RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 MAGEB2O15479 319 aa20.69■□□□□ 0.9
HDAC6-205ENST00000423941 CXCL10P02778 98 aa20.69■□□□□ 0.9
HDAC6-205ENST00000423941 RPA1P27694 616 aa20.69■□□□□ 0.9
HDAC6-205ENST00000423941 MGAT3Q09327 533 aa20.69■□□□□ 0.9
HDAC6-205ENST00000423941 PKP1Q13835 747 aa20.69■□□□□ 0.9
HDAC6-205ENST00000423941 CTTNQ14247 550 aaKnown RBP20.69■□□□□ 0.9
HDAC6-205ENST00000423941 MBTPS1Q14703 1052 aa20.69■□□□□ 0.9
HDAC6-205ENST00000423941 SF3A1Q15459 793 aaKnown RBP20.69■□□□□ 0.9
HDAC6-205ENST00000423941 TMEM266Q2M3C6 531 aa20.69■□□□□ 0.9
HDAC6-205ENST00000423941 FAM173BQ6P4H8 233 aa20.69■□□□□ 0.9
HDAC6-205ENST00000423941 DTHD1Q6ZMT9 781 aa20.69■□□□□ 0.9
HDAC6-205ENST00000423941 CATSPER3Q86XQ3 398 aa20.69■□□□□ 0.9
HDAC6-205ENST00000423941 KIAA0319LQ8IZA0 1049 aa20.69■□□□□ 0.9
HDAC6-205ENST00000423941 NME8Q8N427 588 aa20.69■□□□□ 0.9
HDAC6-205ENST00000423941 DNAJB3Q8WWF6 145 aa20.69■□□□□ 0.9
HDAC6-205ENST00000423941 UBE2OQ9C0C9 1292 aaKnown RBP20.69■□□□□ 0.9
HDAC6-205ENST00000423941 PPME1Q9Y570 386 aa20.69■□□□□ 0.9
HDAC6-205ENST00000423941 TMEM150BA6NC51 233 aa20.68■□□□□ 0.9
HDAC6-205ENST00000423941 DDX11L8A8MPP1 907 aa20.68■□□□□ 0.9
HDAC6-205ENST00000423941 CHRNA1P02708 482 aa20.68■□□□□ 0.9
HDAC6-205ENST00000423941 PFKMP08237 780 aa20.68■□□□□ 0.9
HDAC6-205ENST00000423941 THPOP40225 353 aa20.68■□□□□ 0.9
HDAC6-205ENST00000423941 CYP4A11Q02928 519 aa20.68■□□□□ 0.9
HDAC6-205ENST00000423941 TMEM240Q5SV17 173 aa20.68■□□□□ 0.9
HDAC6-205ENST00000423941 TPH2Q8IWU9 490 aa20.68■□□□□ 0.9
HDAC6-205ENST00000423941 RPUSD2Q8IZ73 545 aaKnown RBP20.68■□□□□ 0.9
HDAC6-205ENST00000423941 CLIC4Q9Y696 253 aa20.68■□□□□ 0.9
HDAC6-205ENST00000423941 LOXHD1Q8IVV2 1947 aa20.67■□□□□ 0.9
HDAC6-205ENST00000423941 RSPH10B2B2RC85 870 aa20.67■□□□□ 0.9
HDAC6-205ENST00000423941 ZBTB39O15060 712 aa20.67■□□□□ 0.9
HDAC6-205ENST00000423941 NBNO60934 754 aa20.67■□□□□ 0.9
HDAC6-205ENST00000423941 MED24O75448 989 aa20.67■□□□□ 0.9
HDAC6-205ENST00000423941 RSPH10BP0C881 870 aa20.67■□□□□ 0.9
HDAC6-205ENST00000423941 RASIP1Q5U651 963 aa20.67■□□□□ 0.9
HDAC6-205ENST00000423941 TRMT1LQ7Z2T5 733 aaKnown RBP20.67■□□□□ 0.9
HDAC6-205ENST00000423941 RAB34Q9BZG1 259 aa20.67■□□□□ 0.9
HDAC6-205ENST00000423941 CYP26B1Q9NR63 512 aa20.67■□□□□ 0.9
HDAC6-205ENST00000423941 ANKEF1Q9NU02 776 aa20.67■□□□□ 0.9
HDAC6-205ENST00000423941 LRWD1Q9UFC0 647 aa20.67■□□□□ 0.9
HDAC6-205ENST00000423941 ZDHHC9Q9Y397 364 aa20.67■□□□□ 0.9
HDAC6-205ENST00000423941 STK24Q9Y6E0 443 aa20.67■□□□□ 0.9
HDAC6-205ENST00000423941 KDM3AQ9Y4C1 1321 aa20.67■□□□□ 0.9
HDAC6-205ENST00000423941 MAFO75444 373 aaPredicted RBP20.66■□□□□ 0.9
HDAC6-205ENST00000423941 F13A1P00488 732 aa20.66■□□□□ 0.9
HDAC6-205ENST00000423941 YWHABP31946 246 aaKnown RBP20.66■□□□□ 0.9
HDAC6-205ENST00000423941 SHHQ15465 462 aa20.66■□□□□ 0.9
HDAC6-205ENST00000423941 C9orf50Q5SZB4 431 aa20.66■□□□□ 0.9
HDAC6-205ENST00000423941 OTUD6AQ7L8S5 288 aa20.66■□□□□ 0.9
HDAC6-205ENST00000423941 RSPH3Q86UC2 560 aa20.66■□□□□ 0.9
HDAC6-205ENST00000423941 TDHQ8IZJ6 230 aa20.66■□□□□ 0.9
HDAC6-205ENST00000423941 ZNF579Q8NAF0 562 aaKnown RBP20.66■□□□□ 0.9
HDAC6-205ENST00000423941 USP28Q96RU2 1077 aa20.66■□□□□ 0.9
HDAC6-205ENST00000423941 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.66■□□□□ 0.95e-7■■□□□ 13
HDAC6-205ENST00000423941 MMTAG2Q9BU76 263 aaKnown RBP20.66■□□□□ 0.9
HDAC6-205ENST00000423941 OSBPL7Q9BZF2 842 aa20.66■□□□□ 0.9
HDAC6-205ENST00000423941 FTOQ9C0B1 505 aaKnown RBP eCLIP20.66■□□□□ 0.9
HDAC6-205ENST00000423941 DHX33Q9H6R0 707 aaKnown RBP20.66■□□□□ 0.9
HDAC6-205ENST00000423941 SEPT9Q9UHD8 586 aaPredicted RBP20.66■□□□□ 0.9
HDAC6-205ENST00000423941 BRD1O95696 1058 aa20.65■□□□□ 0.9
HDAC6-205ENST00000423941 DDIT3P35638 169 aa20.65■□□□□ 0.9
HDAC6-205ENST00000423941 NASPP49321 788 aaPredicted RBP20.65■□□□□ 0.9
HDAC6-205ENST00000423941 NPEPPSP55786 919 aa20.65■□□□□ 0.9
HDAC6-205ENST00000423941 MKRN4PQ13434 485 aaPredicted RBP20.65■□□□□ 0.9
HDAC6-205ENST00000423941 ECM1Q16610 540 aa20.65■□□□□ 0.9
HDAC6-205ENST00000423941 MTERF2Q49AM1 385 aa20.65■□□□□ 0.9
HDAC6-205ENST00000423941 HYIQ5T013 277 aa20.65■□□□□ 0.9
HDAC6-205ENST00000423941 EFCAB12Q6NXP0 572 aa20.65■□□□□ 0.9
HDAC6-205ENST00000423941 ZNF365Q70YC5 407 aa20.65■□□□□ 0.9
HDAC6-205ENST00000423941 ERMNQ8TAM6 284 aa20.65■□□□□ 0.9
HDAC6-205ENST00000423941 SQORQ9Y6N5 450 aa20.65■□□□□ 0.9
HDAC6-205ENST00000423941 LAMA2P24043 3122 aaKnown RBP20.64■□□□□ 0.9
HDAC6-205ENST00000423941 FGBP02675 491 aa20.64■□□□□ 0.89
HDAC6-205ENST00000423941 ACRP10323 421 aa20.64■□□□□ 0.89
HDAC6-205ENST00000423941 MRPS6P82932 125 aaKnown RBP20.64■□□□□ 0.89
HDAC6-205ENST00000423941 TBC1D8BQ0IIM8 1120 aa20.64■□□□□ 0.89
HDAC6-205ENST00000423941 SLC39A14Q15043 492 aa20.64■□□□□ 0.89
HDAC6-205ENST00000423941 IER5Q5VY09 327 aa20.64■□□□□ 0.89
HDAC6-205ENST00000423941 HAUS3Q68CZ6 603 aa20.64■□□□□ 0.89
HDAC6-205ENST00000423941 PLA2G4FQ68DD2 849 aa20.64■□□□□ 0.89
HDAC6-205ENST00000423941 ZNF710Q8N1W2 664 aa20.64■□□□□ 0.89
HDAC6-205ENST00000423941 HERVK_113Q902F9 699 aa20.64■□□□□ 0.89
HDAC6-205ENST00000423941 SH2D3AQ9BRG2 576 aa20.64■□□□□ 0.89
HDAC6-205ENST00000423941 DBR1Q9UK59 544 aaKnown RBP20.64■□□□□ 0.89
HDAC6-205ENST00000423941 PP2D1A8MPX8 630 aa20.63■□□□□ 0.89
HDAC6-205ENST00000423941 RARRES1P49788 294 aa20.63■□□□□ 0.89
HDAC6-205ENST00000423941 PLEKHG4Q58EX7 1191 aa20.63■□□□□ 0.89
HDAC6-205ENST00000423941 ATL3Q6DD88 541 aa20.63■□□□□ 0.89
HDAC6-205ENST00000423941 PSRC1Q6PGN9 363 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-205ENST00000423941 EXOC8Q8IYI6 725 aa20.63■□□□□ 0.89
HDAC6-205ENST00000423941 KCTD17Q8N5Z5 321 aa20.63■□□□□ 0.89
HDAC6-205ENST00000423941 CEP170P1Q96L14 293 aa20.63■□□□□ 0.89
HDAC6-205ENST00000423941 AK8Q96MA6 479 aa20.63■□□□□ 0.89
HDAC6-205ENST00000423941 NACC1Q96RE7 527 aa20.63■□□□□ 0.89
HDAC6-205ENST00000423941 CELF4Q9BZC1 486 aaKnown RBP20.63■□□□□ 0.89
HDAC6-205ENST00000423941 FAM49AQ9H0Q0 323 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-205ENST00000423941 CDY2AQ9Y6F7 541 aa20.63■□□□□ 0.89
HDAC6-205ENST00000423941 VWA3AA6NCI4 1184 aa20.62■□□□□ 0.89
HDAC6-205ENST00000423941 SLC26A4O43511 780 aa20.62■□□□□ 0.89
HDAC6-205ENST00000423941 GPR32O75388 356 aa20.62■□□□□ 0.89
HDAC6-205ENST00000423941 TMOD1P28289 359 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms