RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 MAGOHBQ96A72 148 aaKnown RBP8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 FAM163AQ96GL9 167 aaPredicted RBP8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 TRIM51Q9BSJ1 452 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 RGL1Q9NZL6 768 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 ATP8A1Q9Y2Q0 1164 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 COL22A1Q8NFW1 1626 aaPredicted RBP8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 GMNCA6NCL1 334 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 SMIM23A6NLE4 172 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 DCDC2CA8MYV0 355 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 FAM107AO95990 144 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 HOXD13P35453 343 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 CACNB3P54284 484 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 ARHGAP4P98171 946 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 CCDC121Q6ZUS5 278 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 SPATS2Q86XZ4 545 aaKnown RBP8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 KSR1Q8IVT5 923 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 PIGOQ8TEQ8 1089 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 CYFIP2Q96F07 1278 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 CCDC114Q96M63 670 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 AMFRQ9UKV5 643 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 UTP11Q9Y3A2 253 aaKnown RBP8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 NR2E1Q9Y466 385 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 RPL13P26373 211 aaKnown RBP8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 SHMT1P34896 483 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 STAT1P42224 750 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 IRX3P78415 501 aaPredicted RBP8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 ZNF211Q13398 564 aaPredicted RBP8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 EPHA7Q15375 998 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 DOK7Q18PE1 504 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 CYP2W1Q8TAV3 490 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 MDM1Q8TC05 714 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 CABS1Q96KC9 395 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 KCNMB3Q9NPA1 279 aa8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 ATF5Q9Y2D1 282 aaPredicted RBP8.2□□□□□ -1.1
SMARCC1-202ENST00000425518 H0YGN5 161 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 CHMP2AO43633 222 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 HOXA13P31271 388 aaPredicted RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 FNTAP49354 379 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 ARHGAP44Q17R89 818 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 SLFN13Q68D06 897 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 LRIG3Q6UXM1 1119 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 CPLX4Q7Z7G2 160 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 SLFN12Q8IYM2 578 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 RDH13Q8NBN7 331 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 UHMK1Q8TAS1 419 aaKnown RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 NGLY1Q96IV0 654 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 RUSC1Q9BVN2 902 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 CNOT8Q9UFF9 292 aaKnown RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 TRAF3IP3Q9Y228 551 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 BCS1LQ9Y276 419 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 NFS1Q9Y697 457 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 GAKO14976 1311 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 COL14A1Q05707 1796 aaKnown RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 IGKV6D-41A0A0C4DH26 115 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 SPDYE3A6NKU9 549 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 PHF20L1A8MW92 1017 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 G3V3G9 751 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 PDXKO00764 312 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 EVI5O60447 810 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 BUB1BO60566 1050 aaPredicted RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 HLA-DOAP06340 250 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 SPATA31C1P0DKV0 1188 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 NMT1P30419 496 aaKnown RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 NFIAQ12857 509 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 PLS1Q14651 629 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 QPCTQ16769 361 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 ZC2HC1CQ53FD0 456 aaPredicted RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 DCAF8Q5TAQ9 597 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 ZFPM1Q8IX07 1006 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 MYCT1Q8N699 235 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 SYT2Q8N9I0 419 aaPredicted RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 SLC35G2Q8TBE7 412 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 FBXO41Q8TF61 875 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 SLC35C1Q96A29 364 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 RBM17Q96I25 401 aaKnown RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 C8orf37Q96NL8 207 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 NAP1L4Q99733 375 aaKnown RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 JPH2Q9BR39 696 aaPredicted RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 LRRC4CQ9HCJ2 640 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 PITPNM2Q9BZ72 1349 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 CCDC188H7C350 402 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 EEF2P13639 858 aaKnown RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 PPP2R2AP63151 447 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 CTTNQ14247 550 aaKnown RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 DPY19L2P1Q6NXN4 242 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 SAMD1Q6SPF0 538 aaPredicted RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 NT5DC3Q86UY8 548 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 TPH2Q8IWU9 490 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 SYCE1Q8N0S2 351 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 CNPY4Q8N129 248 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 PRPF38AQ8NAV1 312 aaKnown RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 GLG1Q92896 1179 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 CALR3Q96L12 384 aaKnown RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 P2RX7Q99572 595 aaKnown RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 METTL14Q9HCE5 456 aaKnown RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 SWAP70Q9UH65 585 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 DDX20Q9UHI6 824 aaKnown RBP8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 PPP1R9AQ9ULJ8 1098 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 ROBO1Q9Y6N7 1651 aa8.19□□□□□ -1.1
SMARCC1-202ENST00000425518 TMEM110-MUSTN1A8MSY1 372 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms