RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 MYCLP12524 364 aaPredicted RBP18.2■□□□□ 0.5
CMTM3-202ENST00000424011 ARHGAP29Q52LW3 1261 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 ZNF569Q5MCW4 686 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 ICE2Q659A1 982 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 CDCA5Q96FF9 252 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 ACAD9Q9H845 621 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 REXO2Q9Y3B8 237 aaKnown RBP18.2■□□□□ 0.5
CMTM3-202ENST00000424011 RIPK3Q9Y572 518 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 RBBP6Q7Z6E9 1792 aaKnown RBP18.2■□□□□ 0.5
CMTM3-202ENST00000424011 SCN4AP35499 1836 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 DDX39AO00148 427 aaKnown RBP18.2■□□□□ 0.5
CMTM3-202ENST00000424011 GCNT3O95395 438 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 GUCY2CP25092 1073 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 RPL13P26373 211 aaKnown RBP18.2■□□□□ 0.5
CMTM3-202ENST00000424011 SFNP31947 248 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 JAK3P52333 1124 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 ITGB3BPQ13352 177 aaPredicted RBP18.2■□□□□ 0.5
CMTM3-202ENST00000424011 VGLL4Q14135 290 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 TMEM132BQ14DG7 1078 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 NLRX1Q86UT6 975 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 C10orf67Q8IYJ2 551 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 MYCT1Q8N699 235 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 NSUN6Q8TEA1 469 aaKnown RBP18.2■□□□□ 0.5
CMTM3-202ENST00000424011 SAMM50Q9Y512 469 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 SNCAIPQ9Y6H5 919 aa18.2■□□□□ 0.5
CMTM3-202ENST00000424011 ZRANB2O95218 330 aaKnown RBP eCLIP18.19■□□□□ 0.5
CMTM3-202ENST00000424011 IREB2P48200 963 aaKnown RBP18.19■□□□□ 0.5
CMTM3-202ENST00000424011 PSEN1P49768 467 aa18.19■□□□□ 0.5
CMTM3-202ENST00000424011 CASP5P51878 434 aa18.19■□□□□ 0.5
CMTM3-202ENST00000424011 KRT76Q01546 638 aa18.19■□□□□ 0.5
CMTM3-202ENST00000424011 MEA1Q16626 185 aa18.19■□□□□ 0.5
CMTM3-202ENST00000424011 BANK1Q8NDB2 785 aa18.19■□□□□ 0.5
CMTM3-202ENST00000424011 GPRASP2Q96D09 838 aa18.19■□□□□ 0.5
CMTM3-202ENST00000424011 TYW1Q9NV66 732 aaKnown RBP18.19■□□□□ 0.5
CMTM3-202ENST00000424011 RNF216Q9NWF9 866 aaPredicted RBP18.19■□□□□ 0.5
CMTM3-202ENST00000424011 CWC15Q9P013 229 aaKnown RBP18.19■□□□□ 0.5
CMTM3-202ENST00000424011 PKD2L1Q9P0L9 805 aa18.19■□□□□ 0.5
CMTM3-202ENST00000424011 DBR1Q9UK59 544 aaKnown RBP18.19■□□□□ 0.5
CMTM3-202ENST00000424011 UBE4BO95155 1302 aa18.19■□□□□ 0.5
CMTM3-202ENST00000424011 RSPH10B2B2RC85 870 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 STAM2O75886 525 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 LYPLA2O95372 231 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 RSPH10BP0C881 870 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 NR2F2P24468 414 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 QARSP47897 775 aaKnown RBP18.18■□□□□ 0.5
CMTM3-202ENST00000424011 ZNF131P52739 623 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 PPP2R3AQ06190 1150 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 VSIG10LQ86VR7 867 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 UBXN4Q92575 508 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 EDEM3Q9BZQ6 932 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 SIK3Q9Y2K2 1263 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.18■□□□□ 0.5
CMTM3-202ENST00000424011 TESPA1A2RU30 521 aaPredicted RBP18.18■□□□□ 0.5
CMTM3-202ENST00000424011 EFCAB8A8MWE9 144 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 SOCS7O14512 581 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 TRIM66O15016 1216 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 MYBP10242 640 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 NF2P35240 595 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 GPS2Q13227 327 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 TRIM59Q8IWR1 403 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 SLC35F6Q8N357 371 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 RDM1Q8NG50 284 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 PHIPQ8WWQ0 1821 aa18.18■□□□□ 0.5
CMTM3-202ENST00000424011 WRAP73Q9P2S5 460 aaPredicted RBP18.18■□□□□ 0.5
CMTM3-202ENST00000424011 SPDYE16A6NNV3 312 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-202ENST00000424011 NR3C2P08235 984 aa18.17■□□□□ 0.5
CMTM3-202ENST00000424011 ERCC3P19447 782 aa18.17■□□□□ 0.5
CMTM3-202ENST00000424011 CDK17Q00537 523 aa18.17■□□□□ 0.5
CMTM3-202ENST00000424011 ZSCAN26Q16670 478 aa18.17■□□□□ 0.5
CMTM3-202ENST00000424011 FRMD5Q7Z6J6 570 aa18.17■□□□□ 0.5
CMTM3-202ENST00000424011 CDHR1Q96JP9 859 aa18.17■□□□□ 0.5
CMTM3-202ENST00000424011 WDR64B1ANS9 1081 aa18.17■□□□□ 0.5
CMTM3-202ENST00000424011 PRPF6O94906 941 aaKnown RBP18.17■□□□□ 0.5
CMTM3-202ENST00000424011 FAM178BQ8IXR5 827 aa18.17■□□□□ 0.5
CMTM3-202ENST00000424011 CCDC170Q8IYT3 715 aa18.17■□□□□ 0.5
CMTM3-202ENST00000424011 CHST13Q8NET6 341 aa18.17■□□□□ 0.5
CMTM3-202ENST00000424011 MMRN2Q9H8L6 949 aa18.17■□□□□ 0.5
CMTM3-202ENST00000424011 PARP14Q460N5 1801 aa18.17■□□□□ 0.5
CMTM3-202ENST00000424011 WDR90Q96KV7 1748 aa18.17■□□□□ 0.5
CMTM3-202ENST00000424011 ZBTB39O15060 712 aa18.16■□□□□ 0.5
CMTM3-202ENST00000424011 POLR3GO15318 223 aaPredicted RBP18.16■□□□□ 0.5
CMTM3-202ENST00000424011 HERVK_113P62684 666 aa18.16■□□□□ 0.5
CMTM3-202ENST00000424011 TIPINQ9BVW5 301 aa18.16■□□□□ 0.5
CMTM3-202ENST00000424011 METTL14Q9HCE5 456 aaKnown RBP18.16■□□□□ 0.5
CMTM3-202ENST00000424011 CYP39A1Q9NYL5 469 aa18.16■□□□□ 0.5
CMTM3-202ENST00000424011 TRIM10Q9UDY6 481 aa18.16■□□□□ 0.5
CMTM3-202ENST00000424011 LCMT1Q9UIC8 334 aa18.16■□□□□ 0.5
CMTM3-202ENST00000424011 PCDHB13Q9Y5F0 798 aa18.16■□□□□ 0.5
CMTM3-202ENST00000424011 EPHB6O15197 1021 aa18.16■□□□□ 0.5
CMTM3-202ENST00000424011 SLC16A3O15427 465 aaKnown RBP18.16■□□□□ 0.5
CMTM3-202ENST00000424011 CYLC1P35663 651 aaPredicted RBP18.16■□□□□ 0.5
CMTM3-202ENST00000424011 KRT83P78385 493 aa18.16■□□□□ 0.5
CMTM3-202ENST00000424011 PLS1Q14651 629 aa18.16■□□□□ 0.5
CMTM3-202ENST00000424011 C4orf19Q8IY42 314 aa18.16■□□□□ 0.5
CMTM3-202ENST00000424011 CCDC43Q96MW1 224 aaKnown RBP18.16■□□□□ 0.5
CMTM3-202ENST00000424011 INPP4AQ96PE3 977 aaPredicted RBP18.16■□□□□ 0.5
CMTM3-202ENST00000424011 UBXN6Q9BZV1 441 aa18.16■□□□□ 0.5
CMTM3-202ENST00000424011 LOC102724159A0A0B4J2E5 919 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 IPO7O95373 1038 aaKnown RBP18.15■□□□□ 0.5
CMTM3-202ENST00000424011 HNRNPH3P31942 346 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms