RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 RWDD2AQ9UIY3 292 aa6.62□□□□□ -1.35
HMGB3-202ENST00000419110 RABGEF1Q9UJ41 708 aa6.62□□□□□ -1.35
HMGB3-202ENST00000419110 DBR1Q9UK59 544 aaKnown RBP6.62□□□□□ -1.35
HMGB3-202ENST00000419110 ODF2LQ9ULJ1 636 aa6.62□□□□□ -1.35
HMGB3-202ENST00000419110 GDAQ9Y2T3 454 aa6.62□□□□□ -1.35
HMGB3-202ENST00000419110 PCDHA10Q9Y5I2 948 aa6.62□□□□□ -1.35
HMGB3-202ENST00000419110 EMSYQ7Z589 1322 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 FRMD3A2A2Y4 597 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 FAM155AB1AL88 458 aaPredicted RBP6.61□□□□□ -1.35
HMGB3-202ENST00000419110 TNPO2O14787 897 aaKnown RBP6.61□□□□□ -1.35
HMGB3-202ENST00000419110 DHX15O43143 795 aaKnown RBP6.61□□□□□ -1.35
HMGB3-202ENST00000419110 KLRC4O43908 158 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 USO1O60763 962 aaKnown RBP6.61□□□□□ -1.35
HMGB3-202ENST00000419110 FARP2O94887 1054 aaPredicted RBP6.61□□□□□ -1.35
HMGB3-202ENST00000419110 LYPLA2O95372 231 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 GGPS1O95749 300 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 CCNE2O96020 404 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 TPM2P07951 284 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 TGFB3P10600 412 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 COL9A1P20849 921 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 YWHABP31946 246 aaKnown RBP6.61□□□□□ -1.35
HMGB3-202ENST00000419110 RGS2P41220 211 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 ACTR2P61160 394 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 PSMD2Q13200 908 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 CRHR2Q13324 411 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 ALCAMQ13740 583 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 ECM1Q16610 540 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 PROX2Q3B8N5 592 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.61□□□□□ -1.35
HMGB3-202ENST00000419110 SFR1Q86XK3 245 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 C4orf19Q8IY42 314 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 SMYD4Q8IYR2 804 aaPredicted RBP6.61□□□□□ -1.35
HMGB3-202ENST00000419110 MSL3Q8N5Y2 521 aaKnown RBP6.61□□□□□ -1.35
HMGB3-202ENST00000419110 ENOX1Q8TC92 643 aaKnown RBP6.61□□□□□ -1.35
HMGB3-202ENST00000419110 MORC4Q8TE76 937 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 NOC3LQ8WTT2 800 aaKnown RBP6.61□□□□□ -1.35
HMGB3-202ENST00000419110 NELFBQ8WX92 580 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 DHTKD1Q96HY7 919 aaPredicted RBP6.61□□□□□ -1.35
HMGB3-202ENST00000419110 FGD4Q96M96 766 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 DRC1Q96MC2 740 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 PTPN18Q99952 460 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 HSD17B14Q9BPX1 270 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 RUSC1Q9BVN2 902 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 TRIM5Q9C035 493 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 PARVGQ9HBI0 331 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 PANK4Q9NVE7 773 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 MAGEC2Q9UBF1 373 aaPredicted RBP6.61□□□□□ -1.35
HMGB3-202ENST00000419110 GABBR1Q9UBS5 961 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 SEL1LQ9UBV2 794 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 DIS3Q9Y2L1 958 aaKnown RBP6.61□□□□□ -1.35
HMGB3-202ENST00000419110 NFE2L3Q9Y4A8 694 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 COL4A3BPQ9Y5P4 624 aa6.61□□□□□ -1.35
HMGB3-202ENST00000419110 RASSF10A6NK89 507 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 K7ENM7 598 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 DPYSL4O14531 572 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 TLR2O60603 784 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 RGS20O76081 388 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 ADCY5O95622 1261 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 FGFR1OPO95684 399 aaKnown RBP6.6□□□□□ -1.35
HMGB3-202ENST00000419110 SERPINC1P01008 464 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 OATP04181 439 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 BMP6P22004 513 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 GUCY2CP25092 1073 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 YY1P25490 414 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 CDC25BP30305 580 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 ZNF75DP51815 510 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 FCGRTP55899 365 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 LRRC63Q05C16 580 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 RAD51AP2Q09MP3 1159 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 MAP2K5Q13163 448 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 IRF5Q13568 498 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 UGCGQ16739 394 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 Q3C1V9 767 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 ZNF792Q3KQV3 632 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 HERC4Q5GLZ8 1057 aaPredicted RBP6.6□□□□□ -1.35
HMGB3-202ENST00000419110 SPATA1Q5VX52 437 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 CYP4F22Q6NT55 531 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 CYFIP1Q7L576 1253 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 OTUD6AQ7L8S5 288 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 EEPD1Q7L9B9 569 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 CCDC60Q8IWA6 550 aaPredicted RBP6.6□□□□□ -1.35
HMGB3-202ENST00000419110 DRC7Q8IY82 874 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 MYOCDQ8IZQ8 938 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 ADSSL1Q8N142 457 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 GUF1Q8N442 669 aaKnown RBP6.6□□□□□ -1.35
HMGB3-202ENST00000419110 KIAA0895Q8NCT3 520 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 SLC17A8Q8NDX2 589 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 MCPH1Q8NEM0 835 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 PIGOQ8TEQ8 1089 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 P2RX5Q93086 422 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 DNAJC19Q96DA6 116 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 MRFAP1L1Q96HT8 127 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 MAML3Q96JK9 1138 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 PDLIM2Q96JY6 352 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 CAPNS2Q96L46 248 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 CTAGE1Q96RT6 745 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 PPP1R9BQ96SB3 815 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 EPAS1Q99814 870 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 AZI2Q9H6S1 392 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 MLXIPQ9HAP2 919 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms