RNA–Protein interactions for RNA: ENST00000422453.6

CNBP-201, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNBP, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-201ENST00000422453 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.7■□□□□ 0.12e-9■■■■■ 32.6
CNBP-201ENST00000422453 TMCO2Q7Z6W1 182 aaPredicted RBP15.7■□□□□ 0.1
CNBP-201ENST00000422453 METTL13Q8N6R0 699 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 RAD9AQ99638 391 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 PRDM12Q9H4Q4 367 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 GINS2Q9Y248 185 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 CDH23Q9H251 3354 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 TBX3O15119 743 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 MAGEB2O15479 319 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 GJB5O95377 273 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 TMOD1P28289 359 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 GUCY1B3Q02153 619 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 GNL2Q13823 731 aaKnown RBP15.7■□□□□ 0.1
CNBP-201ENST00000422453 LPIN1Q14693 890 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 FBXO47Q5MNV8 452 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 TSHZ1Q6ZSZ6 1077 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 USP38Q8NB14 1042 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 CELF4Q9BZC1 486 aaKnown RBP15.7■□□□□ 0.1
CNBP-201ENST00000422453 OSBPL7Q9BZF2 842 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 KCNMB3Q9NPA1 279 aa15.7■□□□□ 0.1
CNBP-201ENST00000422453 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
CNBP-201ENST00000422453 GBF1Q92538 1859 aa15.69■□□□□ 0.1
CNBP-201ENST00000422453 FAM205CA6NFA0 338 aa15.69■□□□□ 0.1
CNBP-201ENST00000422453 ZBTB42B2RXF5 422 aa15.69■□□□□ 0.1
CNBP-201ENST00000422453 ZNF862O60290 1169 aa15.69■□□□□ 0.1
CNBP-201ENST00000422453 NBR1Q14596 966 aa15.69■□□□□ 0.1
CNBP-201ENST00000422453 SLFN12Q8IYM2 578 aa15.69■□□□□ 0.1
CNBP-201ENST00000422453 TNFRSF25Q93038 417 aa15.69■□□□□ 0.1
CNBP-201ENST00000422453 SQORQ9Y6N5 450 aa15.69■□□□□ 0.1
CNBP-201ENST00000422453 DKC1O60832 514 aaKnown RBP eCLIP15.68■□□□□ 0.1
CNBP-201ENST00000422453 UPP2O95045 317 aa15.68■□□□□ 0.1
CNBP-201ENST00000422453 C22orf31O95567 290 aa15.68■□□□□ 0.1
CNBP-201ENST00000422453 IGFBP4P22692 258 aa15.68■□□□□ 0.1
CNBP-201ENST00000422453 PPP2R5CQ13362 524 aa15.68■□□□□ 0.1
CNBP-201ENST00000422453 UGCGQ16739 394 aa15.68■□□□□ 0.1
CNBP-201ENST00000422453 KIAA0319LQ8IZA0 1049 aa15.68■□□□□ 0.1
CNBP-201ENST00000422453 MAFAQ8NHW3 353 aaPredicted RBP15.68■□□□□ 0.1
CNBP-201ENST00000422453 MAP7D2Q96T17 732 aa15.68■□□□□ 0.1
CNBP-201ENST00000422453 SEPT9Q9UHD8 586 aaPredicted RBP15.68■□□□□ 0.1
CNBP-201ENST00000422453 KIF3AQ9Y496 699 aa15.68■□□□□ 0.1
CNBP-201ENST00000422453 INSL6Q9Y581 213 aa15.68■□□□□ 0.1
CNBP-201ENST00000422453 MYO9BQ13459 2157 aa15.68■□□□□ 0.1
CNBP-201ENST00000422453 CD52P31358 61 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 PSMC5P62195 406 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 TBC1D8BQ0IIM8 1120 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 PAK2Q13177 524 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 CALCRLQ16602 461 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 XKR3Q5GH77 459 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 EFCAB12Q6NXP0 572 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 B3GNT9Q6UX72 402 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 SLC17A8Q8NDX2 589 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 CERS4Q9HA82 394 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 AKT3Q9Y243 479 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 KDM3AQ9Y4C1 1321 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 DDX11L8A8MPP1 907 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 RBAK-RBAKDNI3L0D1 243 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 ATP2B1P20020 1258 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 MCM2P49736 904 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 TAP1Q03518 808 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 ODR4Q5SWX8 454 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 NCAPH2Q6IBW4 605 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 BANK1Q8NDB2 785 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 FBXO18Q8NFZ0 1043 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 ARNTL2Q8WYA1 636 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 HAS1Q92839 578 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 TOP1MTQ969P6 601 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 TBC1D32Q96NH3 1257 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 YME1L1Q96TA2 773 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 FTHL17Q9BXU8 183 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 AGO3Q9H9G7 860 aaKnown RBP15.67■□□□□ 0.1
CNBP-201ENST00000422453 SUGCTQ9HAC7 445 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 VAV3Q9UKW4 847 aa15.67■□□□□ 0.1
CNBP-201ENST00000422453 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.66■□□□□ 0.1
CNBP-201ENST00000422453 EML1O00423 815 aa15.66■□□□□ 0.1
CNBP-201ENST00000422453 NEMFO60524 1076 aa15.66■□□□□ 0.1
CNBP-201ENST00000422453 P4HBP07237 508 aaKnown RBP15.66■□□□□ 0.1
CNBP-201ENST00000422453 QARSP47897 775 aaKnown RBP15.66■□□□□ 0.1
CNBP-201ENST00000422453 CLCN3P51790 818 aa15.66■□□□□ 0.1
CNBP-201ENST00000422453 NFX1Q12986 1120 aaKnown RBP15.66■□□□□ 0.1
CNBP-201ENST00000422453 MKRN4PQ13434 485 aaPredicted RBP15.66■□□□□ 0.1
CNBP-201ENST00000422453 MTERF2Q49AM1 385 aa15.66■□□□□ 0.1
CNBP-201ENST00000422453 PPP1R16BQ96T49 567 aa15.66■□□□□ 0.1
CNBP-201ENST00000422453 FOXP1Q9H334 677 aaPredicted RBP15.66■□□□□ 0.1
CNBP-201ENST00000422453 PADI3Q9ULW8 664 aa15.66■□□□□ 0.1
CNBP-201ENST00000422453 PCDHA12Q9UN75 941 aa15.66■□□□□ 0.1
CNBP-201ENST00000422453 CHD9Q3L8U1 2897 aa15.65■□□□□ 0.1
CNBP-201ENST00000422453 MICAL3Q7RTP6 2002 aa15.65■□□□□ 0.1
CNBP-201ENST00000422453 LCHNA4D1U4 455 aa15.65■□□□□ 0.1
CNBP-201ENST00000422453 RPS6KA5O75582 802 aa15.65■□□□□ 0.1
CNBP-201ENST00000422453 VTNP04004 478 aa15.65■□□□□ 0.1
CNBP-201ENST00000422453 CRYBB1P53674 252 aaPredicted RBP15.65■□□□□ 0.1
CNBP-201ENST00000422453 EPHA7Q15375 998 aa15.65■□□□□ 0.1
CNBP-201ENST00000422453 KIZQ2M2Z5 673 aa15.65■□□□□ 0.1
CNBP-201ENST00000422453 ZNF710Q8N1W2 664 aa15.65■□□□□ 0.1
CNBP-201ENST00000422453 LRRC71Q8N4P6 559 aa15.65■□□□□ 0.1
CNBP-201ENST00000422453 NIFKQ9BYG3 293 aaKnown RBP15.65■□□□□ 0.1
CNBP-201ENST00000422453 EVPLQ92817 2033 aa15.64■□□□□ 0.09
CNBP-201ENST00000422453 ENPP3O14638 875 aa15.64■□□□□ 0.09
CNBP-201ENST00000422453 MCM7P33993 719 aa15.64■□□□□ 0.09
CNBP-201ENST00000422453 DNM2P50570 870 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms