RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 COPS5Q92905 334 aa8.67□□□□□ -1.02
AC012560.1-202ENST00000421324 MTG1Q9BT17 334 aaPredicted RBP8.67□□□□□ -1.02
AC012560.1-202ENST00000421324 AGXT2Q9BYV1 514 aa8.67□□□□□ -1.02
AC012560.1-202ENST00000421324 GLT8D2Q9H1C3 349 aa8.67□□□□□ -1.02
AC012560.1-202ENST00000421324 RUBCNLQ9H714 662 aa8.67□□□□□ -1.02
AC012560.1-202ENST00000421324 EHMT1Q9H9B1 1298 aa8.67□□□□□ -1.02
AC012560.1-202ENST00000421324 PDRG1Q9NUG6 133 aa8.67□□□□□ -1.02
AC012560.1-202ENST00000421324 DDX41Q9UJV9 622 aaKnown RBP8.67□□□□□ -1.02
AC012560.1-202ENST00000421324 CEP290O15078 2479 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 MYH6P13533 1939 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 FRMPD3Q5JV73 1810 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 CNTNAP5Q8WYK1 1306 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 TRIM43BA6NCK2 446 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 SMCO2A6NFE2 343 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 MEIS2O14770 477 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 KIAA0355O15063 1070 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 PRPF3O43395 683 aaKnown RBP8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 ARHGEF15O94989 841 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 ARIH2O95376 493 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 FOSP01100 380 aaPredicted RBP8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 SUPT20HL2P0C7V6 817 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 PDIA3P30101 505 aaKnown RBP8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 ATP1A2P50993 1020 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 ADCY7P51828 1080 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 EVCP57679 992 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 CHMP4BP1P59074 171 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 ANAPC15P60006 121 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 PSMC6P62333 389 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 CCT2P78371 535 aaKnown RBP8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 PURAQ00577 322 aaKnown RBP8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 ARHGAP1Q07960 439 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 FAAP100Q0VG06 881 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 DGKDQ16760 1214 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 PCNX4Q63HM2 1172 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 WWC2Q6AWC2 1192 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 CPLX2Q6PUV4 134 aaKnown RBP8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 NLRX1Q86UT6 975 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 SLC43A3Q8NBI5 491 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 TPCN2Q8NHX9 752 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 IL31RAQ8NI17 732 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 C1orf216Q8TAB5 229 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 CCDC12Q8WUD4 166 aaPredicted RBP8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 AFG1LQ8WV93 481 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 TRIM43Q96BQ3 446 aaPredicted RBP8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 ZNF274Q96GC6 653 aaPredicted RBP8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 CALR3Q96L12 384 aaKnown RBP8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 UPF3BQ9BZI7 483 aaKnown RBP8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 PPP1R12CQ9BZL4 782 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 PRO3102Q9H379 93 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 MLXIPQ9HAP2 919 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 RIC8AQ9NPQ8 531 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 PDLIM7Q9NR12 457 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 DNAAF2Q9NVR5 837 aaKnown RBP8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 BARHL2Q9NY43 387 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 RTEL1Q9NZ71 1219 aa8.66□□□□□ -1.02
AC012560.1-202ENST00000421324 CPLX1O14810 134 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 FIBPO43427 364 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 PPFIA4O75335 1185 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 SCG2P13521 617 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 TOB2Q14106 344 aaPredicted RBP8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 NEDD9Q14511 834 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 ANKRD1Q15327 319 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 UBE2SQ16763 222 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 PFKFB3Q16875 520 aaPredicted RBP8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 FAM47CQ5HY64 1035 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 CELF3Q5SZQ8 465 aaKnown RBP8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 MCTP2Q6DN12 878 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 LYPD4Q6UWN0 246 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 TDHQ8IZJ6 230 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 SIX5Q8N196 739 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 PPTC7Q8NI37 304 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 ZDHHC1Q8WTX9 485 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 BADQ92934 168 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 SPATA33Q96N06 139 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 C6orf50Q9HD87 102 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 NDFIP2Q9NV92 336 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 PCDHA6Q9UN73 950 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 PCDHA8Q9Y5H6 950 aa8.65□□□□□ -1.02
AC012560.1-202ENST00000421324 BRCA2P51587 3418 aa8.65□□□□□ -1.03
AC012560.1-202ENST00000421324 TNRC18O15417 2968 aaPredicted RBP8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 LCTP09848 1927 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 GRIN2DO15399 1336 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 FRMPD4Q14CM0 1322 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 STXBP3O00186 592 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 MAFGO15525 162 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 GGPS1O95749 300 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 TIMP1P01033 207 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 CD4P01730 458 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 MMP3P08254 477 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 IFNAR1P17181 557 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 GNA11P29992 359 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 ICAM3P32942 547 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 MRPS9P82933 396 aaKnown RBP8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 FPGSQ05932 587 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 PTPN11Q06124 597 aaPredicted RBP8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 SSRP1Q08945 709 aaKnown RBP8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 NFRKBQ6P4R8 1299 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 FAM126BQ8IXS8 530 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 TMEM199Q8N511 208 aa8.64□□□□□ -1.03
AC012560.1-202ENST00000421324 GIMAP8Q8ND71 665 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms