RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 STK3Q13188 491 aa12.87□□□□□ -0.35
NDUFA3-208ENST00000422029 CAMK1Q14012 370 aa12.87□□□□□ -0.35
NDUFA3-208ENST00000422029 TIGD5Q53EQ6 642 aa12.87□□□□□ -0.35
NDUFA3-208ENST00000422029 SPOUT1Q5T280 376 aaKnown RBP12.87□□□□□ -0.35
NDUFA3-208ENST00000422029 FAM102BQ5T8I3 360 aa12.87□□□□□ -0.35
NDUFA3-208ENST00000422029 ADGRD2Q7Z7M1 963 aa12.87□□□□□ -0.35
NDUFA3-208ENST00000422029 REXO1Q8N1G1 1221 aaKnown RBP12.87□□□□□ -0.35
NDUFA3-208ENST00000422029 KLHL23Q8NBE8 558 aa12.87□□□□□ -0.35
NDUFA3-208ENST00000422029 NEK9Q8TD19 979 aa12.87□□□□□ -0.35
NDUFA3-208ENST00000422029 OSMRQ99650 979 aa12.87□□□□□ -0.35
NDUFA3-208ENST00000422029 ADAM2Q99965 735 aa12.87□□□□□ -0.35
NDUFA3-208ENST00000422029 SH2D3AQ9BRG2 576 aa12.87□□□□□ -0.35
NDUFA3-208ENST00000422029 C11orf84Q9BUA3 381 aaPredicted RBP12.87□□□□□ -0.35
NDUFA3-208ENST00000422029 PLAGL2Q9UPG8 496 aa12.87□□□□□ -0.35
NDUFA3-208ENST00000422029 IGSF9BQ9UPX0 1349 aa12.87□□□□□ -0.35
NDUFA3-208ENST00000422029 COL4A6Q14031 1691 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 TMEM150BA6NC51 233 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 TBKBP1A7MCY6 615 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 EDIL3O43854 480 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 RPS6KA5O75582 802 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 ITGB1P05556 798 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 HMGB1P09429 215 aaKnown RBP12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 FGFR1P11362 822 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 FGFR4P22455 802 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 PDIA3P30101 505 aaKnown RBP12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 RBM10P98175 930 aaKnown RBP12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 UGCGQ16739 394 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 TMEM31Q5JXX7 168 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 NPAS4Q8IUM7 802 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 LRRC71Q8N4P6 559 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 CRYGNQ8WXF5 182 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 KCNB2Q92953 911 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 PABPC5Q96DU9 382 aaKnown RBP12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 AIFM3Q96NN9 605 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 UPF3BQ9BZI7 483 aaKnown RBP12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 ZMYND12Q9H0C1 365 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 ERVK-5Q9HDB9 667 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 TCEAL9Q9UHQ7 104 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 ST3GAL5Q9UNP4 418 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 EVPLQ92817 2033 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 ATG2AQ2TAZ0 1938 aa12.86□□□□□ -0.35
NDUFA3-208ENST00000422029 TTC3P53804 2025 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 CCDC196A0A1B0GTZ2 297 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 DENND3A2RUS2 1198 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 hCG_1984214I3L0E3 225 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 PER2O15055 1255 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 CSDE1O75534 798 aaKnown RBP12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 C22orf31O95567 290 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 RB1P06400 928 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 CYP3A4P08684 503 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 NLRP5P59047 1200 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 NTRK3Q16288 839 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 ZNF484Q5JVG2 852 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 NIPA1Q7RTP0 329 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 CRIPAKQ8N1N5 446 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 ZNF713Q8N859 430 aaPredicted RBP12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 RNF169Q8NCN4 708 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 SPPL3Q8TCT6 385 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 MICAL1Q8TDZ2 1067 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 CLP1Q92989 425 aaKnown RBP12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 PCDHB7Q9Y5E2 793 aa12.85□□□□□ -0.35
NDUFA3-208ENST00000422029 C5orf67F2Z3F1 127 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 PI4K2BG5E9Z4 385 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 MSH4O15457 936 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 ZNF862O60290 1169 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 TBX10O75333 385 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 PSAPP07602 524 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 STAG3L1P0CL83 205 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 PBX3P40426 434 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 NRIP1P48552 1158 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 NLRP11P59045 1033 aaKnown RBP12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 TOB2Q14106 344 aaPredicted RBP12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 EFCAB12Q6NXP0 572 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 FAM228AQ86W67 206 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 CMTR2Q8IYT2 770 aaKnown RBP12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 NME8Q8N427 588 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 POF1BQ8WVV4 589 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 TNPO1Q92973 898 aaKnown RBP12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 FTHL17Q9BXU8 183 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 GLT8D2Q9H1C3 349 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 AKT3Q9Y243 479 aa12.84□□□□□ -0.35
NDUFA3-208ENST00000422029 KIAA1671Q9BY89 1806 aa12.83□□□□□ -0.35
NDUFA3-208ENST00000422029 ESYT2A0FGR8 921 aa12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 GPR32O75388 356 aa12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 TDP2O95551 362 aa12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 GNA11P29992 359 aa12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 SARSP49591 514 aaKnown RBP12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 NDUFV1P49821 464 aa12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 SLC26A2P50443 739 aa12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 LONRF3Q496Y0 759 aa12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 ZNF746Q6NUN9 644 aaPredicted RBP12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 TBCKQ8TEA7 893 aa12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 LENG9Q96B70 501 aa12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 APOL5Q9BWW9 433 aa12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 UNC45AQ9H3U1 944 aa12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 GJB4Q9NTQ9 266 aa12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 TBC1D22BQ9NU19 505 aa12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 TYW1Q9NV66 732 aaKnown RBP12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 PCDHA10Q9Y5I2 948 aa12.83□□□□□ -0.36
NDUFA3-208ENST00000422029 MAFBQ9Y5Q3 323 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms