RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ZMYM2Q9UBW7 1377 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 ARHGEF35A5YM69 484 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 EFCAB8A8MWE9 144 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 IPO7O95373 1038 aaKnown RBP9.67□□□□□ -0.86
SNCA-206ENST00000420646 CCNE2O96020 404 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 TRIM49P0CI25 452 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 TRIM49CP0CI26 452 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 CYLC1P35663 651 aaPredicted RBP9.67□□□□□ -0.86
SNCA-206ENST00000420646 CHMP4BP1P59074 171 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 ARHGEF16Q5VV41 709 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 PADI6Q6TGC4 694 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 B3GNT9Q6UX72 402 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 NACC1Q96RE7 527 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.67□□□□□ -0.86
SNCA-206ENST00000420646 PARD6BQ9BYG5 372 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 AGO4Q9HCK5 861 aaKnown RBP9.67□□□□□ -0.86
SNCA-206ENST00000420646 TUFT1Q9NNX1 390 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 ADAMTS1Q9UHI8 967 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 USP20Q9Y2K6 914 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 PCDHA13Q9Y5I0 950 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 EIF3CLB5ME19 914 aaKnown RBP9.67□□□□□ -0.86
SNCA-206ENST00000420646 H2AFXP16104 143 aaPredicted RBP9.67□□□□□ -0.86
SNCA-206ENST00000420646 RPS12P25398 132 aaKnown RBP9.67□□□□□ -0.86
SNCA-206ENST00000420646 TMEM132BQ14DG7 1078 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 SPA17Q15506 151 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 PDXDC1Q6P996 788 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 MOB2Q70IA6 237 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 ZNF720Q7Z2F6 126 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 MTERF4Q7Z6M4 381 aaKnown RBP9.67□□□□□ -0.86
SNCA-206ENST00000420646 SCYL3Q8IZE3 742 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 CEP63Q96MT8 703 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 EIF3CQ99613 913 aaKnown RBP9.67□□□□□ -0.86
SNCA-206ENST00000420646 PACSIN1Q9BY11 444 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 GTPBP4Q9BZE4 634 aaKnown RBP9.67□□□□□ -0.86
SNCA-206ENST00000420646 SUGCTQ9HAC7 445 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 TRAF3IP3Q9Y228 551 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 FHOD1Q9Y613 1164 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 A0A1W2PQJ5 194 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 NCK2O43639 380 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 XRCC5P13010 732 aaKnown RBP9.67□□□□□ -0.86
SNCA-206ENST00000420646 MAPK7Q13164 816 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 EPHA7Q15375 998 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 FIGNQ5HY92 759 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 RSRC2Q7L4I2 434 aaKnown RBP9.67□□□□□ -0.86
SNCA-206ENST00000420646 FAM84AQ96KN4 292 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 PDCD2LQ9BRP1 358 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 HAUS4Q9H6D7 363 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 EHD2Q9NZN4 543 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 MYO6Q9UM54 1294 aa9.67□□□□□ -0.86
SNCA-206ENST00000420646 ZBED4O75132 1171 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 ZMYND10O75800 440 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 KRT83P78385 493 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 KIF5AQ12840 1032 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 TRAF1Q13077 416 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 SLC35C1Q96A29 364 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 KLRG1Q96E93 195 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 PNKPQ96T60 521 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 MMS19Q96T76 1030 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 JADE2Q9NQC1 790 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 PXMP2Q9NR77 195 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 GPRC5DQ9NZD1 345 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 A0A087X0T9 212 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 PDXKO00764 312 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 KRT86O43790 486 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 FAM228BP0C875 321 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 PON1P27169 355 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 NAP1L1P55209 391 aaKnown RBP9.66□□□□□ -0.86
SNCA-206ENST00000420646 AMPD2Q01433 879 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 EDRF1Q3B7T1 1238 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 SRGAP1Q7Z6B7 1085 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 RBM46Q8TBY0 533 aaKnown RBP9.66□□□□□ -0.86
SNCA-206ENST00000420646 GOLPH3Q9H4A6 298 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 EHMT1Q9H9B1 1298 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 TYW1Q9NV66 732 aaKnown RBP9.66□□□□□ -0.86
SNCA-206ENST00000420646 ZNF214Q9UL59 606 aaPredicted RBP9.66□□□□□ -0.86
SNCA-206ENST00000420646 CD2APQ9Y5K6 639 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 UBIAD1Q9Y5Z9 338 aa9.66□□□□□ -0.86
SNCA-206ENST00000420646 RPTORQ8N122 1335 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 ADM5C9JUS6 153 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 PDE2AO00408 941 aaPredicted RBP9.65□□□□□ -0.86
SNCA-206ENST00000420646 BACH1O14867 736 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 RGS20O76081 388 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 MAGEA1P43355 309 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 RARRES1P49788 294 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 VAV2P52735 878 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 DLG4P78352 724 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 SETQ01105 290 aaPredicted RBP9.65□□□□□ -0.86
SNCA-206ENST00000420646 CBWD6Q4V339 395 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 CBWD3Q5JTY5 395 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 CBWD5Q5RIA9 395 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 TREML2Q5T2D2 321 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 SFMBT2Q5VUG0 894 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 PCNX4Q63HM2 1172 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 MCF2L2Q86YR7 1114 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 CCDC170Q8IYT3 715 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 SYCP3Q8IZU3 236 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 PLEKHA4Q9H4M7 779 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 OLFML3Q9NRN5 406 aa9.65□□□□□ -0.86
SNCA-206ENST00000420646 DDX41Q9UJV9 622 aaKnown RBP9.65□□□□□ -0.86
SNCA-206ENST00000420646 K7ENM7 598 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms