RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 STAT5BP51692 787 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 MFSD10Q14728 455 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 KIAA0753Q2KHM9 967 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 SH3RF1Q7Z6J0 888 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 MRFAP1L1Q96HT8 127 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 EPSTI1Q96J88 318 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 GSDMAQ96QA5 445 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 RNPEPQ9H4A4 650 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 AZI2Q9H6S1 392 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 ZNF302Q9NR11 478 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 GABBR1Q9UBS5 961 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 MYH9P35579 1960 aaKnown RBP17.42■□□□□ 0.38
SHOX2-202ENST00000425436 IGKV6D-21A0A0A0MT36 114 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 MYL1P05976 194 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 SFNP31947 248 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 JAK3P52333 1124 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 DHX8Q14562 1220 aaKnown RBP17.42■□□□□ 0.38
SHOX2-202ENST00000425436 LRRC26Q2I0M4 334 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 AOPEPQ8N6M6 819 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 ERCC4Q92889 916 aaPredicted RBP17.42■□□□□ 0.38
SHOX2-202ENST00000425436 DHX58Q96C10 678 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 CCSER1Q9C0I3 900 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 SMARCAD1Q9H4L7 1026 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 SCN10AQ9Y5Y9 1956 aa17.41■□□□□ 0.38
SHOX2-202ENST00000425436 A0A0U1RQG5 324 aaPredicted RBP17.41■□□□□ 0.38
SHOX2-202ENST00000425436 BIN1O00499 593 aa17.41■□□□□ 0.38
SHOX2-202ENST00000425436 AP5Z1O43299 807 aa17.41■□□□□ 0.38
SHOX2-202ENST00000425436 UGCGQ16739 394 aa17.41■□□□□ 0.38
SHOX2-202ENST00000425436 FAM47CQ5HY64 1035 aa17.41■□□□□ 0.38
SHOX2-202ENST00000425436 PDXDC2PQ6P474 469 aa17.41■□□□□ 0.38
SHOX2-202ENST00000425436 USP49Q70CQ1 688 aa17.41■□□□□ 0.38
SHOX2-202ENST00000425436 PDILTQ8N807 584 aa17.41■□□□□ 0.38
SHOX2-202ENST00000425436 BANK1Q8NDB2 785 aa17.41■□□□□ 0.38
SHOX2-202ENST00000425436 PAGE5Q96GU1 130 aa17.41■□□□□ 0.38
SHOX2-202ENST00000425436 CUEDC2Q9H467 287 aa17.41■□□□□ 0.38
SHOX2-202ENST00000425436 MAGEF1Q9HAY2 307 aa17.41■□□□□ 0.38
SHOX2-202ENST00000425436 ERAP1Q9NZ08 941 aa17.41■□□□□ 0.38
SHOX2-202ENST00000425436 EMSYQ7Z589 1322 aa17.4■□□□□ 0.38
SHOX2-202ENST00000425436 ARVCFO00192 962 aa17.4■□□□□ 0.38
SHOX2-202ENST00000425436 HAS3O00219 553 aa17.4■□□□□ 0.38
SHOX2-202ENST00000425436 ATP4AP20648 1035 aa17.4■□□□□ 0.38
SHOX2-202ENST00000425436 UBA7P41226 1012 aa17.4■□□□□ 0.38
SHOX2-202ENST00000425436 MORC3Q14149 939 aa17.4■□□□□ 0.38
SHOX2-202ENST00000425436 FAM160B1Q5W0V3 765 aa17.4■□□□□ 0.38
SHOX2-202ENST00000425436 PLPPR4Q7Z2D5 763 aa17.4■□□□□ 0.38
SHOX2-202ENST00000425436 KATNAL1Q9BW62 490 aa17.4■□□□□ 0.38
SHOX2-202ENST00000425436 RGL1Q9NZL6 768 aa17.4■□□□□ 0.38
SHOX2-202ENST00000425436 HDAC6Q9UBN7 1215 aa17.4■□□□□ 0.38
SHOX2-202ENST00000425436 ZNF215Q9UL58 517 aaPredicted RBP17.4■□□□□ 0.38
SHOX2-202ENST00000425436 CDC25AP30304 524 aa17.39■□□□□ 0.37
SHOX2-202ENST00000425436 CDK7P50613 346 aa17.39■□□□□ 0.37
SHOX2-202ENST00000425436 FXR2P51116 673 aaKnown RBP eCLIP17.39■□□□□ 0.37
SHOX2-202ENST00000425436 MYL5Q02045 173 aa17.39■□□□□ 0.37
SHOX2-202ENST00000425436 CYP4A11Q02928 519 aa17.39■□□□□ 0.37
SHOX2-202ENST00000425436 CTTNQ14247 550 aaKnown RBP17.39■□□□□ 0.37
SHOX2-202ENST00000425436 EPHA7Q15375 998 aa17.39■□□□□ 0.37
SHOX2-202ENST00000425436 TMEM266Q2M3C6 531 aa17.39■□□□□ 0.37
SHOX2-202ENST00000425436 TRIM60Q495X7 471 aa17.39■□□□□ 0.37
SHOX2-202ENST00000425436 DRC7Q8IY82 874 aa17.39■□□□□ 0.37
SHOX2-202ENST00000425436 C7orf31Q8N865 590 aa17.39■□□□□ 0.37
SHOX2-202ENST00000425436 RDM1Q8NG50 284 aa17.39■□□□□ 0.37
SHOX2-202ENST00000425436 AFAP1L1Q8TED9 768 aa17.39■□□□□ 0.37
SHOX2-202ENST00000425436 DYDC2Q96IM9 177 aa17.39■□□□□ 0.37
SHOX2-202ENST00000425436 EIF2AK1Q9BQI3 630 aaKnown RBP17.39■□□□□ 0.37
SHOX2-202ENST00000425436 GTPBP4Q9BZE4 634 aaKnown RBP17.39■□□□□ 0.37
SHOX2-202ENST00000425436 RAB34Q9BZG1 259 aa17.39■□□□□ 0.37
SHOX2-202ENST00000425436 RRAGDQ9NQL2 400 aaPredicted RBP17.39■□□□□ 0.37
SHOX2-202ENST00000425436 MAN1B1Q9UKM7 699 aa17.39■□□□□ 0.37
SHOX2-202ENST00000425436 ATP11BQ9Y2G3 1177 aa17.39■□□□□ 0.37
SHOX2-202ENST00000425436 MAFBQ9Y5Q3 323 aaPredicted RBP17.39■□□□□ 0.37
SHOX2-202ENST00000425436 TRIP12Q14669 1992 aaPredicted RBP17.39■□□□□ 0.37
SHOX2-202ENST00000425436 KAT6AQ92794 2004 aa17.38■□□□□ 0.37
SHOX2-202ENST00000425436 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.38■□□□□ 0.37
SHOX2-202ENST00000425436 PP2D1A8MPX8 630 aa17.38■□□□□ 0.37
SHOX2-202ENST00000425436 ZNF862O60290 1169 aa17.38■□□□□ 0.37
SHOX2-202ENST00000425436 ZNF500O60304 480 aaPredicted RBP17.38■□□□□ 0.37
SHOX2-202ENST00000425436 PQBP1O60828 265 aaKnown RBP17.38■□□□□ 0.37
SHOX2-202ENST00000425436 ERCC5P28715 1186 aaPredicted RBP17.38■□□□□ 0.37
SHOX2-202ENST00000425436 HIC1Q14526 733 aa17.38■□□□□ 0.37
SHOX2-202ENST00000425436 PLCB4Q15147 1175 aa17.38■□□□□ 0.37
SHOX2-202ENST00000425436 E2F4Q16254 413 aa17.38■□□□□ 0.37
SHOX2-202ENST00000425436 SLC43A3Q8NBI5 491 aa17.38■□□□□ 0.37
SHOX2-202ENST00000425436 RMND1Q9NWS8 449 aa17.38■□□□□ 0.37
SHOX2-202ENST00000425436 LRWD1Q9UFC0 647 aa17.38■□□□□ 0.37
SHOX2-202ENST00000425436 ALPK3Q96L96 1907 aa17.38■□□□□ 0.37
SHOX2-202ENST00000425436 A0A087WWV3 80 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 GTPBP6O43824 516 aaPredicted RBP17.37■□□□□ 0.37
SHOX2-202ENST00000425436 SLITRK3O94933 977 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 SMIM10L2AP0DMW4 78 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 SMIM10L2BP0DMW5 78 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 RTP1P59025 263 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 ZNF200P98182 395 aaPredicted RBP17.37■□□□□ 0.37
SHOX2-202ENST00000425436 RRAGBQ5VZM2 374 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 NFRKBQ6P4R8 1299 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 TPH2Q8IWU9 490 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 IGSF22Q8N9C0 903 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 TRPV6Q9H1D0 765 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 TRMT13Q9NUP7 481 aaKnown RBP17.37■□□□□ 0.37
SHOX2-202ENST00000425436 SETD4Q9NVD3 440 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 WRAP73Q9P2S5 460 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms