RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 CLIC4Q9Y696 253 aa21.67■■□□□ 1.06
GCDH-202ENST00000421816 EVPLQ92817 2033 aa21.67■■□□□ 1.06
GCDH-202ENST00000421816 SIP14410 1827 aa21.66■■□□□ 1.06
GCDH-202ENST00000421816 MAGEB2O15479 319 aa21.66■■□□□ 1.06
GCDH-202ENST00000421816 PARNO95453 639 aaKnown RBP21.66■■□□□ 1.06
GCDH-202ENST00000421816 F13A1P00488 732 aa21.66■■□□□ 1.06
GCDH-202ENST00000421816 GPNMBQ14956 572 aa21.66■■□□□ 1.06
GCDH-202ENST00000421816 PTPAQ15257 358 aa21.66■■□□□ 1.06
GCDH-202ENST00000421816 C16orf59Q7L2K0 433 aa21.66■■□□□ 1.06
GCDH-202ENST00000421816 CATSPER3Q86XQ3 398 aa21.66■■□□□ 1.06
GCDH-202ENST00000421816 ERMNQ8TAM6 284 aa21.66■■□□□ 1.06
GCDH-202ENST00000421816 DNAJB3Q8WWF6 145 aa21.66■■□□□ 1.06
GCDH-202ENST00000421816 RAB34Q9BZG1 259 aa21.66■■□□□ 1.06
GCDH-202ENST00000421816 FTOQ9C0B1 505 aaKnown RBP eCLIP21.66■■□□□ 1.06
GCDH-202ENST00000421816 IL23AQ9NPF7 189 aa21.66■■□□□ 1.06
GCDH-202ENST00000421816 MED24O75448 989 aa21.65■■□□□ 1.06
GCDH-202ENST00000421816 RPA1P27694 616 aa21.65■■□□□ 1.06
GCDH-202ENST00000421816 YWHABP31946 246 aaKnown RBP21.65■■□□□ 1.06
GCDH-202ENST00000421816 RSPH3Q86UC2 560 aa21.65■■□□□ 1.06
GCDH-202ENST00000421816 LINC01465Q8N7H1 131 aa21.65■■□□□ 1.06
GCDH-202ENST00000421816 STK24Q9Y6E0 443 aa21.65■■□□□ 1.06
GCDH-202ENST00000421816 RSPH10B2B2RC85 870 aa21.64■■□□□ 1.05
GCDH-202ENST00000421816 RSPH10BP0C881 870 aa21.64■■□□□ 1.05
GCDH-202ENST00000421816 MUTP22033 750 aa21.64■■□□□ 1.05
GCDH-202ENST00000421816 MGAT3Q09327 533 aa21.64■■□□□ 1.05
GCDH-202ENST00000421816 MBTPS1Q14703 1052 aa21.64■■□□□ 1.05
GCDH-202ENST00000421816 MTERF2Q49AM1 385 aa21.64■■□□□ 1.05
GCDH-202ENST00000421816 FOXD4L5Q5VV16 416 aaPredicted RBP21.64■■□□□ 1.05
GCDH-202ENST00000421816 PLA2G4FQ68DD2 849 aa21.64■■□□□ 1.05
GCDH-202ENST00000421816 OTUD6AQ7L8S5 288 aa21.64■■□□□ 1.05
GCDH-202ENST00000421816 RPUSD2Q8IZ73 545 aaKnown RBP21.64■■□□□ 1.05
GCDH-202ENST00000421816 KIAA0319LQ8IZA0 1049 aa21.64■■□□□ 1.05
GCDH-202ENST00000421816 NME8Q8N427 588 aa21.64■■□□□ 1.05
GCDH-202ENST00000421816 FOXD4L4Q8WXT5 416 aaPredicted RBP21.64■■□□□ 1.05
GCDH-202ENST00000421816 USP28Q96RU2 1077 aa21.64■■□□□ 1.05
GCDH-202ENST00000421816 FAM49AQ9H0Q0 323 aaPredicted RBP21.64■■□□□ 1.05
GCDH-202ENST00000421816 CYP26B1Q9NR63 512 aa21.64■■□□□ 1.05
GCDH-202ENST00000421816 PPME1Q9Y570 386 aa21.64■■□□□ 1.05
GCDH-202ENST00000421816 MORC2Q9Y6X9 1032 aaPredicted RBP21.64■■□□□ 1.05
GCDH-202ENST00000421816 IGKV6-21A0A0C4DH24 114 aa21.63■■□□□ 1.05
GCDH-202ENST00000421816 A0A1W2PPC1 479 aa21.63■■□□□ 1.05
GCDH-202ENST00000421816 VWA3AA6NCI4 1184 aa21.63■■□□□ 1.05
GCDH-202ENST00000421816 ZBTB39O15060 712 aa21.63■■□□□ 1.05
GCDH-202ENST00000421816 NBNO60934 754 aa21.63■■□□□ 1.05
GCDH-202ENST00000421816 BRD1O95696 1058 aa21.63■■□□□ 1.05
GCDH-202ENST00000421816 CXCL10P02778 98 aa21.63■■□□□ 1.05
GCDH-202ENST00000421816 PFKMP08237 780 aa21.63■■□□□ 1.05
GCDH-202ENST00000421816 XRCC6P12956 609 aaKnown RBP eCLIP21.63■■□□□ 1.05
GCDH-202ENST00000421816 NPEPPSP55786 919 aa21.63■■□□□ 1.05
GCDH-202ENST00000421816 TBC1D8BQ0IIM8 1120 aa21.63■■□□□ 1.05
GCDH-202ENST00000421816 HAUS3Q68CZ6 603 aa21.63■■□□□ 1.05
GCDH-202ENST00000421816 ZNF579Q8NAF0 562 aaKnown RBP21.63■■□□□ 1.05
GCDH-202ENST00000421816 SH2D3AQ9BRG2 576 aa21.63■■□□□ 1.05
GCDH-202ENST00000421816 ANKEF1Q9NU02 776 aa21.63■■□□□ 1.05
GCDH-202ENST00000421816 ZDHHC9Q9Y397 364 aa21.63■■□□□ 1.05
GCDH-202ENST00000421816 PP2D1A8MPX8 630 aa21.62■■□□□ 1.05
GCDH-202ENST00000421816 MAFO75444 373 aaPredicted RBP21.62■■□□□ 1.05
GCDH-202ENST00000421816 CHRNA1P02708 482 aa21.62■■□□□ 1.05
GCDH-202ENST00000421816 CTSHP09668 335 aa21.62■■□□□ 1.05
GCDH-202ENST00000421816 ACRP10323 421 aa21.62■■□□□ 1.05
GCDH-202ENST00000421816 NASPP49321 788 aaPredicted RBP21.62■■□□□ 1.05
GCDH-202ENST00000421816 MRPS6P82932 125 aaKnown RBP21.62■■□□□ 1.05
GCDH-202ENST00000421816 TMEM240Q5SV17 173 aa21.62■■□□□ 1.05
GCDH-202ENST00000421816 EFCAB12Q6NXP0 572 aa21.62■■□□□ 1.05
GCDH-202ENST00000421816 PSRC1Q6PGN9 363 aaPredicted RBP21.62■■□□□ 1.05
GCDH-202ENST00000421816 CEP170P1Q96L14 293 aa21.62■■□□□ 1.05
GCDH-202ENST00000421816 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.62■■□□□ 1.055e-7■■■□□ 15.5
GCDH-202ENST00000421816 MMTAG2Q9BU76 263 aaKnown RBP21.62■■□□□ 1.05
GCDH-202ENST00000421816 TET1Q8NFU7 2136 aa21.61■■□□□ 1.05
GCDH-202ENST00000421816 CCT6AP40227 531 aaKnown RBP21.61■■□□□ 1.05
GCDH-202ENST00000421816 SLC39A14Q15043 492 aa21.61■■□□□ 1.05
GCDH-202ENST00000421816 SHHQ15465 462 aa21.61■■□□□ 1.05
GCDH-202ENST00000421816 ECM1Q16610 540 aa21.61■■□□□ 1.05
GCDH-202ENST00000421816 XKR9Q5GH70 373 aa21.61■■□□□ 1.05
GCDH-202ENST00000421816 C9orf50Q5SZB4 431 aa21.61■■□□□ 1.05
GCDH-202ENST00000421816 ZNF365Q70YC5 407 aa21.61■■□□□ 1.05
GCDH-202ENST00000421816 DEFB128Q7Z7B8 93 aa21.61■■□□□ 1.05
GCDH-202ENST00000421816 TDHQ8IZJ6 230 aa21.61■■□□□ 1.05
GCDH-202ENST00000421816 METTL13Q8N6R0 699 aa21.61■■□□□ 1.05
GCDH-202ENST00000421816 SNX29Q8TEQ0 813 aa21.61■■□□□ 1.05
GCDH-202ENST00000421816 AK8Q96MA6 479 aa21.61■■□□□ 1.05
GCDH-202ENST00000421816 ZNF396Q96N95 335 aaPredicted RBP21.61■■□□□ 1.05
GCDH-202ENST00000421816 NACC1Q96RE7 527 aa21.61■■□□□ 1.05
GCDH-202ENST00000421816 DHX33Q9H6R0 707 aaKnown RBP21.61■■□□□ 1.05
GCDH-202ENST00000421816 CDY2AQ9Y6F7 541 aa21.61■■□□□ 1.05
GCDH-202ENST00000421816 KDM3AQ9Y4C1 1321 aa21.6■■□□□ 1.05
GCDH-202ENST00000421816 TMOD1P28289 359 aa21.6■■□□□ 1.05
GCDH-202ENST00000421816 CDC25AP30304 524 aa21.6■■□□□ 1.05
GCDH-202ENST00000421816 RFC5P40937 340 aa21.6■■□□□ 1.05
GCDH-202ENST00000421816 CLCN3P51790 818 aa21.6■■□□□ 1.05
GCDH-202ENST00000421816 CEBPZQ03701 1054 aaKnown RBP21.6■■□□□ 1.05
GCDH-202ENST00000421816 GRIN1Q05586 938 aa21.6■■□□□ 1.05
GCDH-202ENST00000421816 MKRN4PQ13434 485 aaPredicted RBP21.6■■□□□ 1.05
GCDH-202ENST00000421816 IER5Q5VY09 327 aa21.6■■□□□ 1.05
GCDH-202ENST00000421816 KRT79Q5XKE5 535 aa21.6■■□□□ 1.05
GCDH-202ENST00000421816 POTEGQ6S5H5 508 aa21.6■■□□□ 1.05
GCDH-202ENST00000421816 EXOC8Q8IYI6 725 aa21.6■■□□□ 1.05
GCDH-202ENST00000421816 LRRC71Q8N4P6 559 aa21.6■■□□□ 1.05
GCDH-202ENST00000421816 PIGOQ8TEQ8 1089 aa21.6■■□□□ 1.05
GCDH-202ENST00000421816 OSBPL7Q9BZF2 842 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms