RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 TTC14Q96N46 770 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 MMP19Q99542 508 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 ZFYVE1Q9HBF4 777 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 RAVER2Q9HCJ3 691 aaKnown RBP8.11□□□□□ -1.11
HMGN1-205ENST00000419378 SOX13Q9UN79 622 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 RIPK3Q9Y572 518 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 DNAH12Q6ZR08 3092 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 RANBP2P49792 3224 aaKnown RBP8.1□□□□□ -1.11
HMGN1-205ENST00000419378 M0R082 166 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 ATP2A1O14983 1001 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 PLA2G6O60733 806 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 FARP2O94887 1054 aaPredicted RBP8.1□□□□□ -1.11
HMGN1-205ENST00000419378 PGK2P07205 417 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 CELA2BP08218 269 aaPredicted RBP8.1□□□□□ -1.11
HMGN1-205ENST00000419378 CYP21A2P08686 494 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 PDHBP11177 359 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 CDC27P30260 824 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 CCND3P30281 292 aaPredicted RBP8.1□□□□□ -1.11
HMGN1-205ENST00000419378 CYP2C19P33261 490 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 OAZ1P54368 228 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 RAD51AP2Q09MP3 1159 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 FAAP100Q0VG06 881 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 KCTD2Q14681 263 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 CCDC85BQ15834 202 aaPredicted RBP8.1□□□□□ -1.11
HMGN1-205ENST00000419378 MFSD14CQ5VZR4 134 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 OLFML2BQ68BL8 750 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 KANK3Q6NY19 840 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 HS2ST1Q7LGA3 356 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 UBE2Q1Q7Z7E8 422 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 IQCA1Q86XH1 822 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 DGKHQ86XP1 1220 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 CPXCR1Q8N123 301 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 ZNF417Q8TAU3 575 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 WHAMMQ8TF30 809 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 CHURC1Q8WUH1 139 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 MAML3Q96JK9 1138 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 ZNF587Q96SQ5 575 aaPredicted RBP8.1□□□□□ -1.11
HMGN1-205ENST00000419378 KRT23Q9C075 422 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 CLEC4MQ9H2X3 399 aaPredicted RBP8.1□□□□□ -1.11
HMGN1-205ENST00000419378 CNNM2Q9H8M5 875 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 SLC5A4Q9NY91 659 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 GGT7Q9UJ14 662 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 CTDP1Q9Y5B0 961 aaPredicted RBP8.1□□□□□ -1.11
HMGN1-205ENST00000419378 TAF6LQ9Y6J9 622 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 FRMPD3Q5JV73 1810 aa8.1□□□□□ -1.11
HMGN1-205ENST00000419378 ZNF536O15090 1300 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 TNKSO95271 1327 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 FRMPD2Q68DX3 1309 aaPredicted RBP8.09□□□□□ -1.11
HMGN1-205ENST00000419378 PLXNA1Q9UIW2 1896 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 LILRB5O75023 590 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 TFRCP02786 760 aaKnown RBP8.09□□□□□ -1.11
HMGN1-205ENST00000419378 SNHG28P0DPA3 235 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 CAPN2P17655 700 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 AMPD1P23109 780 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 CDC25BP30305 580 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 AFF1P51825 1210 aaKnown RBP8.09□□□□□ -1.11
HMGN1-205ENST00000419378 SNAP25P60880 206 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 PCDH1Q08174 1060 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 ZNF792Q3KQV3 632 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 CCDC178Q5BJE1 867 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 RPS26P11Q5JNZ5 115 aaPredicted RBP8.09□□□□□ -1.11
HMGN1-205ENST00000419378 TTBK2Q6IQ55 1244 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 CCDC174Q6PII3 467 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 TREML4Q6UXN2 200 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 IL22RA1Q8N6P7 574 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 ENAHQ8N8S7 591 aaPredicted RBP8.09□□□□□ -1.11
HMGN1-205ENST00000419378 TRPV1Q8NER1 839 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 TRIM56Q9BRZ2 755 aaKnown RBP8.09□□□□□ -1.11
HMGN1-205ENST00000419378 NOC4LQ9BVI4 516 aaKnown RBP8.09□□□□□ -1.11
HMGN1-205ENST00000419378 KAT14Q9H8E8 782 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 ZSWIM5Q9P217 1185 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 GPN3Q9UHW5 284 aaPredicted RBP8.09□□□□□ -1.11
HMGN1-205ENST00000419378 RBM8AQ9Y5S9 174 aaKnown RBP8.09□□□□□ -1.11
HMGN1-205ENST00000419378 CEP290O15078 2479 aa8.09□□□□□ -1.11
HMGN1-205ENST00000419378 ZNFX1Q9P2E3 1918 aaKnown RBP8.09□□□□□ -1.11
HMGN1-205ENST00000419378 DNAJC25-GNG10A0A024R161 153 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 CELA3AP09093 270 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 GOLGA8HP0CJ92 632 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 CYBAP13498 195 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 EPHA1P21709 976 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 SLC16A2P36021 539 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 ZNF543Q08ER8 600 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 TRDNQ13061 729 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 ZNF423Q2M1K9 1284 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 ZNF394Q53GI3 561 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 SYDE2Q5VT97 1194 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 BTNL9Q6UXG8 535 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 STOX1Q6ZVD7 989 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 SV2BQ7L1I2 683 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 CYB5R4Q7L1T6 521 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 CHST13Q8NET6 341 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 DIS3LQ8TF46 1054 aaKnown RBP8.08□□□□□ -1.12
HMGN1-205ENST00000419378 ANKS1AQ92625 1134 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 MAP4K1Q92918 833 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 UBAC1Q9BSL1 405 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 CEP44Q9C0F1 390 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 LSG1Q9H089 658 aaKnown RBP8.08□□□□□ -1.12
HMGN1-205ENST00000419378 RANBP17Q9H2T7 1088 aaKnown RBP8.08□□□□□ -1.12
HMGN1-205ENST00000419378 ACAD9Q9H845 621 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 HOMER2Q9NSB8 354 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms