RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 M0QZ92 97 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 FAM86B2P0C5J1 330 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 SARSP49591 514 aaKnown RBP14.7□□□□□ -0.06
LINC00339-203ENST00000420503 NAPAP54920 295 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 VCPP55072 806 aaKnown RBP14.7□□□□□ -0.06
LINC00339-203ENST00000420503 COASYQ13057 564 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 KIZQ2M2Z5 673 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 TRIM67Q6ZTA4 783 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 FAM228AQ86W67 206 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 FEZF2Q8TBJ5 459 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 TMEM87BQ96K49 555 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 POP1Q99575 1024 aaKnown RBP14.7□□□□□ -0.06
LINC00339-203ENST00000420503 OSMRQ99650 979 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 ADAM2Q99965 735 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 SDF4Q9BRK5 362 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 FTHL17Q9BXU8 183 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 RNF19AQ9NV58 838 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 FAM86C1Q9NVL1 165 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 LRFN2Q9ULH4 789 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 NFASCO94856 1347 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 KDM3AQ9Y4C1 1321 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 IGKV6D-21A0A0A0MT36 114 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 C9IYK1 514 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 FGF18O76093 207 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 ATG7O95352 703 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 PDGFBP01127 241 aaPredicted RBP14.69□□□□□ -0.06
LINC00339-203ENST00000420503 VTNP04004 478 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 STAG3L1P0CL83 205 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 LIFRP42702 1097 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 ZXDAP98168 799 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 TCF15Q12870 199 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 NECTIN1Q15223 517 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 CEP55Q53EZ4 464 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 SPOUT1Q5T280 376 aaKnown RBP14.69□□□□□ -0.06
LINC00339-203ENST00000420503 ABHD15Q6UXT9 468 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 LRRC55Q6ZSA7 311 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 PLPPR4Q7Z2D5 763 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 COLGALT1Q8NBJ5 622 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 MICAL1Q8TDZ2 1067 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 ATP8B4Q8TF62 1192 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 PBXIP1Q96AQ6 731 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 ESYT1Q9BSJ8 1104 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 CWH43Q9H720 699 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 TLE6Q9H808 572 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 RIC8AQ9NPQ8 531 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 TYW1Q9NV66 732 aaKnown RBP14.69□□□□□ -0.06
LINC00339-203ENST00000420503 ST3GAL5Q9UNP4 418 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 SQORQ9Y6N5 450 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 MYO10Q9HD67 2058 aa14.69□□□□□ -0.06
LINC00339-203ENST00000420503 WDR81Q562E7 1941 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 HIDE1A8MVS5 230 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 MEIS1O00470 390 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 BACH1O14867 736 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 FSCN2O14926 492 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 DHX15O43143 795 aaKnown RBP14.68□□□□□ -0.06
LINC00339-203ENST00000420503 RPS6KA5O75582 802 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 CBX2Q14781 532 aaPredicted RBP14.68□□□□□ -0.06
LINC00339-203ENST00000420503 DUSP6Q16828 381 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 JAKMIP3Q5VZ66 844 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 PLPP4Q5VZY2 271 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 LLGL2Q6P1M3 1020 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 APOA5Q6Q788 366 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 SUSD6Q92537 303 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 MFSD14AQ96MC6 490 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 SMOC2Q9H3U7 446 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 TLR9Q9NR96 1032 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 FAM217BQ9NTX9 383 aaPredicted RBP14.68□□□□□ -0.06
LINC00339-203ENST00000420503 PCDHB7Q9Y5E2 793 aa14.68□□□□□ -0.06
LINC00339-203ENST00000420503 V9GY48 417 aaPredicted RBP14.68□□□□□ -0.06
LINC00339-203ENST00000420503 MYH9P35579 1960 aaKnown RBP14.67□□□□□ -0.06
LINC00339-203ENST00000420503 MAFGO15525 162 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 C22orf31O95567 290 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 CALM1P0DP23 149 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 CALM2P0DP24 149 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 CALM3P0DP25 149 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 CDC27P30260 824 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 SREBF1P36956 1147 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 CLK2P49760 499 aaKnown RBP14.67□□□□□ -0.06
LINC00339-203ENST00000420503 CLCN3P51790 818 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 ADCY7P51828 1080 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 ADCK5Q3MIX3 580 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 NAALADL2Q58DX5 795 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 SWSAP1Q6NVH7 229 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 SYCE2Q6PIF2 218 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 SGMS1Q86VZ5 419 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 THNSL1Q8IYQ7 743 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 ASIC4Q96FT7 647 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 MTA3Q9BTC8 594 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 RGS18Q9NS28 235 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 USP34Q70CQ2 3546 aa14.67□□□□□ -0.06
LINC00339-203ENST00000420503 IGLV3-22A0A075B6J6 115 aa14.66□□□□□ -0.06
LINC00339-203ENST00000420503 DENND3A2RUS2 1198 aa14.66□□□□□ -0.06
LINC00339-203ENST00000420503 SMCO2A6NFE2 343 aa14.66□□□□□ -0.06
LINC00339-203ENST00000420503 GPR32O75388 356 aa14.66□□□□□ -0.06
LINC00339-203ENST00000420503 CPA1P15085 419 aa14.66□□□□□ -0.06
LINC00339-203ENST00000420503 KCNC3Q14003 757 aa14.66□□□□□ -0.06
LINC00339-203ENST00000420503 DSC3Q14574 896 aa14.66□□□□□ -0.06
LINC00339-203ENST00000420503 RTN1Q16799 776 aa14.66□□□□□ -0.06
LINC00339-203ENST00000420503 PDXDC2PQ6P474 469 aa14.66□□□□□ -0.06
LINC00339-203ENST00000420503 PLA2G4DQ86XP0 818 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms