204ENST00000426155 IFIH1Q9BYX4 1025 aaKnown RBP15.34■□□□□ 0.05
SNX3-204ENST00000426155 WRAP73Q9P2S5 460 aaPredicted RBP15.34■□□□□ 0.05
SNX3-204ENST00000426155 SEPT9Q9UHD8 586 aaPredicted RBP15.34■□□□□ 0.05
SNX3-204ENST00000426155 MSRAQ9UJ68 235 aa15.34■□□□□ 0.05
SNX3-204ENST00000426155 NLRC5Q86WI3 1866 aa15.33■□□□□ 0.05
SNX3-204ENST00000426155 TMEM265A0A087WTH1 108 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 ABHD14A-ACY1A0A1B0GW23 586 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.33■□□□□ 0.04
SNX3-204ENST00000426155 LCHNA4D1U4 455 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 MARCH6O60337 910 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 STBD1O95210 358 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 CD52P31358 61 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 CLCN3P51790 818 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 SPIRE1Q08AE8 756 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 PPP2R5CQ13362 524 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 NBR1Q14596 966 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 SAFBQ15424 915 aaKnown RBP eCLIP15.33■□□□□ 0.04
SNX3-204ENST00000426155 KIAA0319LQ8IZA0 1049 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 LRRC71Q8N4P6 559 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 FAM167AQ96KS9 214 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 FAM20AQ96MK3 541 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 NAP1L4Q99733 375 aaKnown RBP15.33■□□□□ 0.04
SNX3-204ENST00000426155 TMEM60Q9H2L4 133 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 AGO3Q9H9G7 860 aaKnown RBP15.33■□□□□ 0.04
SNX3-204ENST00000426155 CDHR5Q9HBB8 845 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 GINS2Q9Y248 185 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 PCDHA11Q9Y5I1 949 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 TRPV2Q9Y5S1 764 aa15.33■□□□□ 0.04
SNX3-204ENST00000426155 KIAA1671Q9BY89 1806 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 TBX3O15119 743 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 NEMFO60524 1076 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 VTNP04004 478 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 GJB2P29033 226 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 MCM7P33993 719 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 CALCRLQ16602 461 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 MTERF2Q49AM1 385 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 PPP2R2DQ66LE6 453 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 PLA2G4FQ68DD2 849 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 MYOCDQ8IZQ8 938 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 METTL13Q8N6R0 699 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 RDM1Q8NG50 284 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 PHOSPHO2Q8TCD6 241 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 TMEM40Q8WWA1 233 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 ZNF668Q96K58 619 aaPredicted RBP15.32■□□□□ 0.04
SNX3-204ENST00000426155 FOXP1Q9H334 677 aaPredicted RBP15.32■□□□□ 0.04
SNX3-204ENST00000426155 PRDM12Q9H4Q4 367 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 CERS4Q9HA82 394 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 SLC28A3Q9HAS3 691 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 COL4A6Q14031 1691 aa15.32■□□□□ 0.04
SNX3-204ENST00000426155 TRANK1O15050 2925 aa15.31■□□□□ 0.04
SNX3-204ENST00000426155 M0QZ92 97 aa15.31■□□□□ 0.04
SNX3-204ENST00000426155 TLL1O43897 1013 aa15.31■□□□□ 0.04
SNX3-204ENST00000426155 CYP4A11Q02928 519 aa15.31■□□□□ 0.04
SNX3-204ENST00000426155 GNL2Q13823 731 aaKnown RBP15.31■□□□□ 0.04
SNX3-204ENST00000426155 KIZQ2M2Z5 673 aa15.31■□□□□ 0.04
SNX3-204ENST00000426155 TMEM266Q2M3C6 531 aa15.31■□□□□ 0.04
SNX3-204ENST00000426155 IER5Q5VY09 327 aa15.31■□□□□ 0.04
SNX3-204ENST00000426155 TSHZ1Q6ZSZ6 1077 aa15.31■□□□□ 0.04
SNX3-204ENST00000426155 NOSTRINQ8IVI9 506 aa15.31■□□□□ 0.04
SNX3-204ENST00000426155 LINC01465Q8N7H1 131 aa15.31■□□□□ 0.04
SNX3-204ENST00000426155 LINC01599Q8WXQ3 324 aa15.31■□□□□ 0.04
SNX3-204ENST00000426155 DYDC2Q96IM9 177 aa15.31■□□□□ 0.04
SNX3-204ENST00000426155 CELF4Q9BZC1 486 aaKnown RBP15.31■□□□□ 0.04
SNX3-204ENST00000426155 RGL1Q9NZL6 768 aa15.31■□□□□ 0.04
SNX3-204ENST00000426155 GJB5O95377 273 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 TXKP42681 527 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 PSMC5P62195 406 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 DRP2Q13474 957 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 CTTNQ14247 550 aaKnown RBP15.3■□□□□ 0.04
SNX3-204ENST00000426155 TARBP2Q15633 366 aaKnown RBP15.3■□□□□ 0.04
SNX3-204ENST00000426155 ZNF174Q15697 407 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 XKR3Q5GH77 459 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 EFCAB12Q6NXP0 572 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 ANO5Q75V66 913 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 SLFN12Q8IYM2 578 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms